Protein–RNA interactions for Protein: P04818

TYMS, Thymidylate synthase, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TYMSP04818 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TYMSP04818 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TYMSP04818 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TYMSP04818 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TYMSP04818 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
TYMSP04818 ZNRF2P1-201ENST00000441407 443 ntBASIC20.18■□□□□ 0.82
TYMSP04818 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
TYMSP04818 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TYMSP04818 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TYMSP04818 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TYMSP04818 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TYMSP04818 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TYMSP04818 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TYMSP04818 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.16■□□□□ 0.82
TYMSP04818 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TYMSP04818 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC20.15■□□□□ 0.82
TYMSP04818 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TYMSP04818 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TYMSP04818 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TYMSP04818 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
TYMSP04818 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TYMSP04818 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TYMSP04818 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TYMSP04818 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TYMSP04818 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TYMSP04818 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TYMSP04818 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TYMSP04818 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TYMSP04818 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.11■□□□□ 0.81
TYMSP04818 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TYMSP04818 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TYMSP04818 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TYMSP04818 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TYMSP04818 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TYMSP04818 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.1■□□□□ 0.81
TYMSP04818 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.1■□□□□ 0.81
TYMSP04818 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TYMSP04818 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TYMSP04818 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TYMSP04818 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TYMSP04818 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TYMSP04818 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TYMSP04818 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
TYMSP04818 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.07■□□□□ 0.8
TYMSP04818 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TYMSP04818 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.06■□□□□ 0.8
TYMSP04818 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TYMSP04818 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TYMSP04818 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TYMSP04818 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.05■□□□□ 0.8
TYMSP04818 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.05■□□□□ 0.8
TYMSP04818 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.05■□□□□ 0.8
TYMSP04818 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TYMSP04818 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.05■□□□□ 0.8
TYMSP04818 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TYMSP04818 DRD5P2-201ENST00000421395 2012 ntBASIC20.04■□□□□ 0.8
TYMSP04818 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TYMSP04818 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.04■□□□□ 0.8
TYMSP04818 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.04■□□□□ 0.8
TYMSP04818 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TYMSP04818 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TYMSP04818 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TYMSP04818 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TYMSP04818 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TYMSP04818 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TYMSP04818 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.01■□□□□ 0.79
TYMSP04818 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TYMSP04818 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20■□□□□ 0.79
TYMSP04818 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TYMSP04818 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.98■□□□□ 0.79
TYMSP04818 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TYMSP04818 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
TYMSP04818 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.97■□□□□ 0.79
TYMSP04818 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TYMSP04818 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
TYMSP04818 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TYMSP04818 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TYMSP04818 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.95■□□□□ 0.78
TYMSP04818 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TYMSP04818 DYNLL1-208ENST00000550178 581 ntBASIC19.95■□□□□ 0.78
TYMSP04818 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TYMSP04818 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TYMSP04818 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.94■□□□□ 0.78
TYMSP04818 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TYMSP04818 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.94■□□□□ 0.78
TYMSP04818 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TYMSP04818 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TYMSP04818 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TYMSP04818 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TYMSP04818 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TYMSP04818 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TYMSP04818 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TYMSP04818 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TYMSP04818 AL449106.1-201ENST00000608517 1980 ntBASIC19.91■□□□□ 0.78
TYMSP04818 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
TYMSP04818 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TYMSP04818 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TYMSP04818 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TYMSP04818 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TYMSP04818 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms