Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 LINC01971-201ENST00000617888 1048 ntBASIC20.59■□□□□ 0.89
CD28P10747 AL161658.1-201ENST00000623641 1967 ntBASIC20.59■□□□□ 0.89
CD28P10747 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CD28P10747 MIR3648-2-201ENST00000581792 180 ntBASIC20.58■□□□□ 0.89
CD28P10747 MIR3648-1-201ENST00000615959 180 ntBASIC20.58■□□□□ 0.89
CD28P10747 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.58■□□□□ 0.89
CD28P10747 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CD28P10747 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD28P10747 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD28P10747 MIR639-201ENST00000384974 98 ntBASIC20.57■□□□□ 0.88
CD28P10747 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.57■□□□□ 0.88
CD28P10747 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CD28P10747 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD28P10747 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD28P10747 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD28P10747 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD28P10747 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CD28P10747 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD28P10747 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD28P10747 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.55■□□□□ 0.88
CD28P10747 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD28P10747 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CD28P10747 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD28P10747 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.54■□□□□ 0.88
CD28P10747 MIR4449-201ENST00000578365 66 ntBASIC20.54■□□□□ 0.88
CD28P10747 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD28P10747 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CD28P10747 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.53■□□□□ 0.88
CD28P10747 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD28P10747 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD28P10747 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.53■□□□□ 0.88
CD28P10747 CR559946.2-201ENST00000623684 991 ntBASIC20.53■□□□□ 0.88
CD28P10747 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CD28P10747 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CD28P10747 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CD28P10747 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.52■□□□□ 0.88
CD28P10747 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CD28P10747 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD28P10747 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD28P10747 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
CD28P10747 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD28P10747 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.5■□□□□ 0.87
CD28P10747 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.48■□□□□ 0.87
CD28P10747 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CD28P10747 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CD28P10747 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.47■□□□□ 0.87
CD28P10747 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
CD28P10747 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CD28P10747 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CD28P10747 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CD28P10747 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD28P10747 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD28P10747 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD28P10747 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.45■□□□□ 0.86
CD28P10747 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CD28P10747 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.44■□□□□ 0.86
CD28P10747 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CD28P10747 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CD28P10747 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.44■□□□□ 0.86
CD28P10747 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
CD28P10747 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CD28P10747 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD28P10747 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD28P10747 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.43■□□□□ 0.86
CD28P10747 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CD28P10747 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD28P10747 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD28P10747 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.41■□□□□ 0.86
CD28P10747 DUX4L13-201ENST00000554103 1267 ntBASIC20.41■□□□□ 0.86
CD28P10747 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CD28P10747 DUX4L15-201ENST00000611059 1267 ntBASIC20.41■□□□□ 0.86
CD28P10747 DUX4L23-201ENST00000615195 1269 ntBASIC20.41■□□□□ 0.86
CD28P10747 DUX4L24-201ENST00000617576 1269 ntBASIC20.41■□□□□ 0.86
CD28P10747 DUX4L22-201ENST00000618238 1269 ntBASIC20.41■□□□□ 0.86
CD28P10747 DUX4L20-201ENST00000619712 1269 ntBASIC20.41■□□□□ 0.86
CD28P10747 DUX4L21-201ENST00000622058 1269 ntBASIC20.41■□□□□ 0.86
CD28P10747 DUX4L10-201ENST00000622460 1267 ntBASIC20.41■□□□□ 0.86
CD28P10747 DUX4L25-201ENST00000624915 1269 ntBASIC20.41■□□□□ 0.86
CD28P10747 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.4■□□□□ 0.86
CD28P10747 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.4■□□□□ 0.86
CD28P10747 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.4■□□□□ 0.86
CD28P10747 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CD28P10747 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CD28P10747 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CD28P10747 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CD28P10747 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CD28P10747 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD28P10747 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.38■□□□□ 0.85
CD28P10747 AC010864.1-201ENST00000609407 1511 ntBASIC20.37■□□□□ 0.85
CD28P10747 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.37■□□□□ 0.85
CD28P10747 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.37■□□□□ 0.85
CD28P10747 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD28P10747 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC20.36■□□□□ 0.85
CD28P10747 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CD28P10747 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.36■□□□□ 0.85
CD28P10747 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.36■□□□□ 0.85
CD28P10747 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD28P10747 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.36■□□□□ 0.85
CD28P10747 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CD28P10747 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms