Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
RBFOX3A6NFN3 DRD5P2-201ENST00000421395 2012 ntBASIC20.83■□□□□ 0.93
RBFOX3A6NFN3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
RBFOX3A6NFN3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
RBFOX3A6NFN3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RBFOX3A6NFN3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RBFOX3A6NFN3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RBFOX3A6NFN3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RBFOX3A6NFN3 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RBFOX3A6NFN3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RBFOX3A6NFN3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.8■□□□□ 0.92
RBFOX3A6NFN3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.8■□□□□ 0.92
RBFOX3A6NFN3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RBFOX3A6NFN3 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
RBFOX3A6NFN3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RBFOX3A6NFN3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RBFOX3A6NFN3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RBFOX3A6NFN3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.77■□□□□ 0.92
RBFOX3A6NFN3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RBFOX3A6NFN3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RBFOX3A6NFN3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RBFOX3A6NFN3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RBFOX3A6NFN3 AL135925.1-201ENST00000605920 1701 ntBASIC20.75■□□□□ 0.91
RBFOX3A6NFN3 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RBFOX3A6NFN3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RBFOX3A6NFN3 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RBFOX3A6NFN3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RBFOX3A6NFN3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RBFOX3A6NFN3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RBFOX3A6NFN3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RBFOX3A6NFN3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RBFOX3A6NFN3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RBFOX3A6NFN3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.71■□□□□ 0.91
RBFOX3A6NFN3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RBFOX3A6NFN3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
RBFOX3A6NFN3 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RBFOX3A6NFN3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RBFOX3A6NFN3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RBFOX3A6NFN3 AL139393.2-201ENST00000608721 2025 ntBASIC20.7■□□□□ 0.9
RBFOX3A6NFN3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RBFOX3A6NFN3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RBFOX3A6NFN3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RBFOX3A6NFN3 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RBFOX3A6NFN3 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RBFOX3A6NFN3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RBFOX3A6NFN3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.68■□□□□ 0.9
RBFOX3A6NFN3 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RBFOX3A6NFN3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RBFOX3A6NFN3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.67■□□□□ 0.9
RBFOX3A6NFN3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RBFOX3A6NFN3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RBFOX3A6NFN3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RBFOX3A6NFN3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RBFOX3A6NFN3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RBFOX3A6NFN3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.65■□□□□ 0.9
RBFOX3A6NFN3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
RBFOX3A6NFN3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RBFOX3A6NFN3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RBFOX3A6NFN3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RBFOX3A6NFN3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.63■□□□□ 0.89
RBFOX3A6NFN3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RBFOX3A6NFN3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RBFOX3A6NFN3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.61■□□□□ 0.89
RBFOX3A6NFN3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RBFOX3A6NFN3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RBFOX3A6NFN3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RBFOX3A6NFN3 AL449106.1-201ENST00000608517 1980 ntBASIC20.61■□□□□ 0.89
RBFOX3A6NFN3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RBFOX3A6NFN3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RBFOX3A6NFN3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RBFOX3A6NFN3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RBFOX3A6NFN3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.6■□□□□ 0.89
RBFOX3A6NFN3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RBFOX3A6NFN3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
RBFOX3A6NFN3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RBFOX3A6NFN3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RBFOX3A6NFN3 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
RBFOX3A6NFN3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RBFOX3A6NFN3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RBFOX3A6NFN3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBFOX3A6NFN3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBFOX3A6NFN3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBFOX3A6NFN3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBFOX3A6NFN3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.56■□□□□ 0.88
RBFOX3A6NFN3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RBFOX3A6NFN3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RBFOX3A6NFN3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.56■□□□□ 0.88
RBFOX3A6NFN3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RBFOX3A6NFN3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RBFOX3A6NFN3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RBFOX3A6NFN3 INO80B-203ENST00000409917 796 ntTSL 2 BASIC20.55■□□□□ 0.88
RBFOX3A6NFN3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RBFOX3A6NFN3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RBFOX3A6NFN3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RBFOX3A6NFN3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RBFOX3A6NFN3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RBFOX3A6NFN3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.53■□□□□ 0.88
RBFOX3A6NFN3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RBFOX3A6NFN3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RBFOX3A6NFN3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms