Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RPL10AP3-201ENST00000462503 651 ntBASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 RN7SL554P-201ENST00000468197 292 ntBASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 AC110994.1-201ENST00000468519 406 ntBASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 AC016546.1-201ENST00000473590 463 ntBASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 AC103409.1-202ENST00000518416 577 ntTSL 4 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 AC123767.1-204ENST00000523523 273 ntTSL 3 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 AC100818.1-202ENST00000523748 578 ntTSL 4 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 ANKRD42-206ENST00000528722 954 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 AC117503.2-201ENST00000538837 321 ntTSL 3 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 MYL6-207ENST00000547649 655 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 AL133371.3-201ENST00000556197 549 ntTSL 4 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 AC018618.1-202ENST00000559590 395 ntTSL 3 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 AC009120.2-202ENST00000566411 679 ntTSL 3 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 ZEB2P1-202ENST00000572816 902 ntTSL 5 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 RN7SL670P-201ENST00000577235 294 ntBASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 AC090774.3-201ENST00000578666 742 ntBASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 PCBP1-AS1-244ENST00000594376 1197 ntTSL 5 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 AC123912.1-201ENST00000594564 447 ntTSL 3 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 AC244255.1-201ENST00000613463 398 ntBASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 AC009120.2-201ENST00000620711 522 ntTSL 3 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 AC141557.2-201ENST00000621330 482 ntBASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 AQP4-AS1-206ENST00000628174 919 ntTSL 5 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 PCAT14-203ENST00000629869 976 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 FRMD7-201ENST00000298542 3198 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 AL390728.4-201ENST00000421406 1465 ntBASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 SUN1-203ENST00000401592 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 WDR93-205ENST00000560294 2293 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 TKTL2-201ENST00000280605 2654 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 OPTN-204ENST00000378752 3488 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 ARID1A-209ENST00000615191 3804 ntTSL 5 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 GTF2IP1-205ENST00000618412 2990 ntTSL 2 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 TCF4-205ENST00000537578 2767 ntTSL 2 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 CLIP1-214ENST00000540539 2592 ntTSL 2 BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NPIPA3F8WFD2 PMS2CL-204ENST00000486256 3327 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 FAM196A-202ENST00000522781 4403 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 LINC02525-202ENST00000435043 1505 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 GOSR2-234ENST00000640138 3408 ntTSL 5 BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 CNGA2-201ENST00000329903 2834 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 SLC5A1-201ENST00000266088 5061 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 TMEM136-204ENST00000529187 3930 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 RNF185-202ENST00000326132 3171 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 GRIA1-202ENST00000340592 3170 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 USP15-202ENST00000312635 2226 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 R3HDM2-207ENST00000441731 4076 ntTSL 5 BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 AGBL4-204ENST00000371839 2947 ntAPPRIS P2 TSL 2 BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 TCF4-226ENST00000565018 2357 ntTSL 5 BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 LINC01858-201ENST00000564534 1838 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 GPR15-201ENST00000284311 1252 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 SSX2-202ENST00000337502 1292 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 RNA5SP78-201ENST00000364622 118 ntBASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 HPN-AS1-201ENST00000392227 1124 ntTSL 2 BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 MAGEC3-202ENST00000409007 1290 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 TPM3P4-201ENST00000425942 755 ntBASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 BLNK-204ENST00000427367 1284 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 AC152007.1-201ENST00000428521 224 ntBASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 NR1I3-209ENST00000428574 1117 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 NR1I3-211ENST00000442691 1114 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 MT1G-202ENST00000444837 406 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 RBMY2OP-201ENST00000447105 810 ntBASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 NR1I3-228ENST00000511676 1061 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 NR1I3-230ENST00000511944 620 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 NR1I3-232ENST00000512372 861 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 AC091951.4-201ENST00000512746 332 ntTSL 5 BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 NR1I3-234ENST00000515621 1130 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 AC100860.1-201ENST00000517606 1064 ntTSL 4 BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 IGLV3-7-201ENST00000522952 271 ntBASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 AP002360.1-204ENST00000529331 700 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 AC020612.1-201ENST00000547655 541 ntBASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 AC003098.1-201ENST00000591540 494 ntTSL 3 BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 AC104984.6-201ENST00000591928 360 ntTSL 3 BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 AC008622.1-201ENST00000597106 284 ntBASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 AC083964.1-201ENST00000607549 630 ntBASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 AL022324.3-201ENST00000609330 747 ntBASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 AC110741.3-201ENST00000611983 659 ntBASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 AL109614.1-201ENST00000620327 419 ntBASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 CPSF7-226ENST00000626926 306 ntTSL 5 BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 ABBA01040607.1-201ENST00000640749 321 ntBASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 TNPO3-203ENST00000471234 3283 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 RAB3IP-218ENST00000553099 2674 ntTSL 2 BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 TRHR-201ENST00000311762 1415 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 ZNF610-209ENST00000616431 1772 ntAPPRIS P3 TSL 2 BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 ZNF252P-208ENST00000592792 2485 ntBASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 AC096720.2-201ENST00000623308 2458 ntBASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 RBFOX1-203ENST00000355637 3321 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 MAPT-AS1-204ENST00000634876 3602 ntTSL 5 BASIC8.09□□□□□ -1.11
NPIPA3F8WFD2 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.12
NPIPA3F8WFD2 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms