Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
RBFOX3A6NFN3 DRD5P2-201ENST00000421395 2012 ntBASIC20.83■□□□□ 0.93
RBFOX3A6NFN3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
RBFOX3A6NFN3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
RBFOX3A6NFN3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RBFOX3A6NFN3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RBFOX3A6NFN3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RBFOX3A6NFN3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RBFOX3A6NFN3 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RBFOX3A6NFN3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RBFOX3A6NFN3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.8■□□□□ 0.92
RBFOX3A6NFN3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.8■□□□□ 0.92
RBFOX3A6NFN3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RBFOX3A6NFN3 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
RBFOX3A6NFN3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RBFOX3A6NFN3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RBFOX3A6NFN3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RBFOX3A6NFN3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.77■□□□□ 0.92
RBFOX3A6NFN3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RBFOX3A6NFN3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RBFOX3A6NFN3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RBFOX3A6NFN3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RBFOX3A6NFN3 AL135925.1-201ENST00000605920 1701 ntBASIC20.75■□□□□ 0.91
RBFOX3A6NFN3 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RBFOX3A6NFN3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RBFOX3A6NFN3 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RBFOX3A6NFN3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RBFOX3A6NFN3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RBFOX3A6NFN3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RBFOX3A6NFN3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RBFOX3A6NFN3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RBFOX3A6NFN3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RBFOX3A6NFN3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.71■□□□□ 0.91
RBFOX3A6NFN3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RBFOX3A6NFN3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
RBFOX3A6NFN3 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RBFOX3A6NFN3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RBFOX3A6NFN3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RBFOX3A6NFN3 AL139393.2-201ENST00000608721 2025 ntBASIC20.7■□□□□ 0.9
RBFOX3A6NFN3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RBFOX3A6NFN3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RBFOX3A6NFN3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RBFOX3A6NFN3 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RBFOX3A6NFN3 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RBFOX3A6NFN3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RBFOX3A6NFN3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.68■□□□□ 0.9
RBFOX3A6NFN3 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RBFOX3A6NFN3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RBFOX3A6NFN3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.67■□□□□ 0.9
RBFOX3A6NFN3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RBFOX3A6NFN3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RBFOX3A6NFN3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RBFOX3A6NFN3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RBFOX3A6NFN3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RBFOX3A6NFN3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.65■□□□□ 0.9
RBFOX3A6NFN3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
RBFOX3A6NFN3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RBFOX3A6NFN3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RBFOX3A6NFN3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RBFOX3A6NFN3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.63■□□□□ 0.89
RBFOX3A6NFN3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RBFOX3A6NFN3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RBFOX3A6NFN3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.61■□□□□ 0.89
RBFOX3A6NFN3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RBFOX3A6NFN3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RBFOX3A6NFN3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RBFOX3A6NFN3 AL449106.1-201ENST00000608517 1980 ntBASIC20.61■□□□□ 0.89
RBFOX3A6NFN3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RBFOX3A6NFN3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RBFOX3A6NFN3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RBFOX3A6NFN3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RBFOX3A6NFN3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.6■□□□□ 0.89
RBFOX3A6NFN3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RBFOX3A6NFN3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
RBFOX3A6NFN3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RBFOX3A6NFN3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RBFOX3A6NFN3 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
RBFOX3A6NFN3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RBFOX3A6NFN3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RBFOX3A6NFN3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBFOX3A6NFN3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBFOX3A6NFN3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBFOX3A6NFN3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBFOX3A6NFN3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.56■□□□□ 0.88
RBFOX3A6NFN3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RBFOX3A6NFN3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RBFOX3A6NFN3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.56■□□□□ 0.88
RBFOX3A6NFN3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RBFOX3A6NFN3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RBFOX3A6NFN3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RBFOX3A6NFN3 INO80B-203ENST00000409917 796 ntTSL 2 BASIC20.55■□□□□ 0.88
RBFOX3A6NFN3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RBFOX3A6NFN3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RBFOX3A6NFN3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RBFOX3A6NFN3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RBFOX3A6NFN3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RBFOX3A6NFN3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.53■□□□□ 0.88
RBFOX3A6NFN3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RBFOX3A6NFN3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RBFOX3A6NFN3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms