Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 HMBOX1-201ENST00000287701 3184 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 KLHL1-202ENST00000545028 3966 ntTSL 2 BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 FLJ22447-202ENST00000556569 1312 ntTSL 2 BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 SRSF10-204ENST00000344989 3487 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 LINC00484-205ENST00000423719 3023 ntTSL 2 BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 RN7SKP204-201ENST00000365481 310 ntBASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 CAPN3-208ENST00000397204 1237 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 SNRPE-202ENST00000414487 942 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 CELSR3-AS1-201ENST00000421275 196 ntTSL 2 BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 AL355149.1-201ENST00000438396 882 ntBASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 PFN1P1-201ENST00000442087 423 ntBASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 AL606804.1-202ENST00000446347 481 ntTSL 2 BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 AL356310.1-201ENST00000452024 585 ntTSL 3 BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 TUBB4BP2-201ENST00000454125 798 ntBASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 SOX2-OT-202ENST00000461063 566 ntTSL 3 BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 AC092965.1-201ENST00000469748 490 ntBASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 PTPRE-207ENST00000471218 522 ntTSL 3 BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 RN7SL156P-201ENST00000480334 304 ntBASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 RN7SL573P-201ENST00000485340 276 ntBASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 RPL10AP1-201ENST00000490023 643 ntBASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 HULC-201ENST00000503668 556 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 HGNC:18790-205ENST00000504171 980 ntTSL 2 BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 RFPL4AP7-201ENST00000520120 215 ntBASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 OR1D4-201ENST00000525719 939 ntBASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 FDPSP4-201ENST00000534629 1049 ntBASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 LINC01965-202ENST00000537492 552 ntTSL 4 BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 RTN4IP1-204ENST00000539449 814 ntTSL 2 BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 FLT1-205ENST00000543394 1275 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 NUDT4-205ENST00000548662 765 ntTSL 3 BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 AC005632.1-201ENST00000550637 576 ntBASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 AC137800.1-202ENST00000562098 446 ntBASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 AC093525.3-201ENST00000568040 287 ntTSL 5 BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 AC020779.2-201ENST00000568984 393 ntTSL 3 BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 OR1D5-201ENST00000575751 939 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 AC015908.3-201ENST00000579529 667 ntTSL 3 BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 AC008759.2-201ENST00000585880 600 ntTSL 5 BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 AC087289.3-203ENST00000587556 550 ntAPPRIS P5 TSL 4 BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 C5orf58-206ENST00000593851 509 ntAPPRIS P5 TSL 2 BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 AC119751.8-201ENST00000597032 156 ntBASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 Metazoa_SRP.165-201ENST00000615681 260 ntBASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 FLT1-208ENST00000617835 434 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 AL590491.1-202ENST00000618038 394 ntBASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 AL355987.5-201ENST00000621585 411 ntBASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 C1orf132-204ENST00000637970 1170 ntTSL 5 BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 FAM238C-205ENST00000640641 391 ntBASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 ZNF80-202ENST00000482457 2471 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 ZSCAN26-202ENST00000421553 2835 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 AP003352.1-201ENST00000501016 1989 ntTSL 5 BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 PRR27-201ENST00000344526 3127 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 PRRG1-208ENST00000542554 4600 ntAPPRIS P1 TSL 4 BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 URM1-202ENST00000372850 3045 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 AL354984.1-201ENST00000371169 1854 ntTSL 2 BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 RUBCNL-206ENST00000409879 2997 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 OLFM5P-201ENST00000411807 1478 ntBASIC8.13□□□□□ -1.11
NPIPA3F8WFD2 NCKAP1L-202ENST00000545638 3612 ntTSL 2 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 LRMP-205ENST00000548766 2193 ntAPPRIS P2 TSL 2 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 ALPK1-203ENST00000458497 5410 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 HM13-224ENST00000498035 3932 ntTSL 2 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 TMEM116-213ENST00000550831 1446 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 PLS3-AS1-202ENST00000607680 1763 ntTSL 2 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 AC107398.3-201ENST00000562284 7000 ntBASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 CD46-202ENST00000322918 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 SIRPB1-213ENST00000568365 1701 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 C14orf159-211ENST00000518868 3075 ntAPPRIS ALT1 TSL 2 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 BPNT1-205ENST00000469520 2737 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 KRTAP9-6-201ENST00000391355 1303 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 CLDN2-201ENST00000336803 2959 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 ENPP6-201ENST00000296741 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 FGF13-205ENST00000441825 1625 ntTSL 5 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 ZNF432-201ENST00000221315 2577 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 CLUAP1-212ENST00000576634 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 TTC14-201ENST00000296015 2881 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 RPL36A-HNRNPH2-201ENST00000409170 562 ntAPPRIS P1 TSL 4 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 LINC01399-201ENST00000423311 648 ntTSL 3 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 LINC00892-202ENST00000429841 529 ntTSL 2 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 LINC01508-202ENST00000436671 755 ntTSL 3 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 C5orf67-201ENST00000438651 765 ntAPPRIS P2 TSL 3 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 AC096732.1-201ENST00000439565 477 ntTSL 3 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 AL022318.1-201ENST00000450216 678 ntTSL 3 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 HNRNPCP7-201ENST00000456056 905 ntBASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 IGHV3-36-201ENST00000520848 401 ntBASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 AC078962.3-201ENST00000545821 482 ntTSL 5 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 AL354733.2-205ENST00000590813 621 ntTSL 5 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 ADD3-AS1-203ENST00000625954 472 ntTSL 3 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 NRP1-212ENST00000432372 4137 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 LDB2-201ENST00000304523 2548 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 USP17L8-201ENST00000527080 1593 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
NPIPA3F8WFD2 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms