RNA–Protein interactions for RNA: ENST00000441731.6

R3HDM2-207, Transcript of R3H domain containing 2, humanhuman

TSL 5 BASIC

Gene R3HDM2, Length 4,076 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-207ENST00000441731 NISCHQ9Y2I1 1504 aa18.32■□□□□ 0.52
R3HDM2-207ENST00000441731 DCAF8L2P0C7V8 631 aa17.22■□□□□ 0.35
R3HDM2-207ENST00000441731 ABCC9O60706 1549 aa16.5■□□□□ 0.23
R3HDM2-207ENST00000441731 PABPN1Q86U42 306 aaKnown RBP eCLIP15.83■□□□□ 0.12
R3HDM2-207ENST00000441731 CCDC180Q9P1Z9 1646 aa15.78■□□□□ 0.12
R3HDM2-207ENST00000441731 SHROOM4Q9ULL8 1493 aa15.68■□□□□ 0.1
R3HDM2-207ENST00000441731 RB1CC1Q8TDY2 1594 aa15.43■□□□□ 0.06
R3HDM2-207ENST00000441731 ZCCHC6Q5VYS8 1495 aaKnown RBP15.32■□□□□ 0.04
R3HDM2-207ENST00000441731 NACADO15069 1562 aa15.27■□□□□ 0.03
R3HDM2-207ENST00000441731 SUPT5HO00267 1087 aaKnown RBP15.17■□□□□ 0.02
R3HDM2-207ENST00000441731 SCRIBQ14160 1630 aa15.11■□□□□ 0.01
R3HDM2-207ENST00000441731 DNAJC5BQ9UF47 199 aa14.85□□□□□ -0.03
R3HDM2-207ENST00000441731 DCAF1Q9Y4B6 1507 aa14.84□□□□□ -0.03
R3HDM2-207ENST00000441731 MYO15BQ96JP2 1530 aa14.79□□□□□ -0.04
R3HDM2-207ENST00000441731 CECR2Q9BXF3 1484 aa14.72□□□□□ -0.05
R3HDM2-207ENST00000441731 ERCC6Q03468 1493 aa14.57□□□□□ -0.08
R3HDM2-207ENST00000441731 CHIC1Q5VXU3 224 aa14.53□□□□□ -0.08
R3HDM2-207ENST00000441731 BAZ1BQ9UIG0 1483 aaKnown RBP14.45□□□□□ -0.1
R3HDM2-207ENST00000441731 FBLN2P98095 1184 aa14.45□□□□□ -0.1
R3HDM2-207ENST00000441731 EIF4G1Q04637 1599 aaKnown RBP14.4□□□□□ -0.1
R3HDM2-207ENST00000441731 FAM9AQ8IZU1 332 aaPredicted RBP14.39□□□□□ -0.11
R3HDM2-207ENST00000441731 BICRAQ9NZM4 1560 aa14.34□□□□□ -0.11
R3HDM2-207ENST00000441731 CC2D2AQ9P2K1 1620 aa14.34□□□□□ -0.11
R3HDM2-207ENST00000441731 BAZ1AQ9NRL2 1556 aaPredicted RBP14.34□□□□□ -0.11
R3HDM2-207ENST00000441731 RSF1Q96T23 1441 aaPredicted RBP14.32□□□□□ -0.12
R3HDM2-207ENST00000441731 SMARCA2P51531 1590 aa14.29□□□□□ -0.12
R3HDM2-207ENST00000441731 EHMT2Q96KQ7 1210 aa14.29□□□□□ -0.12
R3HDM2-207ENST00000441731 ATAD2BQ9ULI0 1458 aa14.25□□□□□ -0.13
R3HDM2-207ENST00000441731 PDS5BQ9NTI5 1447 aa14.24□□□□□ -0.13
R3HDM2-207ENST00000441731 TTBK1Q5TCY1 1321 aaPredicted RBP14.23□□□□□ -0.13
R3HDM2-207ENST00000441731 TRIM41Q8WV44 630 aa14.2□□□□□ -0.14
R3HDM2-207ENST00000441731 NCAPD3P42695 1498 aa14.16□□□□□ -0.14
R3HDM2-207ENST00000441731 RANGAP1P46060 587 aaPredicted RBP14.15□□□□□ -0.14
R3HDM2-207ENST00000441731 MROH2BQ7Z745 1585 aa14.15□□□□□ -0.14
R3HDM2-207ENST00000441731 LOC105371045A0A1W2PR82 267 aa14.14□□□□□ -0.15
R3HDM2-207ENST00000441731 CADPSQ9ULU8 1353 aa14.12□□□□□ -0.15
R3HDM2-207ENST00000441731 UNC13AQ9UPW8 1703 aa14.11□□□□□ -0.15
R3HDM2-207ENST00000441731 CHMP7Q8WUX9 453 aaPredicted RBP14.09□□□□□ -0.15
R3HDM2-207ENST00000441731 SMARCA4P51532 1647 aa14.07□□□□□ -0.16
R3HDM2-207ENST00000441731 WIZO95785 1651 aa14.05□□□□□ -0.16
R3HDM2-207ENST00000441731 ATP1B4Q9UN42 357 aaPredicted RBP14.02□□□□□ -0.17
R3HDM2-207ENST00000441731 NESP48681 1621 aa13.96□□□□□ -0.17
R3HDM2-207ENST00000441731 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.96□□□□□ -0.17
R3HDM2-207ENST00000441731 HNRNPUL2Q1KMD3 747 aaKnown RBP13.96□□□□□ -0.17
R3HDM2-207ENST00000441731 UBTFP17480 764 aaKnown RBP13.95□□□□□ -0.18
R3HDM2-207ENST00000441731 PCGF6Q9BYE7 350 aa13.95□□□□□ -0.18
R3HDM2-207ENST00000441731 CEP164Q9UPV0 1460 aa13.95□□□□□ -0.18
R3HDM2-207ENST00000441731 OSCARQ8IYS5 282 aa13.95□□□□□ -0.18
R3HDM2-207ENST00000441731 TRHP20396 242 aaPredicted RBP13.94□□□□□ -0.18
R3HDM2-207ENST00000441731 NPM1P06748 294 aaKnown RBP eCLIP13.93□□□□□ -0.18
R3HDM2-207ENST00000441731 FANCD2Q9BXW9 1451 aa13.9□□□□□ -0.18
R3HDM2-207ENST00000441731 HMGXB3Q12766 1538 aa13.87□□□□□ -0.19
R3HDM2-207ENST00000441731 CCDC88BA6NC98 1476 aa13.85□□□□□ -0.19
R3HDM2-207ENST00000441731 TOP2AP11388 1531 aaKnown RBP13.8□□□□□ -0.2
R3HDM2-207ENST00000441731 TDRD9Q8NDG6 1382 aaKnown RBP13.8□□□□□ -0.2
R3HDM2-207ENST00000441731 APLP2Q06481 763 aa13.79□□□□□ -0.2
R3HDM2-207ENST00000441731 CYB5RLQ6IPT4 315 aa13.79□□□□□ -0.2
R3HDM2-207ENST00000441731 HRCP23327 699 aa13.77□□□□□ -0.2
R3HDM2-207ENST00000441731 MYT1LQ9UL68 1186 aa13.77□□□□□ -0.21
R3HDM2-207ENST00000441731 SOGA1O94964 1423 aa13.77□□□□□ -0.21
R3HDM2-207ENST00000441731 MRC2Q9UBG0 1479 aa13.76□□□□□ -0.21
R3HDM2-207ENST00000441731 PELP1Q8IZL8 1130 aaKnown RBP13.73□□□□□ -0.21
R3HDM2-207ENST00000441731 ABCC8Q09428 1581 aa13.71□□□□□ -0.22
R3HDM2-207ENST00000441731 LAMC3Q9Y6N6 1575 aa13.71□□□□□ -0.22
R3HDM2-207ENST00000441731 WRNQ14191 1432 aaPredicted RBP eCLIP13.7□□□□□ -0.22
R3HDM2-207ENST00000441731 CFTRP13569 1480 aa13.68□□□□□ -0.22
R3HDM2-207ENST00000441731 CUX2O14529 1486 aa13.67□□□□□ -0.22
R3HDM2-207ENST00000441731 ARID3CA6NKF2 412 aa13.66□□□□□ -0.22
R3HDM2-207ENST00000441731 TRIM26Q12899 539 aaPredicted RBP13.66□□□□□ -0.22
R3HDM2-207ENST00000441731 P3H3Q8IVL6 736 aa13.65□□□□□ -0.22
R3HDM2-207ENST00000441731 DNAJC5Q9H3Z4 198 aa13.65□□□□□ -0.22
R3HDM2-207ENST00000441731 PPARGC1BQ86YN6 1023 aaKnown RBP13.6□□□□□ -0.23
R3HDM2-207ENST00000441731 CSRNP3Q8WYN3 585 aa13.58□□□□□ -0.24
R3HDM2-207ENST00000441731 AQRO60306 1485 aaKnown RBP eCLIP13.58□□□□□ -0.244e-7■■■■□ 20.6
R3HDM2-207ENST00000441731 PEG3Q9GZU2 1588 aa13.57□□□□□ -0.24
R3HDM2-207ENST00000441731 KIF27Q86VH2 1401 aa13.56□□□□□ -0.24
R3HDM2-207ENST00000441731 IFT140Q96RY7 1462 aa13.55□□□□□ -0.24
R3HDM2-207ENST00000441731 RAD54L2Q9Y4B4 1467 aa13.52□□□□□ -0.24
R3HDM2-207ENST00000441731 KCNH8Q96L42 1107 aa13.49□□□□□ -0.25
R3HDM2-207ENST00000441731 RUSC2Q8N2Y8 1516 aa13.49□□□□□ -0.25
R3HDM2-207ENST00000441731 JPH4Q96JJ6 628 aa13.49□□□□□ -0.25
R3HDM2-207ENST00000441731 TOPBP1Q92547 1522 aa13.48□□□□□ -0.25
R3HDM2-207ENST00000441731 FGD5Q6ZNL6 1462 aa13.48□□□□□ -0.25
R3HDM2-207ENST00000441731 AEBP2Q6ZN18 517 aaPredicted RBP13.45□□□□□ -0.26
R3HDM2-207ENST00000441731 GAPVD1Q14C86 1478 aa13.44□□□□□ -0.26
R3HDM2-207ENST00000441731 CARMIL1Q5VZK9 1371 aa13.44□□□□□ -0.26
R3HDM2-207ENST00000441731 CDK11AQ9UQ88 783 aaPredicted RBP13.43□□□□□ -0.26
R3HDM2-207ENST00000441731 MYT1Q01538 1121 aa13.43□□□□□ -0.26
R3HDM2-207ENST00000441731 URB2Q14146 1524 aaKnown RBP13.41□□□□□ -0.26
R3HDM2-207ENST00000441731 SYNJ1O43426 1573 aa13.41□□□□□ -0.26
R3HDM2-207ENST00000441731 GRIN2BQ13224 1484 aa13.41□□□□□ -0.26
R3HDM2-207ENST00000441731 PLPPR3Q6T4P5 718 aa13.4□□□□□ -0.26
R3HDM2-207ENST00000441731 POLA1P09884 1462 aaPredicted RBP13.4□□□□□ -0.26
R3HDM2-207ENST00000441731 CEP162Q5TB80 1403 aa13.38□□□□□ -0.27
R3HDM2-207ENST00000441731 CARMIL2Q6F5E8 1435 aa13.38□□□□□ -0.27
R3HDM2-207ENST00000441731 ZNF608Q9ULD9 1512 aaPredicted RBP13.36□□□□□ -0.27
R3HDM2-207ENST00000441731 EEA1Q15075 1411 aa13.36□□□□□ -0.27
R3HDM2-207ENST00000441731 DNMBPQ6XZF7 1577 aa13.35□□□□□ -0.27
R3HDM2-207ENST00000441731 ESF1Q9H501 851 aaKnown RBP13.35□□□□□ -0.27
R3HDM2-207ENST00000441731 TNIKQ9UKE5 1360 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms