Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.27■■■□□ 2.44
HMGCRP04035 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
HMGCRP04035 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.25■■■□□ 2.43
HMGCRP04035 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
HMGCRP04035 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.24■■■□□ 2.43
HMGCRP04035 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.23■■■□□ 2.43
HMGCRP04035 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
HMGCRP04035 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.21■■■□□ 2.43
HMGCRP04035 RARRES2P2-201ENST00000394842 485 ntBASIC30.2■■■□□ 2.43
HMGCRP04035 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.2■■■□□ 2.42
HMGCRP04035 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
HMGCRP04035 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.19■■■□□ 2.42
HMGCRP04035 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.19■■■□□ 2.42
HMGCRP04035 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
HMGCRP04035 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.18■■■□□ 2.42
HMGCRP04035 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
HMGCRP04035 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.17■■■□□ 2.42
HMGCRP04035 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.16■■■□□ 2.42
HMGCRP04035 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
HMGCRP04035 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
HMGCRP04035 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.16■■■□□ 2.42
HMGCRP04035 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
HMGCRP04035 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
HMGCRP04035 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
HMGCRP04035 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
HMGCRP04035 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
HMGCRP04035 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
HMGCRP04035 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
HMGCRP04035 ABHD17AP5-201ENST00000580133 923 ntBASIC30.14■■■□□ 2.42
HMGCRP04035 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
HMGCRP04035 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
HMGCRP04035 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.13■■■□□ 2.41
HMGCRP04035 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
HMGCRP04035 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
HMGCRP04035 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
HMGCRP04035 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
HMGCRP04035 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.07■■■□□ 2.4
HMGCRP04035 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.06■■■□□ 2.4
HMGCRP04035 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
HMGCRP04035 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.06■■■□□ 2.4
HMGCRP04035 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.06■■■□□ 2.4
HMGCRP04035 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
HMGCRP04035 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.05■■■□□ 2.4
HMGCRP04035 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
HMGCRP04035 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
HMGCRP04035 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
HMGCRP04035 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
HMGCRP04035 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.04■■■□□ 2.4
HMGCRP04035 GPX1-201ENST00000419349 1106 ntBASIC30.03■■■□□ 2.4
HMGCRP04035 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.02■■■□□ 2.4
HMGCRP04035 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
HMGCRP04035 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
HMGCRP04035 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC30.01■■■□□ 2.39
HMGCRP04035 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC30.01■■■□□ 2.39
HMGCRP04035 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
HMGCRP04035 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30■■■□□ 2.39
HMGCRP04035 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30■■■□□ 2.39
HMGCRP04035 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
HMGCRP04035 RNF126P1-201ENST00000567452 1320 ntBASIC29.99■■■□□ 2.39
HMGCRP04035 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
HMGCRP04035 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
HMGCRP04035 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
HMGCRP04035 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC29.99■■■□□ 2.39
HMGCRP04035 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC29.98■■■□□ 2.39
HMGCRP04035 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
HMGCRP04035 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
HMGCRP04035 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
HMGCRP04035 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
HMGCRP04035 TPT1-202ENST00000379055 948 ntTSL 2 BASIC29.97■■■□□ 2.39
HMGCRP04035 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC29.97■■■□□ 2.39
HMGCRP04035 CHST11-202ENST00000546689 756 ntTSL 2 BASIC29.97■■■□□ 2.39
HMGCRP04035 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
HMGCRP04035 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
HMGCRP04035 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
HMGCRP04035 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.93■■■□□ 2.38
HMGCRP04035 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
HMGCRP04035 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.92■■■□□ 2.38
HMGCRP04035 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
HMGCRP04035 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
HMGCRP04035 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
HMGCRP04035 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
HMGCRP04035 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
HMGCRP04035 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC29.91■■■□□ 2.38
HMGCRP04035 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
HMGCRP04035 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC29.89■■■□□ 2.38
HMGCRP04035 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
HMGCRP04035 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
HMGCRP04035 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC29.88■■■□□ 2.37
HMGCRP04035 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
HMGCRP04035 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC29.87■■■□□ 2.37
HMGCRP04035 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC29.86■■■□□ 2.37
HMGCRP04035 CEP120-209ENST00000515110 606 ntTSL 3 BASIC29.86■■■□□ 2.37
HMGCRP04035 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
HMGCRP04035 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC29.85■■■□□ 2.37
HMGCRP04035 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
HMGCRP04035 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
HMGCRP04035 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC29.84■■■□□ 2.37
HMGCRP04035 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC29.84■■■□□ 2.37
HMGCRP04035 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC29.84■■■□□ 2.37
HMGCRP04035 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC29.84■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms