RNA–Protein interactions for RNA: ENST00000486256.5

PMS2CL-204, Transcript of PMS2 C-terminal like pseudogene, humanhuman

TSL 1 (best) BASIC

Gene PMS2CL, Length 3,327 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2CL-204ENST00000486256 NISCHQ9Y2I1 1504 aa17.7■□□□□ 0.42
PMS2CL-204ENST00000486256 SHROOM4Q9ULL8 1493 aa16.2■□□□□ 0.18
PMS2CL-204ENST00000486256 PPARGC1BQ86YN6 1023 aaKnown RBP16.12■□□□□ 0.17
PMS2CL-204ENST00000486256 SUPT5HO00267 1087 aaKnown RBP16.1■□□□□ 0.17
PMS2CL-204ENST00000486256 HRCP23327 699 aa16.1■□□□□ 0.17
PMS2CL-204ENST00000486256 PCGF6Q9BYE7 350 aa16.01■□□□□ 0.15
PMS2CL-204ENST00000486256 DCAF8L2P0C7V8 631 aa15.7■□□□□ 0.1
PMS2CL-204ENST00000486256 MYO15BQ96JP2 1530 aa15.65■□□□□ 0.1
PMS2CL-204ENST00000486256 CHIC1Q5VXU3 224 aa15.5■□□□□ 0.07
PMS2CL-204ENST00000486256 PELP1Q8IZL8 1130 aaKnown RBP15.45■□□□□ 0.06
PMS2CL-204ENST00000486256 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
PMS2CL-204ENST00000486256 LOC105371045A0A1W2PR82 267 aa15.42■□□□□ 0.06
PMS2CL-204ENST00000486256 EHMT2Q96KQ7 1210 aa15.35■□□□□ 0.05
PMS2CL-204ENST00000486256 TRIM26Q12899 539 aaPredicted RBP15.17■□□□□ 0.02
PMS2CL-204ENST00000486256 DCAF1Q9Y4B6 1507 aa15.02□□□□□ -0.01
PMS2CL-204ENST00000486256 FAM9AQ8IZU1 332 aaPredicted RBP15□□□□□ -0.01
PMS2CL-204ENST00000486256 NEUROD1Q13562 356 aa15□□□□□ -0.01
PMS2CL-204ENST00000486256 GTF3C3Q9Y5Q9 886 aa14.95□□□□□ -0.02
PMS2CL-204ENST00000486256 ZCCHC6Q5VYS8 1495 aaKnown RBP14.94□□□□□ -0.02
PMS2CL-204ENST00000486256 ZEB1P37275 1124 aaPredicted RBP14.92□□□□□ -0.02
PMS2CL-204ENST00000486256 ACIN1Q9UKV3 1341 aaKnown RBP14.91□□□□□ -0.02
PMS2CL-204ENST00000486256 TTBK1Q5TCY1 1321 aaPredicted RBP14.85□□□□□ -0.03
PMS2CL-204ENST00000486256 CCDC180Q9P1Z9 1646 aa14.85□□□□□ -0.03
PMS2CL-204ENST00000486256 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.81□□□□□ -0.04
PMS2CL-204ENST00000486256 YTHDC1Q96MU7 727 aaKnown RBP14.77□□□□□ -0.05
PMS2CL-204ENST00000486256 MYT1Q01538 1121 aa14.76□□□□□ -0.05
PMS2CL-204ENST00000486256 TRIM41Q8WV44 630 aa14.73□□□□□ -0.05
PMS2CL-204ENST00000486256 CCER1Q8TC90 406 aaPredicted RBP14.71□□□□□ -0.06
PMS2CL-204ENST00000486256 CENPBP07199 599 aaPredicted RBP14.69□□□□□ -0.06
PMS2CL-204ENST00000486256 DIEXFQ68CQ4 756 aaKnown RBP14.69□□□□□ -0.06
PMS2CL-204ENST00000486256 MIER1Q8N108 512 aa14.35□□□□□ -0.11
PMS2CL-204ENST00000486256 RSF1Q96T23 1441 aaPredicted RBP14.31□□□□□ -0.12
PMS2CL-204ENST00000486256 ZNF316A6NFI3 1004 aaPredicted RBP14.28□□□□□ -0.12
PMS2CL-204ENST00000486256 SCRIBQ14160 1630 aa14.25□□□□□ -0.13
PMS2CL-204ENST00000486256 BCL11AQ9H165 835 aa14.23□□□□□ -0.13
PMS2CL-204ENST00000486256 RB1CC1Q8TDY2 1594 aa14.19□□□□□ -0.14
PMS2CL-204ENST00000486256 RANGAP1P46060 587 aaPredicted RBP14.16□□□□□ -0.14
PMS2CL-204ENST00000486256 HNRNPUL2Q1KMD3 747 aaKnown RBP14.14□□□□□ -0.15
PMS2CL-204ENST00000486256 UBTFP17480 764 aaKnown RBP14.12□□□□□ -0.15
PMS2CL-204ENST00000486256 BCANQ96GW7 911 aa14.11□□□□□ -0.15
PMS2CL-204ENST00000486256 ABCC9O60706 1549 aa14.11□□□□□ -0.15
PMS2CL-204ENST00000486256 SUPT16HQ9Y5B9 1047 aaKnown RBP14.1□□□□□ -0.15
PMS2CL-204ENST00000486256 AEBP2Q6ZN18 517 aaPredicted RBP14.09□□□□□ -0.15
PMS2CL-204ENST00000486256 CSRNP3Q8WYN3 585 aa14.09□□□□□ -0.15
PMS2CL-204ENST00000486256 CECR2Q9BXF3 1484 aa14.09□□□□□ -0.15
PMS2CL-204ENST00000486256 ANP32EQ9BTT0 268 aa14.08□□□□□ -0.15
PMS2CL-204ENST00000486256 TSHZ2Q9NRE2 1034 aa14.06□□□□□ -0.16
PMS2CL-204ENST00000486256 MROH2BQ7Z745 1585 aa13.94□□□□□ -0.18
PMS2CL-204ENST00000486256 KCNH8Q96L42 1107 aa13.9□□□□□ -0.18
PMS2CL-204ENST00000486256 SOGA1O94964 1423 aa13.85□□□□□ -0.19
PMS2CL-204ENST00000486256 CEP162Q5TB80 1403 aa13.85□□□□□ -0.19
PMS2CL-204ENST00000486256 WIZO95785 1651 aa13.85□□□□□ -0.19
PMS2CL-204ENST00000486256 ITGAEP38570 1179 aa13.85□□□□□ -0.19
PMS2CL-204ENST00000486256 CCDC88BA6NC98 1476 aa13.85□□□□□ -0.19
PMS2CL-204ENST00000486256 ABCC8Q09428 1581 aa13.84□□□□□ -0.19
PMS2CL-204ENST00000486256 FKBP8Q14318 412 aa13.82□□□□□ -0.2
PMS2CL-204ENST00000486256 APLP2Q06481 763 aa13.81□□□□□ -0.2
PMS2CL-204ENST00000486256 RUSC2Q8N2Y8 1516 aa13.78□□□□□ -0.2
PMS2CL-204ENST00000486256 PABPN1Q86U42 306 aaKnown RBP eCLIP13.75□□□□□ -0.21
PMS2CL-204ENST00000486256 RBM19Q9Y4C8 960 aaKnown RBP13.74□□□□□ -0.21
PMS2CL-204ENST00000486256 WRNQ14191 1432 aaPredicted RBP eCLIP13.7□□□□□ -0.22
PMS2CL-204ENST00000486256 TRIM52Q96A61 297 aa13.67□□□□□ -0.22
PMS2CL-204ENST00000486256 TNIKQ9UKE5 1360 aa13.67□□□□□ -0.22
PMS2CL-204ENST00000486256 PRKCSHP14314 528 aaPredicted RBP13.67□□□□□ -0.22
PMS2CL-204ENST00000486256 CLSPNQ9HAW4 1339 aa13.66□□□□□ -0.22
PMS2CL-204ENST00000486256 MSH5O43196 834 aa13.65□□□□□ -0.22
PMS2CL-204ENST00000486256 HIRIP3Q9BW71 556 aaPredicted RBP13.62□□□□□ -0.23
PMS2CL-204ENST00000486256 NEFLP07196 543 aa13.62□□□□□ -0.23
PMS2CL-204ENST00000486256 IRX6P78412 446 aaPredicted RBP13.62□□□□□ -0.23
PMS2CL-204ENST00000486256 ERICH6Q7L0X2 663 aa13.62□□□□□ -0.23
PMS2CL-204ENST00000486256 DDX10Q13206 875 aaKnown RBP13.6□□□□□ -0.23
PMS2CL-204ENST00000486256 CLIP1P30622 1438 aa13.55□□□□□ -0.24
PMS2CL-204ENST00000486256 GOLGA3Q08378 1498 aa13.53□□□□□ -0.24
PMS2CL-204ENST00000486256 BAZ1AQ9NRL2 1556 aaPredicted RBP13.53□□□□□ -0.24
PMS2CL-204ENST00000486256 DHX57Q6P158 1386 aaKnown RBP13.52□□□□□ -0.25
PMS2CL-204ENST00000486256 NACADO15069 1562 aa13.51□□□□□ -0.25
PMS2CL-204ENST00000486256 KANK4Q5T7N3 995 aaPredicted RBP13.5□□□□□ -0.25
PMS2CL-204ENST00000486256 NBR1Q14596 966 aa13.48□□□□□ -0.25
PMS2CL-204ENST00000486256 ANO8Q9HCE9 1232 aaPredicted RBP13.46□□□□□ -0.25
PMS2CL-204ENST00000486256 ATP1B4Q9UN42 357 aaPredicted RBP13.46□□□□□ -0.25
PMS2CL-204ENST00000486256 CNGB1Q14028 1251 aaPredicted RBP13.45□□□□□ -0.26
PMS2CL-204ENST00000486256 DEKP35659 375 aaKnown RBP13.45□□□□□ -0.26
PMS2CL-204ENST00000486256 SMARCA2P51531 1590 aa13.44□□□□□ -0.26
PMS2CL-204ENST00000486256 TOP2AP11388 1531 aaKnown RBP13.43□□□□□ -0.26
PMS2CL-204ENST00000486256 EIF4G1Q04637 1599 aaKnown RBP13.42□□□□□ -0.26
PMS2CL-204ENST00000486256 RAPGEF2Q9Y4G8 1499 aa13.41□□□□□ -0.26
PMS2CL-204ENST00000486256 EEA1Q15075 1411 aa13.41□□□□□ -0.26
PMS2CL-204ENST00000486256 VPS8Q8N3P4 1428 aa13.39□□□□□ -0.27
PMS2CL-204ENST00000486256 SIN3AQ96ST3 1273 aa13.39□□□□□ -0.27
PMS2CL-204ENST00000486256 CCDC136Q96JN2 1154 aa13.39□□□□□ -0.27
PMS2CL-204ENST00000486256 CDK11AQ9UQ88 783 aaPredicted RBP13.39□□□□□ -0.27
PMS2CL-204ENST00000486256 CEP164Q9UPV0 1460 aa13.38□□□□□ -0.27
PMS2CL-204ENST00000486256 RTN4Q9NQC3 1192 aaKnown RBP13.38□□□□□ -0.27
PMS2CL-204ENST00000486256 SMARCA4P51532 1647 aa13.35□□□□□ -0.27
PMS2CL-204ENST00000486256 SENP3-EIF4A1A0A087X0R7 540 aa13.34□□□□□ -0.27
PMS2CL-204ENST00000486256 FAM50AQ14320 339 aaKnown RBP13.34□□□□□ -0.27
PMS2CL-204ENST00000486256 HNRNPUQ00839 825 aaKnown RBP eCLIP13.34□□□□□ -0.27
PMS2CL-204ENST00000486256 P3H3Q8IVL6 736 aa13.33□□□□□ -0.28
PMS2CL-204ENST00000486256 ANP32CO43423 234 aa13.33□□□□□ -0.28
PMS2CL-204ENST00000486256 SALL2Q9Y467 1007 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms