Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01559Q495D7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01559Q495D7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01559Q495D7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01559Q495D7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01559Q495D7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01559Q495D7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
LINC01559Q495D7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
LINC01559Q495D7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC01559Q495D7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01559Q495D7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.41■□□□□ 0.7
LINC01559Q495D7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.41■□□□□ 0.7
LINC01559Q495D7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01559Q495D7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01559Q495D7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01559Q495D7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01559Q495D7 DRD5P2-201ENST00000421395 2012 ntBASIC19.41■□□□□ 0.7
LINC01559Q495D7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
LINC01559Q495D7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01559Q495D7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01559Q495D7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01559Q495D7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.4■□□□□ 0.7
LINC01559Q495D7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.39■□□□□ 0.69
LINC01559Q495D7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC01559Q495D7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LINC01559Q495D7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01559Q495D7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01559Q495D7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC01559Q495D7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
LINC01559Q495D7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.35■□□□□ 0.69
LINC01559Q495D7 WASH5P-204ENST00000632292 975 ntBASIC19.35■□□□□ 0.69
LINC01559Q495D7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC01559Q495D7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LINC01559Q495D7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LINC01559Q495D7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LINC01559Q495D7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC01559Q495D7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC01559Q495D7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.31■□□□□ 0.68
LINC01559Q495D7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC01559Q495D7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
LINC01559Q495D7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LINC01559Q495D7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC01559Q495D7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC01559Q495D7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC01559Q495D7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.29■□□□□ 0.68
LINC01559Q495D7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.29■□□□□ 0.68
LINC01559Q495D7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC01559Q495D7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
LINC01559Q495D7 AP002365.1-201ENST00000603448 772 ntBASIC19.29■□□□□ 0.68
LINC01559Q495D7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.29■□□□□ 0.68
LINC01559Q495D7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC01559Q495D7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LINC01559Q495D7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01559Q495D7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01559Q495D7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01559Q495D7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01559Q495D7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01559Q495D7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01559Q495D7 AL121749.1-202ENST00000609313 2153 ntBASIC19.27■□□□□ 0.68
LINC01559Q495D7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINC01559Q495D7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINC01559Q495D7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINC01559Q495D7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LINC01559Q495D7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.26■□□□□ 0.67
LINC01559Q495D7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.25■□□□□ 0.67
LINC01559Q495D7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC01559Q495D7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
LINC01559Q495D7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.25■□□□□ 0.67
LINC01559Q495D7 AC010864.1-201ENST00000609407 1511 ntBASIC19.25■□□□□ 0.67
LINC01559Q495D7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC01559Q495D7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01559Q495D7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01559Q495D7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LINC01559Q495D7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.24■□□□□ 0.67
LINC01559Q495D7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
LINC01559Q495D7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC01559Q495D7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LINC01559Q495D7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC01559Q495D7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC01559Q495D7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LINC01559Q495D7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LINC01559Q495D7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC01559Q495D7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC01559Q495D7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC01559Q495D7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LINC01559Q495D7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC01559Q495D7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
LINC01559Q495D7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC01559Q495D7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC01559Q495D7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.19■□□□□ 0.66
LINC01559Q495D7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LINC01559Q495D7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LINC01559Q495D7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LINC01559Q495D7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.19■□□□□ 0.66
LINC01559Q495D7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC01559Q495D7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
LINC01559Q495D7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LINC01559Q495D7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC01559Q495D7 AL133380.1-201ENST00000506013 324 ntBASIC19.17■□□□□ 0.66
LINC01559Q495D7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms