RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 AEBP2Q6ZN18 517 aaPredicted RBP26.68■■□□□ 1.86
NR1I3-230ENST00000511944 CHIC1Q5VXU3 224 aa25.99■■□□□ 1.75
NR1I3-230ENST00000511944 PHF23Q9BUL5 403 aaPredicted RBP22.97■■□□□ 1.27
NR1I3-230ENST00000511944 SENP3Q9H4L4 574 aaPredicted RBP22.44■■□□□ 1.18
NR1I3-230ENST00000511944 PLPPR3Q6T4P5 718 aa21.05■□□□□ 0.96
NR1I3-230ENST00000511944 FOXD1Q16676 465 aa20.94■□□□□ 0.94
NR1I3-230ENST00000511944 NISCHQ9Y2I1 1504 aa20.91■□□□□ 0.94
NR1I3-230ENST00000511944 PPP6R1Q9UPN7 881 aa20.27■□□□□ 0.84
NR1I3-230ENST00000511944 ADRA2BP18089 450 aa20.21■□□□□ 0.83
NR1I3-230ENST00000511944 PIAS4Q8N2W9 510 aaPredicted RBP19.69■□□□□ 0.74
NR1I3-230ENST00000511944 MSH5O43196 834 aa19.14■□□□□ 0.65
NR1I3-230ENST00000511944 PPP4R3CPQ6ZMV5 832 aa18.62■□□□□ 0.57
NR1I3-230ENST00000511944 CCDC180Q9P1Z9 1646 aa18.4■□□□□ 0.54
NR1I3-230ENST00000511944 MAPK8IP2Q13387 824 aaPredicted RBP18.36■□□□□ 0.53
NR1I3-230ENST00000511944 KCNA4P22459 653 aa18.3■□□□□ 0.52
NR1I3-230ENST00000511944 SCAF1Q9H7N4 1312 aaKnown RBP18.27■□□□□ 0.52
NR1I3-230ENST00000511944 CNKSR2Q8WXI2 1034 aa18.03■□□□□ 0.48
NR1I3-230ENST00000511944 NCBP3Q53F19 620 aaKnown RBP18.02■□□□□ 0.48
NR1I3-230ENST00000511944 DMRT2Q9Y5R5 561 aa17.97■□□□□ 0.47
NR1I3-230ENST00000511944 NPM3O75607 178 aaKnown RBP17.91■□□□□ 0.46
NR1I3-230ENST00000511944 RNF216Q9NWF9 866 aaPredicted RBP17.67■□□□□ 0.42
NR1I3-230ENST00000511944 HOXD11P31277 338 aaPredicted RBP17.62■□□□□ 0.41
NR1I3-230ENST00000511944 ZCCHC6Q5VYS8 1495 aaKnown RBP17.58■□□□□ 0.41
NR1I3-230ENST00000511944 POTEDQ86YR6 584 aa17.47■□□□□ 0.39
NR1I3-230ENST00000511944 DCAF1Q9Y4B6 1507 aa17.46■□□□□ 0.39
NR1I3-230ENST00000511944 SLC4A1APQ9BWU0 796 aaKnown RBP17.36■□□□□ 0.37
NR1I3-230ENST00000511944 MYO15BQ96JP2 1530 aa17.34■□□□□ 0.37
NR1I3-230ENST00000511944 DNAJC5BQ9UF47 199 aa17.31■□□□□ 0.36
NR1I3-230ENST00000511944 ABCC9O60706 1549 aa17.21■□□□□ 0.35
NR1I3-230ENST00000511944 DCAF8L1A6NGE4 600 aa17.16■□□□□ 0.34
NR1I3-230ENST00000511944 NACADO15069 1562 aa17.14■□□□□ 0.33
NR1I3-230ENST00000511944 RB1CC1Q8TDY2 1594 aa16.98■□□□□ 0.31
NR1I3-230ENST00000511944 DCAF8L2P0C7V8 631 aa16.97■□□□□ 0.31
NR1I3-230ENST00000511944 EHMT2Q96KQ7 1210 aa16.97■□□□□ 0.31
NR1I3-230ENST00000511944 SLC4A2P04920 1241 aa16.95■□□□□ 0.3
NR1I3-230ENST00000511944 ZBTB22O15209 634 aa16.91■□□□□ 0.3
NR1I3-230ENST00000511944 CSRNP3Q8WYN3 585 aa16.8■□□□□ 0.28
NR1I3-230ENST00000511944 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.75■□□□□ 0.27
NR1I3-230ENST00000511944 FOXD4L1Q9NU39 408 aa16.74■□□□□ 0.27
NR1I3-230ENST00000511944 SCRIBQ14160 1630 aa16.67■□□□□ 0.26
NR1I3-230ENST00000511944 SHROOM4Q9ULL8 1493 aa16.67■□□□□ 0.26
NR1I3-230ENST00000511944 U3KPZ7 1027 aaPredicted RBP16.57■□□□□ 0.24
NR1I3-230ENST00000511944 RNF39Q9H2S5 420 aa16.51■□□□□ 0.23
NR1I3-230ENST00000511944 UNC13AQ9UPW8 1703 aa16.48■□□□□ 0.23
NR1I3-230ENST00000511944 MYCNP04198 464 aaPredicted RBP16.46■□□□□ 0.23
NR1I3-230ENST00000511944 BICRAQ9NZM4 1560 aa16.38■□□□□ 0.21
NR1I3-230ENST00000511944 C1QBPQ07021 282 aaKnown RBP16.23■□□□□ 0.19
NR1I3-230ENST00000511944 BAZ1AQ9NRL2 1556 aaPredicted RBP16.2■□□□□ 0.18
NR1I3-230ENST00000511944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.18■□□□□ 0.18
NR1I3-230ENST00000511944 HNRNPUL2Q1KMD3 747 aaKnown RBP16.18■□□□□ 0.18
NR1I3-230ENST00000511944 SAMD1Q6SPF0 538 aaPredicted RBP16.18■□□□□ 0.18
NR1I3-230ENST00000511944 ATF5Q9Y2D1 282 aaPredicted RBP16.18■□□□□ 0.18
NR1I3-230ENST00000511944 RSF1Q96T23 1441 aaPredicted RBP16.13■□□□□ 0.17
NR1I3-230ENST00000511944 SPINK5Q9NQ38 1064 aaPredicted RBP16.13■□□□□ 0.17
NR1I3-230ENST00000511944 CECR2Q9BXF3 1484 aa16.12■□□□□ 0.17
NR1I3-230ENST00000511944 ATXN8OSP0DMR3 200 aa16.11■□□□□ 0.17
NR1I3-230ENST00000511944 PABPN1Q86U42 306 aaKnown RBP eCLIP16.11■□□□□ 0.17
NR1I3-230ENST00000511944 SMARCA4P51532 1647 aa16.08■□□□□ 0.17
NR1I3-230ENST00000511944 MROH2BQ7Z745 1585 aa16.06■□□□□ 0.16
NR1I3-230ENST00000511944 SUPT5HO00267 1087 aaKnown RBP16.02■□□□□ 0.16
NR1I3-230ENST00000511944 PEG3Q9GZU2 1588 aa16.01■□□□□ 0.15
NR1I3-230ENST00000511944 CACNB1Q02641 598 aaPredicted RBP15.99■□□□□ 0.15
NR1I3-230ENST00000511944 CAPN15O75808 1086 aa15.96■□□□□ 0.15
NR1I3-230ENST00000511944 APLP2Q06481 763 aa15.96■□□□□ 0.15
NR1I3-230ENST00000511944 SMARCA2P51531 1590 aa15.92■□□□□ 0.14
NR1I3-230ENST00000511944 TRHP20396 242 aaPredicted RBP15.91■□□□□ 0.14
NR1I3-230ENST00000511944 EIF4G1Q04637 1599 aaKnown RBP15.91■□□□□ 0.14
NR1I3-230ENST00000511944 WIZO95785 1651 aa15.88■□□□□ 0.13
NR1I3-230ENST00000511944 TOP2AP11388 1531 aaKnown RBP15.87■□□□□ 0.13
NR1I3-230ENST00000511944 ATAD2BQ9ULI0 1458 aa15.84■□□□□ 0.13
NR1I3-230ENST00000511944 ZNF219Q9P2Y4 722 aaPredicted RBP15.83■□□□□ 0.12
NR1I3-230ENST00000511944 HMGXB3Q12766 1538 aa15.8■□□□□ 0.12
NR1I3-230ENST00000511944 NCAPD3P42695 1498 aa15.79■□□□□ 0.12
NR1I3-230ENST00000511944 BAZ1BQ9UIG0 1483 aaKnown RBP15.74■□□□□ 0.11
NR1I3-230ENST00000511944 DSG3P32926 999 aa15.74■□□□□ 0.11
NR1I3-230ENST00000511944 ABCB7O75027 752 aa15.72■□□□□ 0.11
NR1I3-230ENST00000511944 POLA2Q14181 598 aa15.68■□□□□ 0.1
NR1I3-230ENST00000511944 CC2D2AQ9P2K1 1620 aa15.65■□□□□ 0.1
NR1I3-230ENST00000511944 CCDC88BA6NC98 1476 aa15.61■□□□□ 0.09
NR1I3-230ENST00000511944 MKRN4PQ13434 485 aaPredicted RBP15.46■□□□□ 0.07
NR1I3-230ENST00000511944 CFTRP13569 1480 aa15.39■□□□□ 0.05
NR1I3-230ENST00000511944 CADPSQ9ULU8 1353 aa15.32■□□□□ 0.04
NR1I3-230ENST00000511944 PRDM2Q13029 1718 aa15.31■□□□□ 0.04
NR1I3-230ENST00000511944 FBLN2P98095 1184 aa15.28■□□□□ 0.04
NR1I3-230ENST00000511944 ZBTB12Q9Y330 459 aaPredicted RBP15.28■□□□□ 0.04
NR1I3-230ENST00000511944 LAMC3Q9Y6N6 1575 aa15.28■□□□□ 0.04
NR1I3-230ENST00000511944 WRNQ14191 1432 aaPredicted RBP eCLIP15.21■□□□□ 0.03
NR1I3-230ENST00000511944 TRIM41Q8WV44 630 aa15.18■□□□□ 0.02
NR1I3-230ENST00000511944 ABCC8Q09428 1581 aa15.16■□□□□ 0.02
NR1I3-230ENST00000511944 OSCARQ8IYS5 282 aa15.16■□□□□ 0.02
NR1I3-230ENST00000511944 PDS5BQ9NTI5 1447 aa15.14■□□□□ 0.01
NR1I3-230ENST00000511944 TOP2BQ02880 1626 aa15.14■□□□□ 0.01
NR1I3-230ENST00000511944 BIVM-ERCC5R4GMW8 1640 aa15.14■□□□□ 0.01
NR1I3-230ENST00000511944 FKBP8Q14318 412 aa15.12■□□□□ 0.01
NR1I3-230ENST00000511944 FANCD2Q9BXW9 1451 aa15.12■□□□□ 0.01
NR1I3-230ENST00000511944 SYNJ1O43426 1573 aa15.09■□□□□ 0.01
NR1I3-230ENST00000511944 EEA1Q15075 1411 aa15.08■□□□□ 0
NR1I3-230ENST00000511944 CEP164Q9UPV0 1460 aa15.07■□□□□ 0
NR1I3-230ENST00000511944 NESP48681 1621 aa15.06■□□□□ 0
NR1I3-230ENST00000511944 CUX1P39880 1505 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms