Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CMC4P56277 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.58■□□□□ 0.72
CMC4P56277 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CMC4P56277 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CMC4P56277 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CMC4P56277 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CMC4P56277 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CMC4P56277 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CMC4P56277 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CMC4P56277 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CMC4P56277 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.56■□□□□ 0.72
CMC4P56277 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CMC4P56277 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CMC4P56277 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CMC4P56277 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CMC4P56277 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CMC4P56277 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CMC4P56277 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CMC4P56277 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CMC4P56277 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CMC4P56277 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CMC4P56277 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CMC4P56277 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CMC4P56277 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CMC4P56277 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CMC4P56277 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CMC4P56277 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CMC4P56277 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CMC4P56277 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CMC4P56277 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.51■□□□□ 0.71
CMC4P56277 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CMC4P56277 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CMC4P56277 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.49■□□□□ 0.71
CMC4P56277 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.49■□□□□ 0.71
CMC4P56277 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CMC4P56277 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.49■□□□□ 0.71
CMC4P56277 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CMC4P56277 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.48■□□□□ 0.71
CMC4P56277 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.48■□□□□ 0.71
CMC4P56277 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.48■□□□□ 0.71
CMC4P56277 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CMC4P56277 DUX4L29-201ENST00000425409 679 ntBASIC19.47■□□□□ 0.71
CMC4P56277 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.46■□□□□ 0.71
CMC4P56277 MIR6090-201ENST00000622481 60 ntBASIC19.46■□□□□ 0.71
CMC4P56277 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.45■□□□□ 0.7
CMC4P56277 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.45■□□□□ 0.7
CMC4P56277 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CMC4P56277 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CMC4P56277 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CMC4P56277 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CMC4P56277 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CMC4P56277 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CMC4P56277 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CMC4P56277 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CMC4P56277 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CMC4P56277 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.43■□□□□ 0.7
CMC4P56277 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CMC4P56277 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CMC4P56277 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CMC4P56277 ST7-AS1-201ENST00000456775 1889 ntBASIC19.41■□□□□ 0.7
CMC4P56277 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CMC4P56277 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CMC4P56277 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.41■□□□□ 0.7
CMC4P56277 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.41■□□□□ 0.7
CMC4P56277 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.41■□□□□ 0.7
CMC4P56277 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CMC4P56277 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CMC4P56277 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CMC4P56277 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.4■□□□□ 0.7
CMC4P56277 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.39■□□□□ 0.69
CMC4P56277 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.39■□□□□ 0.69
CMC4P56277 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CMC4P56277 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
CMC4P56277 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CMC4P56277 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CMC4P56277 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CMC4P56277 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.39■□□□□ 0.69
CMC4P56277 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CMC4P56277 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CMC4P56277 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMC4P56277 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMC4P56277 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMC4P56277 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMC4P56277 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMC4P56277 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMC4P56277 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CMC4P56277 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMC4P56277 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CMC4P56277 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.36■□□□□ 0.69
CMC4P56277 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CMC4P56277 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.36■□□□□ 0.69
CMC4P56277 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
CMC4P56277 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.36■□□□□ 0.69
CMC4P56277 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CMC4P56277 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.35■□□□□ 0.69
CMC4P56277 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.35■□□□□ 0.69
CMC4P56277 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CMC4P56277 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.34■□□□□ 0.69
CMC4P56277 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CMC4P56277 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms