Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV8-1A0A0A6YYK1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAV8-1A0A0A6YYK1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV8-1A0A0A6YYK1 DRD5P2-201ENST00000421395 2012 ntBASIC19.85■□□□□ 0.77
TRAV8-1A0A0A6YYK1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV8-1A0A0A6YYK1 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.84■□□□□ 0.77
TRAV8-1A0A0A6YYK1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV8-1A0A0A6YYK1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV8-1A0A0A6YYK1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV8-1A0A0A6YYK1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV8-1A0A0A6YYK1 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAV8-1A0A0A6YYK1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV8-1A0A0A6YYK1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV8-1A0A0A6YYK1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
TRAV8-1A0A0A6YYK1 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV8-1A0A0A6YYK1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV8-1A0A0A6YYK1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV8-1A0A0A6YYK1 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV8-1A0A0A6YYK1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
TRAV8-1A0A0A6YYK1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TRAV8-1A0A0A6YYK1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV8-1A0A0A6YYK1 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV8-1A0A0A6YYK1 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV8-1A0A0A6YYK1 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
TRAV8-1A0A0A6YYK1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAV8-1A0A0A6YYK1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV8-1A0A0A6YYK1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV8-1A0A0A6YYK1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV8-1A0A0A6YYK1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TRAV8-1A0A0A6YYK1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAV8-1A0A0A6YYK1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV8-1A0A0A6YYK1 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV8-1A0A0A6YYK1 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV8-1A0A0A6YYK1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRAV8-1A0A0A6YYK1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV8-1A0A0A6YYK1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAV8-1A0A0A6YYK1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV8-1A0A0A6YYK1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV8-1A0A0A6YYK1 AP002365.1-201ENST00000603448 772 ntBASIC19.75■□□□□ 0.75
TRAV8-1A0A0A6YYK1 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV8-1A0A0A6YYK1 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV8-1A0A0A6YYK1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TRAV8-1A0A0A6YYK1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV8-1A0A0A6YYK1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV8-1A0A0A6YYK1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV8-1A0A0A6YYK1 AL121749.1-202ENST00000609313 2153 ntBASIC19.73■□□□□ 0.75
TRAV8-1A0A0A6YYK1 WASH5P-204ENST00000632292 975 ntBASIC19.73■□□□□ 0.75
TRAV8-1A0A0A6YYK1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV8-1A0A0A6YYK1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV8-1A0A0A6YYK1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV8-1A0A0A6YYK1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV8-1A0A0A6YYK1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV8-1A0A0A6YYK1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
TRAV8-1A0A0A6YYK1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.72■□□□□ 0.75
TRAV8-1A0A0A6YYK1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV8-1A0A0A6YYK1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV8-1A0A0A6YYK1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV8-1A0A0A6YYK1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV8-1A0A0A6YYK1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV8-1A0A0A6YYK1 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAV8-1A0A0A6YYK1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV8-1A0A0A6YYK1 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV8-1A0A0A6YYK1 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV8-1A0A0A6YYK1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.69■□□□□ 0.74
TRAV8-1A0A0A6YYK1 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TRAV8-1A0A0A6YYK1 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV8-1A0A0A6YYK1 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV8-1A0A0A6YYK1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TRAV8-1A0A0A6YYK1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV8-1A0A0A6YYK1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TRAV8-1A0A0A6YYK1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV8-1A0A0A6YYK1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.68■□□□□ 0.74
TRAV8-1A0A0A6YYK1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV8-1A0A0A6YYK1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV8-1A0A0A6YYK1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV8-1A0A0A6YYK1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV8-1A0A0A6YYK1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV8-1A0A0A6YYK1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.68■□□□□ 0.74
TRAV8-1A0A0A6YYK1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV8-1A0A0A6YYK1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TRAV8-1A0A0A6YYK1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV8-1A0A0A6YYK1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV8-1A0A0A6YYK1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV8-1A0A0A6YYK1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRAV8-1A0A0A6YYK1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.65■□□□□ 0.74
TRAV8-1A0A0A6YYK1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV8-1A0A0A6YYK1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.65■□□□□ 0.74
TRAV8-1A0A0A6YYK1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAV8-1A0A0A6YYK1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV8-1A0A0A6YYK1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV8-1A0A0A6YYK1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRAV8-1A0A0A6YYK1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRAV8-1A0A0A6YYK1 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TRAV8-1A0A0A6YYK1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV8-1A0A0A6YYK1 AC010864.1-201ENST00000609407 1511 ntBASIC19.64■□□□□ 0.73
TRAV8-1A0A0A6YYK1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV8-1A0A0A6YYK1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV8-1A0A0A6YYK1 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TRAV8-1A0A0A6YYK1 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV8-1A0A0A6YYK1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms