RNA–Protein interactions for RNA: ENST00000564534.1

LINC01858-201, Transcript of long intergenic non-protein coding RNA 1858, humanhuman

TSL 1 (best) BASIC

Gene LINC01858, Length 1,838 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01858-201ENST00000564534 AEBP2Q6ZN18 517 aaPredicted RBP25.42■■□□□ 1.66
LINC01858-201ENST00000564534 CHIC1Q5VXU3 224 aa24.54■■□□□ 1.52
LINC01858-201ENST00000564534 SENP3Q9H4L4 574 aaPredicted RBP21.78■■□□□ 1.08
LINC01858-201ENST00000564534 PHF23Q9BUL5 403 aaPredicted RBP21.48■■□□□ 1.03
LINC01858-201ENST00000564534 NISCHQ9Y2I1 1504 aa21.17■□□□□ 0.98
LINC01858-201ENST00000564534 FOXD1Q16676 465 aa20.17■□□□□ 0.82
LINC01858-201ENST00000564534 PLPPR3Q6T4P5 718 aa19.81■□□□□ 0.76
LINC01858-201ENST00000564534 ADRA2BP18089 450 aa19.05■□□□□ 0.64
LINC01858-201ENST00000564534 PPP6R1Q9UPN7 881 aa19.04■□□□□ 0.64
LINC01858-201ENST00000564534 PIAS4Q8N2W9 510 aaPredicted RBP19■□□□□ 0.63
LINC01858-201ENST00000564534 MSH5O43196 834 aa18.87■□□□□ 0.61
LINC01858-201ENST00000564534 CCDC180Q9P1Z9 1646 aa18.69■□□□□ 0.58
LINC01858-201ENST00000564534 ABCC9O60706 1549 aa17.97■□□□□ 0.47
LINC01858-201ENST00000564534 POTEDQ86YR6 584 aa17.78■□□□□ 0.44
LINC01858-201ENST00000564534 ZCCHC6Q5VYS8 1495 aaKnown RBP17.7■□□□□ 0.42
LINC01858-201ENST00000564534 SCAF1Q9H7N4 1312 aaKnown RBP17.59■□□□□ 0.41
LINC01858-201ENST00000564534 DCAF8L2P0C7V8 631 aa17.58■□□□□ 0.41
LINC01858-201ENST00000564534 DCAF1Q9Y4B6 1507 aa17.53■□□□□ 0.4
LINC01858-201ENST00000564534 NACADO15069 1562 aa17.5■□□□□ 0.39
LINC01858-201ENST00000564534 MYO15BQ96JP2 1530 aa17.5■□□□□ 0.39
LINC01858-201ENST00000564534 RB1CC1Q8TDY2 1594 aa17.45■□□□□ 0.38
LINC01858-201ENST00000564534 MAPK8IP2Q13387 824 aaPredicted RBP17.37■□□□□ 0.37
LINC01858-201ENST00000564534 PPP4R3CPQ6ZMV5 832 aa17.37■□□□□ 0.37
LINC01858-201ENST00000564534 DMRT2Q9Y5R5 561 aa17.28■□□□□ 0.36
LINC01858-201ENST00000564534 SCRIBQ14160 1630 aa17.08■□□□□ 0.32
LINC01858-201ENST00000564534 UNC13AQ9UPW8 1703 aa17.03■□□□□ 0.32
LINC01858-201ENST00000564534 CNKSR2Q8WXI2 1034 aa17■□□□□ 0.31
LINC01858-201ENST00000564534 SHROOM4Q9ULL8 1493 aa16.92■□□□□ 0.3
LINC01858-201ENST00000564534 NCBP3Q53F19 620 aaKnown RBP16.9■□□□□ 0.3
LINC01858-201ENST00000564534 BICRAQ9NZM4 1560 aa16.86■□□□□ 0.29
LINC01858-201ENST00000564534 PABPN1Q86U42 306 aaKnown RBP eCLIP16.85■□□□□ 0.29
LINC01858-201ENST00000564534 HOXD11P31277 338 aaPredicted RBP16.76■□□□□ 0.27
LINC01858-201ENST00000564534 RNF216Q9NWF9 866 aaPredicted RBP16.75■□□□□ 0.27
LINC01858-201ENST00000564534 DCAF8L1A6NGE4 600 aa16.63■□□□□ 0.25
LINC01858-201ENST00000564534 NPM3O75607 178 aaKnown RBP16.53■□□□□ 0.24
LINC01858-201ENST00000564534 KCNA4P22459 653 aa16.48■□□□□ 0.23
LINC01858-201ENST00000564534 CECR2Q9BXF3 1484 aa16.43■□□□□ 0.22
LINC01858-201ENST00000564534 EIF4G1Q04637 1599 aaKnown RBP16.43■□□□□ 0.22
LINC01858-201ENST00000564534 BAZ1AQ9NRL2 1556 aaPredicted RBP16.41■□□□□ 0.22
LINC01858-201ENST00000564534 SMARCA4P51532 1647 aa16.36■□□□□ 0.21
LINC01858-201ENST00000564534 MROH2BQ7Z745 1585 aa16.31■□□□□ 0.2
LINC01858-201ENST00000564534 CC2D2AQ9P2K1 1620 aa16.27■□□□□ 0.2
LINC01858-201ENST00000564534 RSF1Q96T23 1441 aaPredicted RBP16.24■□□□□ 0.19
LINC01858-201ENST00000564534 SMARCA2P51531 1590 aa16.21■□□□□ 0.19
LINC01858-201ENST00000564534 PEG3Q9GZU2 1588 aa16.19■□□□□ 0.18
LINC01858-201ENST00000564534 ATAD2BQ9ULI0 1458 aa16.19■□□□□ 0.18
LINC01858-201ENST00000564534 DNAJC5BQ9UF47 199 aa16.17■□□□□ 0.18
LINC01858-201ENST00000564534 WIZO95785 1651 aa16.15■□□□□ 0.18
LINC01858-201ENST00000564534 NCAPD3P42695 1498 aa16.13■□□□□ 0.17
LINC01858-201ENST00000564534 HMGXB3Q12766 1538 aa16.1■□□□□ 0.17
LINC01858-201ENST00000564534 BAZ1BQ9UIG0 1483 aaKnown RBP16.09■□□□□ 0.17
LINC01858-201ENST00000564534 SUPT5HO00267 1087 aaKnown RBP16.08■□□□□ 0.17
LINC01858-201ENST00000564534 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.05■□□□□ 0.16
LINC01858-201ENST00000564534 RNF39Q9H2S5 420 aa16.05■□□□□ 0.16
LINC01858-201ENST00000564534 TOP2AP11388 1531 aaKnown RBP16.02■□□□□ 0.15
LINC01858-201ENST00000564534 CACNB1Q02641 598 aaPredicted RBP15.98■□□□□ 0.15
LINC01858-201ENST00000564534 C1QBPQ07021 282 aaKnown RBP15.89■□□□□ 0.13
LINC01858-201ENST00000564534 CCDC88BA6NC98 1476 aa15.82■□□□□ 0.12
LINC01858-201ENST00000564534 SLC4A1APQ9BWU0 796 aaKnown RBP15.7■□□□□ 0.1
LINC01858-201ENST00000564534 CADPSQ9ULU8 1353 aa15.69■□□□□ 0.1
LINC01858-201ENST00000564534 LAMC3Q9Y6N6 1575 aa15.68■□□□□ 0.1
LINC01858-201ENST00000564534 SLC4A2P04920 1241 aa15.66■□□□□ 0.1
LINC01858-201ENST00000564534 U3KPZ7 1027 aaPredicted RBP15.66■□□□□ 0.1
LINC01858-201ENST00000564534 CFTRP13569 1480 aa15.65■□□□□ 0.1
LINC01858-201ENST00000564534 NESP48681 1621 aa15.63■□□□□ 0.09
LINC01858-201ENST00000564534 PRDM2Q13029 1718 aa15.57■□□□□ 0.08
LINC01858-201ENST00000564534 PDS5BQ9NTI5 1447 aa15.57■□□□□ 0.08
LINC01858-201ENST00000564534 FANCD2Q9BXW9 1451 aa15.51■□□□□ 0.07
LINC01858-201ENST00000564534 ERCC6Q03468 1493 aa15.5■□□□□ 0.07
LINC01858-201ENST00000564534 CEP164Q9UPV0 1460 aa15.47■□□□□ 0.07
LINC01858-201ENST00000564534 KIF21AQ7Z4S6 1674 aa15.47■□□□□ 0.07
LINC01858-201ENST00000564534 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.46■□□□□ 0.07
LINC01858-201ENST00000564534 HNRNPUL2Q1KMD3 747 aaKnown RBP15.46■□□□□ 0.07
LINC01858-201ENST00000564534 APLP2Q06481 763 aa15.45■□□□□ 0.06
LINC01858-201ENST00000564534 CAPN15O75808 1086 aa15.38■□□□□ 0.05
LINC01858-201ENST00000564534 MRC2Q9UBG0 1479 aa15.38■□□□□ 0.05
LINC01858-201ENST00000564534 SAMD1Q6SPF0 538 aaPredicted RBP15.36■□□□□ 0.05
LINC01858-201ENST00000564534 FOXD4L1Q9NU39 408 aa15.36■□□□□ 0.05
LINC01858-201ENST00000564534 MYCNP04198 464 aaPredicted RBP15.36■□□□□ 0.05
LINC01858-201ENST00000564534 ABCC8Q09428 1581 aa15.34■□□□□ 0.05
LINC01858-201ENST00000564534 THOC2Q8NI27 1593 aaKnown RBP15.34■□□□□ 0.05
LINC01858-201ENST00000564534 WRNQ14191 1432 aaPredicted RBP eCLIP15.33■□□□□ 0.04
LINC01858-201ENST00000564534 SPINK5Q9NQ38 1064 aaPredicted RBP15.32■□□□□ 0.04
LINC01858-201ENST00000564534 URB2Q14146 1524 aaKnown RBP15.32■□□□□ 0.04
LINC01858-201ENST00000564534 DNMBPQ6XZF7 1577 aa15.31■□□□□ 0.04
LINC01858-201ENST00000564534 WDR62O43379 1518 aa15.31■□□□□ 0.04
LINC01858-201ENST00000564534 TOPBP1Q92547 1522 aa15.29■□□□□ 0.04
LINC01858-201ENST00000564534 CUX1P39880 1505 aa15.28■□□□□ 0.04
LINC01858-201ENST00000564534 TOP2BQ02880 1626 aa15.25■□□□□ 0.03
LINC01858-201ENST00000564534 SYNJ1O43426 1573 aa15.25■□□□□ 0.03
LINC01858-201ENST00000564534 BIVM-ERCC5R4GMW8 1640 aa15.24■□□□□ 0.03
LINC01858-201ENST00000564534 CUX2O14529 1486 aa15.21■□□□□ 0.03
LINC01858-201ENST00000564534 ZNF219Q9P2Y4 722 aaPredicted RBP15.21■□□□□ 0.03
LINC01858-201ENST00000564534 TRHP20396 242 aaPredicted RBP15.2■□□□□ 0.02
LINC01858-201ENST00000564534 TRIM41Q8WV44 630 aa15.2■□□□□ 0.02
LINC01858-201ENST00000564534 FGD5Q6ZNL6 1462 aa15.19■□□□□ 0.02
LINC01858-201ENST00000564534 POLA1P09884 1462 aaPredicted RBP15.18■□□□□ 0.02
LINC01858-201ENST00000564534 IFT140Q96RY7 1462 aa15.13■□□□□ 0.01
LINC01858-201ENST00000564534 SOGA1O94964 1423 aa15.13■□□□□ 0.01
LINC01858-201ENST00000564534 DSG3P32926 999 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms