Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PDGFAP04085 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
PDGFAP04085 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.52■■□□□ 1.52
PDGFAP04085 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDGFAP04085 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PDGFAP04085 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PDGFAP04085 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.49■■□□□ 1.51
PDGFAP04085 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PDGFAP04085 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
PDGFAP04085 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PDGFAP04085 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.48■■□□□ 1.51
PDGFAP04085 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PDGFAP04085 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
PDGFAP04085 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
PDGFAP04085 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
PDGFAP04085 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PDGFAP04085 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.46■■□□□ 1.51
PDGFAP04085 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
PDGFAP04085 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
PDGFAP04085 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PDGFAP04085 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PDGFAP04085 AC139426.1-201ENST00000568218 2529 ntBASIC24.44■■□□□ 1.5
PDGFAP04085 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PDGFAP04085 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PDGFAP04085 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
PDGFAP04085 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PDGFAP04085 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDGFAP04085 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
PDGFAP04085 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
PDGFAP04085 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PDGFAP04085 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PDGFAP04085 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.41■■□□□ 1.5
PDGFAP04085 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PDGFAP04085 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC24.41■■□□□ 1.5
PDGFAP04085 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PDGFAP04085 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.4■■□□□ 1.5
PDGFAP04085 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDGFAP04085 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
PDGFAP04085 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDGFAP04085 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PDGFAP04085 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.38■■□□□ 1.49
PDGFAP04085 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDGFAP04085 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.38■■□□□ 1.49
PDGFAP04085 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PDGFAP04085 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PDGFAP04085 DUX4L13-201ENST00000554103 1267 ntBASIC24.37■■□□□ 1.49
PDGFAP04085 DUX4L15-201ENST00000611059 1267 ntBASIC24.37■■□□□ 1.49
PDGFAP04085 DUX4L23-201ENST00000615195 1269 ntBASIC24.37■■□□□ 1.49
PDGFAP04085 DUX4L24-201ENST00000617576 1269 ntBASIC24.37■■□□□ 1.49
PDGFAP04085 DUX4L22-201ENST00000618238 1269 ntBASIC24.37■■□□□ 1.49
PDGFAP04085 DUX4L20-201ENST00000619712 1269 ntBASIC24.37■■□□□ 1.49
PDGFAP04085 DUX4L21-201ENST00000622058 1269 ntBASIC24.37■■□□□ 1.49
PDGFAP04085 DUX4L10-201ENST00000622460 1267 ntBASIC24.37■■□□□ 1.49
PDGFAP04085 DUX4L25-201ENST00000624915 1269 ntBASIC24.37■■□□□ 1.49
PDGFAP04085 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.36■■□□□ 1.49
PDGFAP04085 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.36■■□□□ 1.49
PDGFAP04085 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDGFAP04085 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
PDGFAP04085 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.35■■□□□ 1.49
PDGFAP04085 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.34■■□□□ 1.49
PDGFAP04085 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDGFAP04085 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC24.33■■□□□ 1.49
PDGFAP04085 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PDGFAP04085 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.33■■□□□ 1.49
PDGFAP04085 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PDGFAP04085 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.32■■□□□ 1.48
PDGFAP04085 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.31■■□□□ 1.48
PDGFAP04085 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDGFAP04085 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PDGFAP04085 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.3■■□□□ 1.48
PDGFAP04085 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.28■■□□□ 1.48
PDGFAP04085 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.28■■□□□ 1.48
PDGFAP04085 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDGFAP04085 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.27■■□□□ 1.48
PDGFAP04085 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PDGFAP04085 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PDGFAP04085 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.26■■□□□ 1.47
PDGFAP04085 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
PDGFAP04085 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PDGFAP04085 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
PDGFAP04085 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PDGFAP04085 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PDGFAP04085 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
PDGFAP04085 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDGFAP04085 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PDGFAP04085 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.24■■□□□ 1.47
PDGFAP04085 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDGFAP04085 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PDGFAP04085 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDGFAP04085 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.24■■□□□ 1.47
PDGFAP04085 AC120057.4-201ENST00000624722 1615 ntBASIC24.24■■□□□ 1.47
PDGFAP04085 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDGFAP04085 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PDGFAP04085 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PDGFAP04085 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
PDGFAP04085 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.22■■□□□ 1.47
PDGFAP04085 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.21■■□□□ 1.47
PDGFAP04085 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.21■■□□□ 1.47
PDGFAP04085 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.2■■□□□ 1.46
PDGFAP04085 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms