Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC33.29■■■□□ 2.92
CHRNA5P30532 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC33.29■■■□□ 2.92
CHRNA5P30532 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
CHRNA5P30532 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC33.28■■■□□ 2.92
CHRNA5P30532 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
CHRNA5P30532 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC33.26■■■□□ 2.92
CHRNA5P30532 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC33.26■■■□□ 2.91
CHRNA5P30532 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC33.25■■■□□ 2.91
CHRNA5P30532 CHML-204ENST00000638121 920 ntTSL 2 BASIC33.25■■■□□ 2.91
CHRNA5P30532 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
CHRNA5P30532 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC33.23■■■□□ 2.91
CHRNA5P30532 ABHD17AP5-201ENST00000580133 923 ntBASIC33.23■■■□□ 2.91
CHRNA5P30532 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
CHRNA5P30532 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
CHRNA5P30532 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
CHRNA5P30532 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
CHRNA5P30532 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
CHRNA5P30532 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC33.21■■■□□ 2.91
CHRNA5P30532 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
CHRNA5P30532 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
CHRNA5P30532 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
CHRNA5P30532 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
CHRNA5P30532 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC33.21■■■□□ 2.91
CHRNA5P30532 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC33.21■■■□□ 2.91
CHRNA5P30532 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC33.21■■■□□ 2.91
CHRNA5P30532 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC33.21■■■□□ 2.91
CHRNA5P30532 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
CHRNA5P30532 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
CHRNA5P30532 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
CHRNA5P30532 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC33.19■■■□□ 2.9
CHRNA5P30532 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
CHRNA5P30532 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC33.18■■■□□ 2.9
CHRNA5P30532 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
CHRNA5P30532 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
CHRNA5P30532 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC33.16■■■□□ 2.9
CHRNA5P30532 GPX1-201ENST00000419349 1106 ntBASIC33.15■■■□□ 2.9
CHRNA5P30532 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC33.14■■■□□ 2.9
CHRNA5P30532 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
CHRNA5P30532 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC33.13■■■□□ 2.89
CHRNA5P30532 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
CHRNA5P30532 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
CHRNA5P30532 EI24-212ENST00000615917 1407 ntTSL 2 BASIC33.11■■■□□ 2.89
CHRNA5P30532 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC33.1■■■□□ 2.89
CHRNA5P30532 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
CHRNA5P30532 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC33.1■■■□□ 2.89
CHRNA5P30532 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CHRNA5P30532 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CHRNA5P30532 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC33.08■■■□□ 2.89
CHRNA5P30532 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC33.07■■■□□ 2.88
CHRNA5P30532 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
CHRNA5P30532 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
CHRNA5P30532 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
CHRNA5P30532 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC33.04■■■□□ 2.88
CHRNA5P30532 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC33.04■■■□□ 2.88
CHRNA5P30532 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC33.04■■■□□ 2.88
CHRNA5P30532 RNF126P1-201ENST00000567452 1320 ntBASIC33.03■■■□□ 2.88
CHRNA5P30532 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC33.03■■■□□ 2.88
CHRNA5P30532 CHST11-202ENST00000546689 756 ntTSL 2 BASIC33.03■■■□□ 2.88
CHRNA5P30532 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC33.02■■■□□ 2.88
CHRNA5P30532 TPT1-202ENST00000379055 948 ntTSL 2 BASIC33.01■■■□□ 2.87
CHRNA5P30532 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC33.01■■■□□ 2.87
CHRNA5P30532 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC33■■■□□ 2.87
CHRNA5P30532 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC33■■■□□ 2.87
CHRNA5P30532 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC32.99■■■□□ 2.87
CHRNA5P30532 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC32.99■■■□□ 2.87
CHRNA5P30532 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
CHRNA5P30532 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC32.99■■■□□ 2.87
CHRNA5P30532 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CHRNA5P30532 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC32.98■■■□□ 2.87
CHRNA5P30532 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC32.97■■■□□ 2.87
CHRNA5P30532 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
CHRNA5P30532 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
CHRNA5P30532 CEP120-209ENST00000515110 606 ntTSL 3 BASIC32.95■■■□□ 2.87
CHRNA5P30532 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC32.93■■■□□ 2.86
CHRNA5P30532 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC32.93■■■□□ 2.86
CHRNA5P30532 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
CHRNA5P30532 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC32.92■■■□□ 2.86
CHRNA5P30532 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC32.91■■■□□ 2.86
CHRNA5P30532 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC32.91■■■□□ 2.86
CHRNA5P30532 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC32.9■■■□□ 2.86
CHRNA5P30532 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC32.88■■■□□ 2.85
CHRNA5P30532 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC32.88■■■□□ 2.85
CHRNA5P30532 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC32.88■■■□□ 2.85
CHRNA5P30532 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
CHRNA5P30532 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC32.87■■■□□ 2.85
CHRNA5P30532 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC32.86■■■□□ 2.85
CHRNA5P30532 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CHRNA5P30532 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
CHRNA5P30532 NTF6A-201ENST00000591175 560 ntBASIC32.85■■■□□ 2.85
CHRNA5P30532 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC32.84■■■□□ 2.85
CHRNA5P30532 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
CHRNA5P30532 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
CHRNA5P30532 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
CHRNA5P30532 AC012354.3-201ENST00000623734 483 ntBASIC32.83■■■□□ 2.85
CHRNA5P30532 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
CHRNA5P30532 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC32.81■■■□□ 2.84
CHRNA5P30532 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
CHRNA5P30532 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
CHRNA5P30532 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC32.79■■■□□ 2.84
CHRNA5P30532 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC32.79■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms