RNA–Protein interactions for RNA: ENST00000486256.5

PMS2CL-204, Transcript of PMS2 C-terminal like pseudogene, humanhuman

TSL 1 (best) BASIC

Gene PMS2CL, Length 3,327 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2CL-204ENST00000486256 NISCHQ9Y2I1 1504 aa17.7■□□□□ 0.42
PMS2CL-204ENST00000486256 SHROOM4Q9ULL8 1493 aa16.2■□□□□ 0.18
PMS2CL-204ENST00000486256 PPARGC1BQ86YN6 1023 aaKnown RBP16.12■□□□□ 0.17
PMS2CL-204ENST00000486256 SUPT5HO00267 1087 aaKnown RBP16.1■□□□□ 0.17
PMS2CL-204ENST00000486256 HRCP23327 699 aa16.1■□□□□ 0.17
PMS2CL-204ENST00000486256 PCGF6Q9BYE7 350 aa16.01■□□□□ 0.15
PMS2CL-204ENST00000486256 DCAF8L2P0C7V8 631 aa15.7■□□□□ 0.1
PMS2CL-204ENST00000486256 MYO15BQ96JP2 1530 aa15.65■□□□□ 0.1
PMS2CL-204ENST00000486256 CHIC1Q5VXU3 224 aa15.5■□□□□ 0.07
PMS2CL-204ENST00000486256 PELP1Q8IZL8 1130 aaKnown RBP15.45■□□□□ 0.06
PMS2CL-204ENST00000486256 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
PMS2CL-204ENST00000486256 LOC105371045A0A1W2PR82 267 aa15.42■□□□□ 0.06
PMS2CL-204ENST00000486256 EHMT2Q96KQ7 1210 aa15.35■□□□□ 0.05
PMS2CL-204ENST00000486256 TRIM26Q12899 539 aaPredicted RBP15.17■□□□□ 0.02
PMS2CL-204ENST00000486256 DCAF1Q9Y4B6 1507 aa15.02□□□□□ -0.01
PMS2CL-204ENST00000486256 FAM9AQ8IZU1 332 aaPredicted RBP15□□□□□ -0.01
PMS2CL-204ENST00000486256 NEUROD1Q13562 356 aa15□□□□□ -0.01
PMS2CL-204ENST00000486256 GTF3C3Q9Y5Q9 886 aa14.95□□□□□ -0.02
PMS2CL-204ENST00000486256 ZCCHC6Q5VYS8 1495 aaKnown RBP14.94□□□□□ -0.02
PMS2CL-204ENST00000486256 ZEB1P37275 1124 aaPredicted RBP14.92□□□□□ -0.02
PMS2CL-204ENST00000486256 ACIN1Q9UKV3 1341 aaKnown RBP14.91□□□□□ -0.02
PMS2CL-204ENST00000486256 TTBK1Q5TCY1 1321 aaPredicted RBP14.85□□□□□ -0.03
PMS2CL-204ENST00000486256 CCDC180Q9P1Z9 1646 aa14.85□□□□□ -0.03
PMS2CL-204ENST00000486256 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.81□□□□□ -0.04
PMS2CL-204ENST00000486256 YTHDC1Q96MU7 727 aaKnown RBP14.77□□□□□ -0.05
PMS2CL-204ENST00000486256 MYT1Q01538 1121 aa14.76□□□□□ -0.05
PMS2CL-204ENST00000486256 TRIM41Q8WV44 630 aa14.73□□□□□ -0.05
PMS2CL-204ENST00000486256 CCER1Q8TC90 406 aaPredicted RBP14.71□□□□□ -0.06
PMS2CL-204ENST00000486256 CENPBP07199 599 aaPredicted RBP14.69□□□□□ -0.06
PMS2CL-204ENST00000486256 DIEXFQ68CQ4 756 aaKnown RBP14.69□□□□□ -0.06
PMS2CL-204ENST00000486256 MIER1Q8N108 512 aa14.35□□□□□ -0.11
PMS2CL-204ENST00000486256 RSF1Q96T23 1441 aaPredicted RBP14.31□□□□□ -0.12
PMS2CL-204ENST00000486256 ZNF316A6NFI3 1004 aaPredicted RBP14.28□□□□□ -0.12
PMS2CL-204ENST00000486256 SCRIBQ14160 1630 aa14.25□□□□□ -0.13
PMS2CL-204ENST00000486256 BCL11AQ9H165 835 aa14.23□□□□□ -0.13
PMS2CL-204ENST00000486256 RB1CC1Q8TDY2 1594 aa14.19□□□□□ -0.14
PMS2CL-204ENST00000486256 RANGAP1P46060 587 aaPredicted RBP14.16□□□□□ -0.14
PMS2CL-204ENST00000486256 HNRNPUL2Q1KMD3 747 aaKnown RBP14.14□□□□□ -0.15
PMS2CL-204ENST00000486256 UBTFP17480 764 aaKnown RBP14.12□□□□□ -0.15
PMS2CL-204ENST00000486256 BCANQ96GW7 911 aa14.11□□□□□ -0.15
PMS2CL-204ENST00000486256 ABCC9O60706 1549 aa14.11□□□□□ -0.15
PMS2CL-204ENST00000486256 SUPT16HQ9Y5B9 1047 aaKnown RBP14.1□□□□□ -0.15
PMS2CL-204ENST00000486256 AEBP2Q6ZN18 517 aaPredicted RBP14.09□□□□□ -0.15
PMS2CL-204ENST00000486256 CSRNP3Q8WYN3 585 aa14.09□□□□□ -0.15
PMS2CL-204ENST00000486256 CECR2Q9BXF3 1484 aa14.09□□□□□ -0.15
PMS2CL-204ENST00000486256 ANP32EQ9BTT0 268 aa14.08□□□□□ -0.15
PMS2CL-204ENST00000486256 TSHZ2Q9NRE2 1034 aa14.06□□□□□ -0.16
PMS2CL-204ENST00000486256 MROH2BQ7Z745 1585 aa13.94□□□□□ -0.18
PMS2CL-204ENST00000486256 KCNH8Q96L42 1107 aa13.9□□□□□ -0.18
PMS2CL-204ENST00000486256 SOGA1O94964 1423 aa13.85□□□□□ -0.19
PMS2CL-204ENST00000486256 CEP162Q5TB80 1403 aa13.85□□□□□ -0.19
PMS2CL-204ENST00000486256 WIZO95785 1651 aa13.85□□□□□ -0.19
PMS2CL-204ENST00000486256 ITGAEP38570 1179 aa13.85□□□□□ -0.19
PMS2CL-204ENST00000486256 CCDC88BA6NC98 1476 aa13.85□□□□□ -0.19
PMS2CL-204ENST00000486256 ABCC8Q09428 1581 aa13.84□□□□□ -0.19
PMS2CL-204ENST00000486256 FKBP8Q14318 412 aa13.82□□□□□ -0.2
PMS2CL-204ENST00000486256 APLP2Q06481 763 aa13.81□□□□□ -0.2
PMS2CL-204ENST00000486256 RUSC2Q8N2Y8 1516 aa13.78□□□□□ -0.2
PMS2CL-204ENST00000486256 PABPN1Q86U42 306 aaKnown RBP eCLIP13.75□□□□□ -0.21
PMS2CL-204ENST00000486256 RBM19Q9Y4C8 960 aaKnown RBP13.74□□□□□ -0.21
PMS2CL-204ENST00000486256 WRNQ14191 1432 aaPredicted RBP eCLIP13.7□□□□□ -0.22
PMS2CL-204ENST00000486256 TRIM52Q96A61 297 aa13.67□□□□□ -0.22
PMS2CL-204ENST00000486256 TNIKQ9UKE5 1360 aa13.67□□□□□ -0.22
PMS2CL-204ENST00000486256 PRKCSHP14314 528 aaPredicted RBP13.67□□□□□ -0.22
PMS2CL-204ENST00000486256 CLSPNQ9HAW4 1339 aa13.66□□□□□ -0.22
PMS2CL-204ENST00000486256 MSH5O43196 834 aa13.65□□□□□ -0.22
PMS2CL-204ENST00000486256 HIRIP3Q9BW71 556 aaPredicted RBP13.62□□□□□ -0.23
PMS2CL-204ENST00000486256 NEFLP07196 543 aa13.62□□□□□ -0.23
PMS2CL-204ENST00000486256 IRX6P78412 446 aaPredicted RBP13.62□□□□□ -0.23
PMS2CL-204ENST00000486256 ERICH6Q7L0X2 663 aa13.62□□□□□ -0.23
PMS2CL-204ENST00000486256 DDX10Q13206 875 aaKnown RBP13.6□□□□□ -0.23
PMS2CL-204ENST00000486256 CLIP1P30622 1438 aa13.55□□□□□ -0.24
PMS2CL-204ENST00000486256 GOLGA3Q08378 1498 aa13.53□□□□□ -0.24
PMS2CL-204ENST00000486256 BAZ1AQ9NRL2 1556 aaPredicted RBP13.53□□□□□ -0.24
PMS2CL-204ENST00000486256 DHX57Q6P158 1386 aaKnown RBP13.52□□□□□ -0.25
PMS2CL-204ENST00000486256 NACADO15069 1562 aa13.51□□□□□ -0.25
PMS2CL-204ENST00000486256 KANK4Q5T7N3 995 aaPredicted RBP13.5□□□□□ -0.25
PMS2CL-204ENST00000486256 NBR1Q14596 966 aa13.48□□□□□ -0.25
PMS2CL-204ENST00000486256 ANO8Q9HCE9 1232 aaPredicted RBP13.46□□□□□ -0.25
PMS2CL-204ENST00000486256 ATP1B4Q9UN42 357 aaPredicted RBP13.46□□□□□ -0.25
PMS2CL-204ENST00000486256 CNGB1Q14028 1251 aaPredicted RBP13.45□□□□□ -0.26
PMS2CL-204ENST00000486256 DEKP35659 375 aaKnown RBP13.45□□□□□ -0.26
PMS2CL-204ENST00000486256 SMARCA2P51531 1590 aa13.44□□□□□ -0.26
PMS2CL-204ENST00000486256 TOP2AP11388 1531 aaKnown RBP13.43□□□□□ -0.26
PMS2CL-204ENST00000486256 EIF4G1Q04637 1599 aaKnown RBP13.42□□□□□ -0.26
PMS2CL-204ENST00000486256 RAPGEF2Q9Y4G8 1499 aa13.41□□□□□ -0.26
PMS2CL-204ENST00000486256 EEA1Q15075 1411 aa13.41□□□□□ -0.26
PMS2CL-204ENST00000486256 VPS8Q8N3P4 1428 aa13.39□□□□□ -0.27
PMS2CL-204ENST00000486256 SIN3AQ96ST3 1273 aa13.39□□□□□ -0.27
PMS2CL-204ENST00000486256 CCDC136Q96JN2 1154 aa13.39□□□□□ -0.27
PMS2CL-204ENST00000486256 CDK11AQ9UQ88 783 aaPredicted RBP13.39□□□□□ -0.27
PMS2CL-204ENST00000486256 CEP164Q9UPV0 1460 aa13.38□□□□□ -0.27
PMS2CL-204ENST00000486256 RTN4Q9NQC3 1192 aaKnown RBP13.38□□□□□ -0.27
PMS2CL-204ENST00000486256 SMARCA4P51532 1647 aa13.35□□□□□ -0.27
PMS2CL-204ENST00000486256 SENP3-EIF4A1A0A087X0R7 540 aa13.34□□□□□ -0.27
PMS2CL-204ENST00000486256 FAM50AQ14320 339 aaKnown RBP13.34□□□□□ -0.27
PMS2CL-204ENST00000486256 HNRNPUQ00839 825 aaKnown RBP eCLIP13.34□□□□□ -0.27
PMS2CL-204ENST00000486256 P3H3Q8IVL6 736 aa13.33□□□□□ -0.28
PMS2CL-204ENST00000486256 ANP32CO43423 234 aa13.33□□□□□ -0.28
PMS2CL-204ENST00000486256 SALL2Q9Y467 1007 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms