RNA–Protein interactions for RNA: ENST00000380931.6

AP001043.1-202, humanhuman

TSL 2 BASIC

Gene AP001043.1, Length 5,027 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001043.1-202ENST00000380931 DCAF8L2P0C7V8 631 aa14.57□□□□□ -0.08
AP001043.1-202ENST00000380931 SUPT5HO00267 1087 aaKnown RBP13.69□□□□□ -0.22
AP001043.1-202ENST00000380931 NISCHQ9Y2I1 1504 aa13.44□□□□□ -0.26
AP001043.1-202ENST00000380931 SHROOM4Q9ULL8 1493 aa13.32□□□□□ -0.28
AP001043.1-202ENST00000380931 PELP1Q8IZL8 1130 aaKnown RBP13.28□□□□□ -0.28
AP001043.1-202ENST00000380931 EHMT2Q96KQ7 1210 aa13.28□□□□□ -0.28
AP001043.1-202ENST00000380931 APLP2Q06481 763 aa13.27□□□□□ -0.29
AP001043.1-202ENST00000380931 FAM9AQ8IZU1 332 aaPredicted RBP13.2□□□□□ -0.3
AP001043.1-202ENST00000380931 MYT1Q01538 1121 aa13.07□□□□□ -0.32
AP001043.1-202ENST00000380931 TTBK1Q5TCY1 1321 aaPredicted RBP12.84□□□□□ -0.35
AP001043.1-202ENST00000380931 RANGAP1P46060 587 aaPredicted RBP12.77□□□□□ -0.37
AP001043.1-202ENST00000380931 PCGF6Q9BYE7 350 aa12.76□□□□□ -0.37
AP001043.1-202ENST00000380931 ATP1B4Q9UN42 357 aaPredicted RBP12.75□□□□□ -0.37
AP001043.1-202ENST00000380931 TRIM41Q8WV44 630 aa12.7□□□□□ -0.38
AP001043.1-202ENST00000380931 CCER1Q8TC90 406 aaPredicted RBP12.7□□□□□ -0.38
AP001043.1-202ENST00000380931 CENPBP07199 599 aaPredicted RBP12.67□□□□□ -0.38
AP001043.1-202ENST00000380931 ERICH6Q7L0X2 663 aa12.67□□□□□ -0.38
AP001043.1-202ENST00000380931 ZEB1P37275 1124 aaPredicted RBP12.66□□□□□ -0.38
AP001043.1-202ENST00000380931 UBTFP17480 764 aaKnown RBP12.64□□□□□ -0.39
AP001043.1-202ENST00000380931 NEFLP07196 543 aa12.51□□□□□ -0.41
AP001043.1-202ENST00000380931 MYT1LQ9UL68 1186 aa12.38□□□□□ -0.43
AP001043.1-202ENST00000380931 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.34□□□□□ -0.43
AP001043.1-202ENST00000380931 HNRNPUL2Q1KMD3 747 aaKnown RBP12.34□□□□□ -0.43
AP001043.1-202ENST00000380931 HRCP23327 699 aa12.33□□□□□ -0.44
AP001043.1-202ENST00000380931 YTHDC1Q96MU7 727 aaKnown RBP12.31□□□□□ -0.44
AP001043.1-202ENST00000380931 PPARGC1BQ86YN6 1023 aaKnown RBP12.25□□□□□ -0.45
AP001043.1-202ENST00000380931 ITGAEP38570 1179 aa12.22□□□□□ -0.45
AP001043.1-202ENST00000380931 POLR3GLQ9BT43 218 aa12.22□□□□□ -0.45
AP001043.1-202ENST00000380931 DAXXQ9UER7 740 aaPredicted RBP12.21□□□□□ -0.45
AP001043.1-202ENST00000380931 TRIM26Q12899 539 aaPredicted RBP12.18□□□□□ -0.46
AP001043.1-202ENST00000380931 CHIC1Q5VXU3 224 aa12.07□□□□□ -0.48
AP001043.1-202ENST00000380931 SLC4A1APQ9BWU0 796 aaKnown RBP12.07□□□□□ -0.48
AP001043.1-202ENST00000380931 CNGB1Q14028 1251 aaPredicted RBP12.04□□□□□ -0.48
AP001043.1-202ENST00000380931 SCAF1Q9H7N4 1312 aaKnown RBP12□□□□□ -0.49
AP001043.1-202ENST00000380931 LOC105371045A0A1W2PR82 267 aa11.96□□□□□ -0.49
AP001043.1-202ENST00000380931 CLSPNQ9HAW4 1339 aa11.94□□□□□ -0.5
AP001043.1-202ENST00000380931 FAM50AQ14320 339 aaKnown RBP11.91□□□□□ -0.5
AP001043.1-202ENST00000380931 BCL11AQ9H165 835 aa11.91□□□□□ -0.5
AP001043.1-202ENST00000380931 TRIM52Q96A61 297 aa11.9□□□□□ -0.5
AP001043.1-202ENST00000380931 ZNF316A6NFI3 1004 aaPredicted RBP11.88□□□□□ -0.51
AP001043.1-202ENST00000380931 RTL5Q5HYW3 569 aaPredicted RBP11.83□□□□□ -0.52
AP001043.1-202ENST00000380931 PRKCSHP14314 528 aaPredicted RBP11.82□□□□□ -0.52
AP001043.1-202ENST00000380931 GTF3C3Q9Y5Q9 886 aa11.81□□□□□ -0.52
AP001043.1-202ENST00000380931 PABPN1Q86U42 306 aaKnown RBP eCLIP11.81□□□□□ -0.52
AP001043.1-202ENST00000380931 ZBTB47Q9UFB7 747 aaPredicted RBP11.79□□□□□ -0.52
AP001043.1-202ENST00000380931 FBLN2P98095 1184 aa11.78□□□□□ -0.52
AP001043.1-202ENST00000380931 DIEXFQ68CQ4 756 aaKnown RBP11.78□□□□□ -0.52
AP001043.1-202ENST00000380931 NEUROD1Q13562 356 aa11.77□□□□□ -0.52
AP001043.1-202ENST00000380931 ZNF326Q5BKZ1 582 aaKnown RBP11.76□□□□□ -0.53
AP001043.1-202ENST00000380931 ABCC9O60706 1549 aa11.72□□□□□ -0.53
AP001043.1-202ENST00000380931 NEFMP07197 916 aa11.71□□□□□ -0.53
AP001043.1-202ENST00000380931 ANP32CO43423 234 aa11.7□□□□□ -0.54
AP001043.1-202ENST00000380931 BCANQ96GW7 911 aa11.69□□□□□ -0.54
AP001043.1-202ENST00000380931 ACIN1Q9UKV3 1341 aaKnown RBP11.68□□□□□ -0.54
AP001043.1-202ENST00000380931 SLC24A1O60721 1099 aa11.68□□□□□ -0.54
AP001043.1-202ENST00000380931 CANXP27824 592 aaKnown RBP11.64□□□□□ -0.55
AP001043.1-202ENST00000380931 CDK11AQ9UQ88 783 aaPredicted RBP11.61□□□□□ -0.55
AP001043.1-202ENST00000380931 ESF1Q9H501 851 aaKnown RBP11.6□□□□□ -0.55
AP001043.1-202ENST00000380931 P3H3Q8IVL6 736 aa11.57□□□□□ -0.56
AP001043.1-202ENST00000380931 ARID3CA6NKF2 412 aa11.57□□□□□ -0.56
AP001043.1-202ENST00000380931 ZNF777Q9ULD5 760 aaPredicted RBP11.56□□□□□ -0.56
AP001043.1-202ENST00000380931 CSRNP3Q8WYN3 585 aa11.53□□□□□ -0.56
AP001043.1-202ENST00000380931 NPM1P06748 294 aaKnown RBP eCLIP11.5□□□□□ -0.57
AP001043.1-202ENST00000380931 STAG3Q9UJ98 1225 aa11.5□□□□□ -0.57
AP001043.1-202ENST00000380931 CHGAP10645 457 aaKnown RBP11.47□□□□□ -0.57
AP001043.1-202ENST00000380931 ANP32EQ9BTT0 268 aa11.46□□□□□ -0.57
AP001043.1-202ENST00000380931 ANP32AP39687 249 aaKnown RBP11.43□□□□□ -0.58
AP001043.1-202ENST00000380931 TONSLQ96HA7 1378 aa11.39□□□□□ -0.59
AP001043.1-202ENST00000380931 PLPPR3Q6T4P5 718 aa11.38□□□□□ -0.59
AP001043.1-202ENST00000380931 HSP90AA1P07900 732 aaKnown RBP11.36□□□□□ -0.59
AP001043.1-202ENST00000380931 UPF2Q9HAU5 1272 aaKnown RBP11.35□□□□□ -0.59
AP001043.1-202ENST00000380931 ANP32BQ92688 251 aaKnown RBP11.35□□□□□ -0.59
AP001043.1-202ENST00000380931 NPM2Q86SE8 214 aaKnown RBP11.33□□□□□ -0.6
AP001043.1-202ENST00000380931 TSPY4P0CV99 314 aa11.32□□□□□ -0.6
AP001043.1-202ENST00000380931 TSPY10P0CW01 314 aa11.32□□□□□ -0.6
AP001043.1-202ENST00000380931 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.31□□□□□ -0.6
AP001043.1-202ENST00000380931 HNRNPUQ00839 825 aaKnown RBP eCLIP11.29□□□□□ -0.6
AP001043.1-202ENST00000380931 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.29□□□□□ -0.6
AP001043.1-202ENST00000380931 TMC1Q8TDI8 760 aa11.28□□□□□ -0.6
AP001043.1-202ENST00000380931 MYO15BQ96JP2 1530 aa11.27□□□□□ -0.6
AP001043.1-202ENST00000380931 FAM9BQ8IZU0 186 aa11.27□□□□□ -0.61
AP001043.1-202ENST00000380931 DCAF1Q9Y4B6 1507 aa11.26□□□□□ -0.61
AP001043.1-202ENST00000380931 CHIC2Q9UKJ5 165 aa11.26□□□□□ -0.61
AP001043.1-202ENST00000380931 WDR43Q15061 677 aaKnown RBP eCLIP11.26□□□□□ -0.61
AP001043.1-202ENST00000380931 DDX10Q13206 875 aaKnown RBP11.25□□□□□ -0.61
AP001043.1-202ENST00000380931 EIF5BO60841 1220 aaKnown RBP11.24□□□□□ -0.61
AP001043.1-202ENST00000380931 SALL2Q9Y467 1007 aaPredicted RBP11.24□□□□□ -0.61
AP001043.1-202ENST00000380931 FKBP8Q14318 412 aa11.24□□□□□ -0.61
AP001043.1-202ENST00000380931 ZCCHC6Q5VYS8 1495 aaKnown RBP11.24□□□□□ -0.61
AP001043.1-202ENST00000380931 CHMP7Q8WUX9 453 aaPredicted RBP11.24□□□□□ -0.61
AP001043.1-202ENST00000380931 SCRIBQ14160 1630 aa11.22□□□□□ -0.61
AP001043.1-202ENST00000380931 KDM2AQ9Y2K7 1162 aa11.21□□□□□ -0.61
AP001043.1-202ENST00000380931 MTUS2Q5JR59 1369 aa11.21□□□□□ -0.62
AP001043.1-202ENST00000380931 CCDC136Q96JN2 1154 aa11.2□□□□□ -0.62
AP001043.1-202ENST00000380931 A0A0G2JS52 829 aa11.19□□□□□ -0.62
AP001043.1-202ENST00000380931 MYH16Q9H6N6 1097 aa11.18□□□□□ -0.62
AP001043.1-202ENST00000380931 PPP1R15AO75807 674 aaPredicted RBP11.18□□□□□ -0.62
AP001043.1-202ENST00000380931 MRS2Q9HD23 443 aa11.18□□□□□ -0.62
AP001043.1-202ENST00000380931 C14orf37Q86TY3 774 aa11.14□□□□□ -0.63
AP001043.1-202ENST00000380931 PLEKHD1A6NEE1 506 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms