RNA–Protein interactions for RNA: ENST00000537578.5

TCF4-205, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-205ENST00000537578 NISCHQ9Y2I1 1504 aa19.59■□□□□ 0.73
TCF4-205ENST00000537578 SHROOM4Q9ULL8 1493 aa16.78■□□□□ 0.28
TCF4-205ENST00000537578 DCAF8L2P0C7V8 631 aa16.69■□□□□ 0.26
TCF4-205ENST00000537578 CCDC180Q9P1Z9 1646 aa16.61■□□□□ 0.25
TCF4-205ENST00000537578 ZCCHC6Q5VYS8 1495 aaKnown RBP16.47■□□□□ 0.23
TCF4-205ENST00000537578 SLC24A1O60721 1099 aa16.43■□□□□ 0.22
TCF4-205ENST00000537578 SUPT5HO00267 1087 aaKnown RBP16.34■□□□□ 0.21
TCF4-205ENST00000537578 CHIC1Q5VXU3 224 aa16■□□□□ 0.15
TCF4-205ENST00000537578 ABCC9O60706 1549 aa15.94■□□□□ 0.14
TCF4-205ENST00000537578 DCAF1Q9Y4B6 1507 aa15.93■□□□□ 0.14
TCF4-205ENST00000537578 SCRIBQ14160 1630 aa15.74■□□□□ 0.11
TCF4-205ENST00000537578 EHMT2Q96KQ7 1210 aa15.69■□□□□ 0.1
TCF4-205ENST00000537578 MYO15BQ96JP2 1530 aa15.55■□□□□ 0.08
TCF4-205ENST00000537578 NACADO15069 1562 aa15.5■□□□□ 0.07
TCF4-205ENST00000537578 RSF1Q96T23 1441 aaPredicted RBP15.47■□□□□ 0.07
TCF4-205ENST00000537578 CECR2Q9BXF3 1484 aa15.43■□□□□ 0.06
TCF4-205ENST00000537578 RB1CC1Q8TDY2 1594 aa15.33■□□□□ 0.04
TCF4-205ENST00000537578 PABPN1Q86U42 306 aaKnown RBP eCLIP15.32■□□□□ 0.04
TCF4-205ENST00000537578 LOC105371045A0A1W2PR82 267 aa15.31■□□□□ 0.04
TCF4-205ENST00000537578 MROH2BQ7Z745 1585 aa15.29■□□□□ 0.04
TCF4-205ENST00000537578 PLPPR3Q6T4P5 718 aa15.21■□□□□ 0.03
TCF4-205ENST00000537578 WIZO95785 1651 aa15.17■□□□□ 0.02
TCF4-205ENST00000537578 FAM9AQ8IZU1 332 aaPredicted RBP15.16■□□□□ 0.02
TCF4-205ENST00000537578 TRIM41Q8WV44 630 aa15.15■□□□□ 0.02
TCF4-205ENST00000537578 AEBP2Q6ZN18 517 aaPredicted RBP15.11■□□□□ 0.01
TCF4-205ENST00000537578 UNC13AQ9UPW8 1703 aa15.11■□□□□ 0.01
TCF4-205ENST00000537578 BAZ1AQ9NRL2 1556 aaPredicted RBP15.02□□□□□ -0.01
TCF4-205ENST00000537578 RTN4Q9NQC3 1192 aaKnown RBP15□□□□□ -0.01
TCF4-205ENST00000537578 BICRAQ9NZM4 1560 aa14.99□□□□□ -0.01
TCF4-205ENST00000537578 PCGF6Q9BYE7 350 aa14.96□□□□□ -0.02
TCF4-205ENST00000537578 SMARCA4P51532 1647 aa14.94□□□□□ -0.02
TCF4-205ENST00000537578 CCDC88BA6NC98 1476 aa14.89□□□□□ -0.03
TCF4-205ENST00000537578 TOP2AP11388 1531 aaKnown RBP14.83□□□□□ -0.04
TCF4-205ENST00000537578 ABCC8Q09428 1581 aa14.78□□□□□ -0.04
TCF4-205ENST00000537578 SMARCA2P51531 1590 aa14.78□□□□□ -0.04
TCF4-205ENST00000537578 PPARGC1BQ86YN6 1023 aaKnown RBP14.71□□□□□ -0.06
TCF4-205ENST00000537578 EIF4G1Q04637 1599 aaKnown RBP14.7□□□□□ -0.06
TCF4-205ENST00000537578 ATAD2BQ9ULI0 1458 aa14.69□□□□□ -0.06
TCF4-205ENST00000537578 DAXXQ9UER7 740 aaPredicted RBP14.67□□□□□ -0.06
TCF4-205ENST00000537578 BAZ1BQ9UIG0 1483 aaKnown RBP14.63□□□□□ -0.07
TCF4-205ENST00000537578 SOGA1O94964 1423 aa14.63□□□□□ -0.07
TCF4-205ENST00000537578 HRCP23327 699 aa14.63□□□□□ -0.07
TCF4-205ENST00000537578 TRIM26Q12899 539 aaPredicted RBP14.61□□□□□ -0.07
TCF4-205ENST00000537578 RUSC2Q8N2Y8 1516 aa14.6□□□□□ -0.07
TCF4-205ENST00000537578 PEG3Q9GZU2 1588 aa14.59□□□□□ -0.07
TCF4-205ENST00000537578 PHF23Q9BUL5 403 aaPredicted RBP14.57□□□□□ -0.08
TCF4-205ENST00000537578 NCBP3Q53F19 620 aaKnown RBP14.53□□□□□ -0.08
TCF4-205ENST00000537578 TTBK1Q5TCY1 1321 aaPredicted RBP14.53□□□□□ -0.08
TCF4-205ENST00000537578 CSRNP3Q8WYN3 585 aa14.52□□□□□ -0.08
TCF4-205ENST00000537578 WRNQ14191 1432 aaPredicted RBP eCLIP14.52□□□□□ -0.09
TCF4-205ENST00000537578 UBTFP17480 764 aaKnown RBP14.51□□□□□ -0.09
TCF4-205ENST00000537578 KCNA4P22459 653 aa14.51□□□□□ -0.09
TCF4-205ENST00000537578 RANGAP1P46060 587 aaPredicted RBP14.45□□□□□ -0.1
TCF4-205ENST00000537578 SYNJ1O43426 1573 aa14.44□□□□□ -0.1
TCF4-205ENST00000537578 AMER1Q5JTC6 1135 aaPredicted RBP14.43□□□□□ -0.1
TCF4-205ENST00000537578 NCAPD3P42695 1498 aa14.42□□□□□ -0.1
TCF4-205ENST00000537578 PRKCSHP14314 528 aaPredicted RBP14.42□□□□□ -0.1
TCF4-205ENST00000537578 CEP162Q5TB80 1403 aa14.35□□□□□ -0.11
TCF4-205ENST00000537578 TNIKQ9UKE5 1360 aa14.32□□□□□ -0.12
TCF4-205ENST00000537578 HMGXB3Q12766 1538 aa14.31□□□□□ -0.12
TCF4-205ENST00000537578 EEA1Q15075 1411 aa14.29□□□□□ -0.12
TCF4-205ENST00000537578 DNAJC5BQ9UF47 199 aa14.28□□□□□ -0.12
TCF4-205ENST00000537578 GOLGA3Q08378 1498 aa14.25□□□□□ -0.13
TCF4-205ENST00000537578 RAPGEF2Q9Y4G8 1499 aa14.24□□□□□ -0.13
TCF4-205ENST00000537578 CC2D2AQ9P2K1 1620 aa14.24□□□□□ -0.13
TCF4-205ENST00000537578 CFTRP13569 1480 aa14.24□□□□□ -0.13
TCF4-205ENST00000537578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.23□□□□□ -0.13
TCF4-205ENST00000537578 CUX1P39880 1505 aa14.22□□□□□ -0.13
TCF4-205ENST00000537578 TOP2BQ02880 1626 aa14.21□□□□□ -0.13
TCF4-205ENST00000537578 CEP164Q9UPV0 1460 aa14.2□□□□□ -0.14
TCF4-205ENST00000537578 CADPSQ9ULU8 1353 aa14.19□□□□□ -0.14
TCF4-205ENST00000537578 CLIP1P30622 1438 aa14.16□□□□□ -0.14
TCF4-205ENST00000537578 NESP48681 1621 aa14.12□□□□□ -0.15
TCF4-205ENST00000537578 BIVM-ERCC5R4GMW8 1640 aa14.12□□□□□ -0.15
TCF4-205ENST00000537578 KIF21BO75037 1637 aa14.1□□□□□ -0.15
TCF4-205ENST00000537578 CCER1Q8TC90 406 aaPredicted RBP14.1□□□□□ -0.15
TCF4-205ENST00000537578 KIF27Q86VH2 1401 aa14.08□□□□□ -0.16
TCF4-205ENST00000537578 HNRNPUL2Q1KMD3 747 aaKnown RBP14.06□□□□□ -0.16
TCF4-205ENST00000537578 PRXQ9BXM0 1461 aa14.06□□□□□ -0.16
TCF4-205ENST00000537578 CUX2O14529 1486 aa14.05□□□□□ -0.16
TCF4-205ENST00000537578 ZEB1P37275 1124 aaPredicted RBP14.05□□□□□ -0.16
TCF4-205ENST00000537578 APLP2Q06481 763 aa14.05□□□□□ -0.16
TCF4-205ENST00000537578 FANCD2Q9BXW9 1451 aa14.04□□□□□ -0.16
TCF4-205ENST00000537578 IGF1RP08069 1367 aa14.03□□□□□ -0.16
TCF4-205ENST00000537578 FGD5Q6ZNL6 1462 aa14.02□□□□□ -0.17
TCF4-205ENST00000537578 TIMELESSQ9UNS1 1208 aa14.02□□□□□ -0.17
TCF4-205ENST00000537578 VPS8Q8N3P4 1428 aa14.01□□□□□ -0.17
TCF4-205ENST00000537578 RAD54L2Q9Y4B4 1467 aa14□□□□□ -0.17
TCF4-205ENST00000537578 KANK4Q5T7N3 995 aaPredicted RBP13.99□□□□□ -0.17
TCF4-205ENST00000537578 P3H3Q8IVL6 736 aa13.99□□□□□ -0.17
TCF4-205ENST00000537578 CARMIL1Q5VZK9 1371 aa13.96□□□□□ -0.18
TCF4-205ENST00000537578 ARAP1Q96P48 1450 aa13.94□□□□□ -0.18
TCF4-205ENST00000537578 ERICH3Q5RHP9 1530 aa13.93□□□□□ -0.18
TCF4-205ENST00000537578 PRDM2Q13029 1718 aa13.92□□□□□ -0.18
TCF4-205ENST00000537578 ATP1B4Q9UN42 357 aaPredicted RBP13.9□□□□□ -0.18
TCF4-205ENST00000537578 TOPBP1Q92547 1522 aa13.89□□□□□ -0.19
TCF4-205ENST00000537578 TDRD9Q8NDG6 1382 aaKnown RBP13.89□□□□□ -0.19
TCF4-205ENST00000537578 POLA1P09884 1462 aaPredicted RBP13.89□□□□□ -0.19
TCF4-205ENST00000537578 ARHGAP35Q9NRY4 1499 aa13.87□□□□□ -0.19
TCF4-205ENST00000537578 URB2Q14146 1524 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms