Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RETP07949 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.68■■□□□ 1.86
RETP07949 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RETP07949 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
RETP07949 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.67■■□□□ 1.86
RETP07949 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.67■■□□□ 1.86
RETP07949 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RETP07949 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
RETP07949 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RETP07949 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RETP07949 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RETP07949 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.65■■□□□ 1.86
RETP07949 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
RETP07949 RARRES2P2-201ENST00000394842 485 ntBASIC26.63■■□□□ 1.85
RETP07949 DUX4L13-201ENST00000554103 1267 ntBASIC26.63■■□□□ 1.85
RETP07949 DUX4L15-201ENST00000611059 1267 ntBASIC26.63■■□□□ 1.85
RETP07949 DUX4L23-201ENST00000615195 1269 ntBASIC26.63■■□□□ 1.85
RETP07949 DUX4L24-201ENST00000617576 1269 ntBASIC26.63■■□□□ 1.85
RETP07949 DUX4L22-201ENST00000618238 1269 ntBASIC26.63■■□□□ 1.85
RETP07949 DUX4L20-201ENST00000619712 1269 ntBASIC26.63■■□□□ 1.85
RETP07949 DUX4L21-201ENST00000622058 1269 ntBASIC26.63■■□□□ 1.85
RETP07949 DUX4L10-201ENST00000622460 1267 ntBASIC26.63■■□□□ 1.85
RETP07949 DUX4L25-201ENST00000624915 1269 ntBASIC26.63■■□□□ 1.85
RETP07949 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RETP07949 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
RETP07949 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
RETP07949 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
RETP07949 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.61■■□□□ 1.85
RETP07949 ABHD17AP5-201ENST00000580133 923 ntBASIC26.61■■□□□ 1.85
RETP07949 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.6■■□□□ 1.85
RETP07949 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RETP07949 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RETP07949 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
RETP07949 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.59■■□□□ 1.85
RETP07949 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RETP07949 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RETP07949 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RETP07949 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.58■■□□□ 1.85
RETP07949 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
RETP07949 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RETP07949 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.57■■□□□ 1.84
RETP07949 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.56■■□□□ 1.84
RETP07949 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
RETP07949 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RETP07949 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RETP07949 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.55■■□□□ 1.84
RETP07949 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RETP07949 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RETP07949 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RETP07949 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RETP07949 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RETP07949 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.54■■□□□ 1.84
RETP07949 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
RETP07949 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RETP07949 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.54■■□□□ 1.84
RETP07949 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RETP07949 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RETP07949 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RETP07949 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RETP07949 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RETP07949 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RETP07949 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
RETP07949 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
RETP07949 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
RETP07949 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.51■■□□□ 1.83
RETP07949 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RETP07949 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
RETP07949 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.5■■□□□ 1.83
RETP07949 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.5■■□□□ 1.83
RETP07949 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RETP07949 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.5■■□□□ 1.83
RETP07949 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
RETP07949 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.49■■□□□ 1.83
RETP07949 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RETP07949 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.48■■□□□ 1.83
RETP07949 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RETP07949 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.48■■□□□ 1.83
RETP07949 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.48■■□□□ 1.83
RETP07949 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RETP07949 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
RETP07949 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
RETP07949 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
RETP07949 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
RETP07949 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.45■■□□□ 1.82
RETP07949 RNF126P1-201ENST00000567452 1320 ntBASIC26.43■■□□□ 1.82
RETP07949 GPX1-201ENST00000419349 1106 ntBASIC26.43■■□□□ 1.82
RETP07949 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.42■■□□□ 1.82
RETP07949 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
RETP07949 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
RETP07949 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RETP07949 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RETP07949 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RETP07949 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RETP07949 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RETP07949 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RETP07949 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.37■■□□□ 1.81
RETP07949 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RETP07949 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RETP07949 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RETP07949 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms