Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.57■■■□□ 2.32
TRIM60Q495X7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC29.57■■■□□ 2.32
TRIM60Q495X7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC29.56■■■□□ 2.32
TRIM60Q495X7 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.56■■■□□ 2.32
TRIM60Q495X7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.55■■■□□ 2.32
TRIM60Q495X7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC29.54■■■□□ 2.32
TRIM60Q495X7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
TRIM60Q495X7 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.53■■■□□ 2.32
TRIM60Q495X7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
TRIM60Q495X7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
TRIM60Q495X7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
TRIM60Q495X7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
TRIM60Q495X7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC29.5■■■□□ 2.31
TRIM60Q495X7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
TRIM60Q495X7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
TRIM60Q495X7 ABHD17AP5-201ENST00000580133 923 ntBASIC29.5■■■□□ 2.31
TRIM60Q495X7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
TRIM60Q495X7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
TRIM60Q495X7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
TRIM60Q495X7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
TRIM60Q495X7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
TRIM60Q495X7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC29.49■■■□□ 2.31
TRIM60Q495X7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
TRIM60Q495X7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
TRIM60Q495X7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC29.47■■■□□ 2.31
TRIM60Q495X7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
TRIM60Q495X7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
TRIM60Q495X7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
TRIM60Q495X7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC29.46■■■□□ 2.31
TRIM60Q495X7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
TRIM60Q495X7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC29.45■■■□□ 2.3
TRIM60Q495X7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
TRIM60Q495X7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
TRIM60Q495X7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.43■■■□□ 2.3
TRIM60Q495X7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
TRIM60Q495X7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
TRIM60Q495X7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
TRIM60Q495X7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
TRIM60Q495X7 GPX1-201ENST00000419349 1106 ntBASIC29.41■■■□□ 2.3
TRIM60Q495X7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC29.41■■■□□ 2.3
TRIM60Q495X7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.41■■■□□ 2.3
TRIM60Q495X7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
TRIM60Q495X7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC29.4■■■□□ 2.3
TRIM60Q495X7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.39■■■□□ 2.3
TRIM60Q495X7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC29.39■■■□□ 2.3
TRIM60Q495X7 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
TRIM60Q495X7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
TRIM60Q495X7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC29.37■■■□□ 2.29
TRIM60Q495X7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
TRIM60Q495X7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
TRIM60Q495X7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC29.36■■■□□ 2.29
TRIM60Q495X7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC29.35■■■□□ 2.29
TRIM60Q495X7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC29.34■■■□□ 2.29
TRIM60Q495X7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
TRIM60Q495X7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
TRIM60Q495X7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC29.33■■■□□ 2.29
TRIM60Q495X7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
TRIM60Q495X7 RNF126P1-201ENST00000567452 1320 ntBASIC29.33■■■□□ 2.29
TRIM60Q495X7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
TRIM60Q495X7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC29.32■■■□□ 2.28
TRIM60Q495X7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
TRIM60Q495X7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC29.3■■■□□ 2.28
TRIM60Q495X7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
TRIM60Q495X7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
TRIM60Q495X7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.29■■■□□ 2.28
TRIM60Q495X7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
TRIM60Q495X7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC29.28■■■□□ 2.28
TRIM60Q495X7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
TRIM60Q495X7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
TRIM60Q495X7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC29.27■■■□□ 2.28
TRIM60Q495X7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
TRIM60Q495X7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC29.25■■■□□ 2.27
TRIM60Q495X7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
TRIM60Q495X7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC29.24■■■□□ 2.27
TRIM60Q495X7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
TRIM60Q495X7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC29.23■■■□□ 2.27
TRIM60Q495X7 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
TRIM60Q495X7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC29.21■■■□□ 2.27
TRIM60Q495X7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
TRIM60Q495X7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
TRIM60Q495X7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
TRIM60Q495X7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC29.21■■■□□ 2.27
TRIM60Q495X7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC29.21■■■□□ 2.27
TRIM60Q495X7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
TRIM60Q495X7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC29.2■■■□□ 2.26
TRIM60Q495X7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
TRIM60Q495X7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC29.2■■■□□ 2.26
TRIM60Q495X7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
TRIM60Q495X7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
TRIM60Q495X7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
TRIM60Q495X7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.17■■■□□ 2.26
TRIM60Q495X7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC29.15■■■□□ 2.26
TRIM60Q495X7 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.15■■■□□ 2.26
TRIM60Q495X7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC29.15■■■□□ 2.26
TRIM60Q495X7 NTF6A-201ENST00000591175 560 ntBASIC29.15■■■□□ 2.26
TRIM60Q495X7 AC012354.3-201ENST00000623734 483 ntBASIC29.14■■■□□ 2.26
TRIM60Q495X7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.13■■■□□ 2.25
TRIM60Q495X7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
TRIM60Q495X7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
TRIM60Q495X7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms