RNA–Protein interactions for RNA: ENST00000355637.8

RBFOX1-203, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-203ENST00000355637 PELP1Q8IZL8 1130 aaKnown RBP16.01■□□□□ 0.15
RBFOX1-203ENST00000355637 NISCHQ9Y2I1 1504 aa15.97■□□□□ 0.15
RBFOX1-203ENST00000355637 MYT1Q01538 1121 aa15.68■□□□□ 0.1
RBFOX1-203ENST00000355637 PRKCSHP14314 528 aaPredicted RBP15.01□□□□□ -0.01
RBFOX1-203ENST00000355637 TTBK1Q5TCY1 1321 aaPredicted RBP14.93□□□□□ -0.02
RBFOX1-203ENST00000355637 HRCP23327 699 aa14.92□□□□□ -0.02
RBFOX1-203ENST00000355637 PPARGC1BQ86YN6 1023 aaKnown RBP14.85□□□□□ -0.03
RBFOX1-203ENST00000355637 SCAF1Q9H7N4 1312 aaKnown RBP14.81□□□□□ -0.04
RBFOX1-203ENST00000355637 BCL11AQ9H165 835 aa14.73□□□□□ -0.05
RBFOX1-203ENST00000355637 ERICH6Q7L0X2 663 aa14.58□□□□□ -0.08
RBFOX1-203ENST00000355637 FAM9AQ8IZU1 332 aaPredicted RBP14.55□□□□□ -0.08
RBFOX1-203ENST00000355637 PCGF6Q9BYE7 350 aa14.39□□□□□ -0.11
RBFOX1-203ENST00000355637 APLP2Q06481 763 aa14.32□□□□□ -0.12
RBFOX1-203ENST00000355637 SLC24A1O60721 1099 aa14.31□□□□□ -0.12
RBFOX1-203ENST00000355637 CENPBP07199 599 aaPredicted RBP14.29□□□□□ -0.12
RBFOX1-203ENST00000355637 GTF3C3Q9Y5Q9 886 aa14.2□□□□□ -0.14
RBFOX1-203ENST00000355637 ACIN1Q9UKV3 1341 aaKnown RBP14.09□□□□□ -0.15
RBFOX1-203ENST00000355637 NEUROD1Q13562 356 aa14.07□□□□□ -0.16
RBFOX1-203ENST00000355637 SHROOM4Q9ULL8 1493 aa14.05□□□□□ -0.16
RBFOX1-203ENST00000355637 ANP32EQ9BTT0 268 aa13.92□□□□□ -0.18
RBFOX1-203ENST00000355637 CSRNP3Q8WYN3 585 aa13.9□□□□□ -0.18
RBFOX1-203ENST00000355637 SUPT5HO00267 1087 aaKnown RBP13.86□□□□□ -0.19
RBFOX1-203ENST00000355637 EIF5BO60841 1220 aaKnown RBP13.84□□□□□ -0.19
RBFOX1-203ENST00000355637 ANO8Q9HCE9 1232 aaPredicted RBP13.79□□□□□ -0.2
RBFOX1-203ENST00000355637 DCAF8L2P0C7V8 631 aa13.73□□□□□ -0.21
RBFOX1-203ENST00000355637 PLEKHG5O94827 1062 aa13.7□□□□□ -0.22
RBFOX1-203ENST00000355637 ZEB1P37275 1124 aaPredicted RBP13.69□□□□□ -0.22
RBFOX1-203ENST00000355637 DAXXQ9UER7 740 aaPredicted RBP13.65□□□□□ -0.22
RBFOX1-203ENST00000355637 YTHDC1Q96MU7 727 aaKnown RBP13.59□□□□□ -0.23
RBFOX1-203ENST00000355637 CCDC136Q96JN2 1154 aa13.59□□□□□ -0.23
RBFOX1-203ENST00000355637 ZCCHC6Q5VYS8 1495 aaKnown RBP13.49□□□□□ -0.25
RBFOX1-203ENST00000355637 UBE2Q2Q8WVN8 375 aa13.45□□□□□ -0.26
RBFOX1-203ENST00000355637 SALL2Q9Y467 1007 aaPredicted RBP13.45□□□□□ -0.26
RBFOX1-203ENST00000355637 PODXL2Q9NZ53 605 aa13.44□□□□□ -0.26
RBFOX1-203ENST00000355637 CCDC180Q9P1Z9 1646 aa13.37□□□□□ -0.27
RBFOX1-203ENST00000355637 DIEXFQ68CQ4 756 aaKnown RBP13.36□□□□□ -0.27
RBFOX1-203ENST00000355637 TRIM26Q12899 539 aaPredicted RBP13.36□□□□□ -0.27
RBFOX1-203ENST00000355637 PKNOX2Q96KN3 472 aa13.35□□□□□ -0.27
RBFOX1-203ENST00000355637 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.34□□□□□ -0.27
RBFOX1-203ENST00000355637 CHIC1Q5VXU3 224 aa13.33□□□□□ -0.28
RBFOX1-203ENST00000355637 TSHZ2Q9NRE2 1034 aa13.33□□□□□ -0.28
RBFOX1-203ENST00000355637 MYO15BQ96JP2 1530 aa13.27□□□□□ -0.28
RBFOX1-203ENST00000355637 RTN4Q9NQC3 1192 aaKnown RBP13.17□□□□□ -0.3
RBFOX1-203ENST00000355637 DEKP35659 375 aaKnown RBP13.13□□□□□ -0.31
RBFOX1-203ENST00000355637 SUPT16HQ9Y5B9 1047 aaKnown RBP13.1□□□□□ -0.31
RBFOX1-203ENST00000355637 LOC105371045A0A1W2PR82 267 aa13.05□□□□□ -0.32
RBFOX1-203ENST00000355637 AEBP2Q6ZN18 517 aaPredicted RBP13.05□□□□□ -0.32
RBFOX1-203ENST00000355637 BCANQ96GW7 911 aa13.04□□□□□ -0.32
RBFOX1-203ENST00000355637 A0A0U1RQG5 324 aaPredicted RBP13.01□□□□□ -0.33
RBFOX1-203ENST00000355637 RBM19Q9Y4C8 960 aaKnown RBP12.97□□□□□ -0.33
RBFOX1-203ENST00000355637 CCER1Q8TC90 406 aaPredicted RBP12.97□□□□□ -0.33
RBFOX1-203ENST00000355637 ERICH6BQ5W0A0 696 aa12.96□□□□□ -0.33
RBFOX1-203ENST00000355637 DCAF1Q9Y4B6 1507 aa12.96□□□□□ -0.33
RBFOX1-203ENST00000355637 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.94□□□□□ -0.34
RBFOX1-203ENST00000355637 IL27Q8NEV9 243 aa12.93□□□□□ -0.34
RBFOX1-203ENST00000355637 NEFLP07196 543 aa12.91□□□□□ -0.34
RBFOX1-203ENST00000355637 MSH5O43196 834 aa12.9□□□□□ -0.34
RBFOX1-203ENST00000355637 MIER1Q8N108 512 aa12.9□□□□□ -0.34
RBFOX1-203ENST00000355637 PDE4CQ08493 712 aa12.89□□□□□ -0.35
RBFOX1-203ENST00000355637 MYT1LQ9UL68 1186 aa12.87□□□□□ -0.35
RBFOX1-203ENST00000355637 NBR1Q14596 966 aa12.87□□□□□ -0.35
RBFOX1-203ENST00000355637 EHMT2Q96KQ7 1210 aa12.87□□□□□ -0.35
RBFOX1-203ENST00000355637 TIMELESSQ9UNS1 1208 aa12.85□□□□□ -0.35
RBFOX1-203ENST00000355637 VSIG10Q8N0Z9 540 aa12.84□□□□□ -0.35
RBFOX1-203ENST00000355637 TRIM41Q8WV44 630 aa12.83□□□□□ -0.35
RBFOX1-203ENST00000355637 ZMYND15Q9H091 742 aa12.81□□□□□ -0.36
RBFOX1-203ENST00000355637 PDIA4P13667 645 aaKnown RBP12.8□□□□□ -0.36
RBFOX1-203ENST00000355637 SCRIBQ14160 1630 aa12.8□□□□□ -0.36
RBFOX1-203ENST00000355637 GLIPR1L2Q4G1C9 344 aa12.8□□□□□ -0.36
RBFOX1-203ENST00000355637 KLHL34Q8N239 644 aa12.79□□□□□ -0.36
RBFOX1-203ENST00000355637 BCL11BQ9C0K0 894 aaPredicted RBP12.76□□□□□ -0.37
RBFOX1-203ENST00000355637 ITGAEP38570 1179 aa12.75□□□□□ -0.37
RBFOX1-203ENST00000355637 CLSPNQ9HAW4 1339 aa12.75□□□□□ -0.37
RBFOX1-203ENST00000355637 RSF1Q96T23 1441 aaPredicted RBP12.74□□□□□ -0.37
RBFOX1-203ENST00000355637 ZNF316A6NFI3 1004 aaPredicted RBP12.74□□□□□ -0.37
RBFOX1-203ENST00000355637 ABCC9O60706 1549 aa12.73□□□□□ -0.37
RBFOX1-203ENST00000355637 FKBP8Q14318 412 aa12.7□□□□□ -0.38
RBFOX1-203ENST00000355637 RTL5Q5HYW3 569 aaPredicted RBP12.67□□□□□ -0.38
RBFOX1-203ENST00000355637 FGD1P98174 961 aa12.67□□□□□ -0.38
RBFOX1-203ENST00000355637 RBM10P98175 930 aaKnown RBP12.65□□□□□ -0.38
RBFOX1-203ENST00000355637 RANGAP1P46060 587 aaPredicted RBP12.64□□□□□ -0.39
RBFOX1-203ENST00000355637 RB1CC1Q8TDY2 1594 aa12.6□□□□□ -0.39
RBFOX1-203ENST00000355637 AAMPQ13685 434 aa12.57□□□□□ -0.4
RBFOX1-203ENST00000355637 CECR2Q9BXF3 1484 aa12.54□□□□□ -0.4
RBFOX1-203ENST00000355637 FANCIQ9NVI1 1328 aa12.53□□□□□ -0.4
RBFOX1-203ENST00000355637 PAXIP1Q6ZW49 1069 aaPredicted RBP12.48□□□□□ -0.41
RBFOX1-203ENST00000355637 CDK11AQ9UQ88 783 aaPredicted RBP12.48□□□□□ -0.41
RBFOX1-203ENST00000355637 MROH2BQ7Z745 1585 aa12.47□□□□□ -0.41
RBFOX1-203ENST00000355637 NACADO15069 1562 aa12.45□□□□□ -0.42
RBFOX1-203ENST00000355637 NOP58Q9Y2X3 529 aaKnown RBP12.44□□□□□ -0.42
RBFOX1-203ENST00000355637 NCBP3Q53F19 620 aaKnown RBP12.44□□□□□ -0.42
RBFOX1-203ENST00000355637 BRPF3Q9ULD4 1205 aa12.44□□□□□ -0.42
RBFOX1-203ENST00000355637 RSPH6AQ9H0K4 717 aa12.43□□□□□ -0.42
RBFOX1-203ENST00000355637 TAF7LQ5H9L4 462 aa12.42□□□□□ -0.42
RBFOX1-203ENST00000355637 DHX37Q8IY37 1157 aaKnown RBP12.41□□□□□ -0.42
RBFOX1-203ENST00000355637 PAK3O75914 559 aaPredicted RBP12.4□□□□□ -0.42
RBFOX1-203ENST00000355637 WIZO95785 1651 aa12.38□□□□□ -0.43
RBFOX1-203ENST00000355637 HSP90AA2PQ14568 343 aaPredicted RBP12.35□□□□□ -0.43
RBFOX1-203ENST00000355637 NEFMP07197 916 aa12.34□□□□□ -0.43
RBFOX1-203ENST00000355637 CHMP4BQ9H444 224 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms