RNA–Protein interactions for RNA: ENST00000568365.1

SIRPB1-213, Transcript of signal regulatory protein beta 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SIRPB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-213ENST00000568365 NISCHQ9Y2I1 1504 aa19.55■□□□□ 0.72
SIRPB1-213ENST00000568365 CCDC180Q9P1Z9 1646 aa17.33■□□□□ 0.37
SIRPB1-213ENST00000568365 ABCC9O60706 1549 aa16.85■□□□□ 0.29
SIRPB1-213ENST00000568365 DNAJC5BQ9UF47 199 aa16.5■□□□□ 0.23
SIRPB1-213ENST00000568365 ZCCHC6Q5VYS8 1495 aaKnown RBP16.32■□□□□ 0.2
SIRPB1-213ENST00000568365 DCAF8L2P0C7V8 631 aa16.27■□□□□ 0.19
SIRPB1-213ENST00000568365 NACADO15069 1562 aa16.25■□□□□ 0.19
SIRPB1-213ENST00000568365 RB1CC1Q8TDY2 1594 aa16.24■□□□□ 0.19
SIRPB1-213ENST00000568365 MYO15BQ96JP2 1530 aa16.17■□□□□ 0.18
SIRPB1-213ENST00000568365 DCAF1Q9Y4B6 1507 aa16.17■□□□□ 0.18
SIRPB1-213ENST00000568365 DNAJC5Q9H3Z4 198 aa16.04■□□□□ 0.16
SIRPB1-213ENST00000568365 UNC13AQ9UPW8 1703 aa15.93■□□□□ 0.14
SIRPB1-213ENST00000568365 SHROOM4Q9ULL8 1493 aa15.93■□□□□ 0.14
SIRPB1-213ENST00000568365 SCRIBQ14160 1630 aa15.85■□□□□ 0.13
SIRPB1-213ENST00000568365 BICRAQ9NZM4 1560 aa15.78■□□□□ 0.12
SIRPB1-213ENST00000568365 SUPT5HO00267 1087 aaKnown RBP15.77■□□□□ 0.11
SIRPB1-213ENST00000568365 PABPN1Q86U42 306 aaKnown RBP eCLIP15.76■□□□□ 0.11
SIRPB1-213ENST00000568365 HRCP23327 699 aa15.62■□□□□ 0.09
SIRPB1-213ENST00000568365 CHIC1Q5VXU3 224 aa15.54■□□□□ 0.08
SIRPB1-213ENST00000568365 EIF4G1Q04637 1599 aaKnown RBP15.34■□□□□ 0.05
SIRPB1-213ENST00000568365 PCGF6Q9BYE7 350 aa15.31■□□□□ 0.04
SIRPB1-213ENST00000568365 CC2D2AQ9P2K1 1620 aa15.25■□□□□ 0.03
SIRPB1-213ENST00000568365 CECR2Q9BXF3 1484 aa15.24■□□□□ 0.03
SIRPB1-213ENST00000568365 SMARCA4P51532 1647 aa15.16■□□□□ 0.02
SIRPB1-213ENST00000568365 BAZ1AQ9NRL2 1556 aaPredicted RBP15.14■□□□□ 0.01
SIRPB1-213ENST00000568365 MROH2BQ7Z745 1585 aa15.09■□□□□ 0.01
SIRPB1-213ENST00000568365 PPARGC1BQ86YN6 1023 aaKnown RBP15.08■□□□□ 0
SIRPB1-213ENST00000568365 TRIM26Q12899 539 aaPredicted RBP15.07■□□□□ 0
SIRPB1-213ENST00000568365 ATAD2BQ9ULI0 1458 aa15.03■□□□□ -0
SIRPB1-213ENST00000568365 SMARCA2P51531 1590 aa15.01□□□□□ -0.01
SIRPB1-213ENST00000568365 PEG3Q9GZU2 1588 aa14.99□□□□□ -0.01
SIRPB1-213ENST00000568365 NCAPD3P42695 1498 aa14.98□□□□□ -0.01
SIRPB1-213ENST00000568365 LOC105371045A0A1W2PR82 267 aa14.98□□□□□ -0.01
SIRPB1-213ENST00000568365 ZEB1P37275 1124 aaPredicted RBP14.98□□□□□ -0.01
SIRPB1-213ENST00000568365 WIZO95785 1651 aa14.95□□□□□ -0.02
SIRPB1-213ENST00000568365 RSF1Q96T23 1441 aaPredicted RBP14.95□□□□□ -0.02
SIRPB1-213ENST00000568365 HMGXB3Q12766 1538 aa14.94□□□□□ -0.02
SIRPB1-213ENST00000568365 BAZ1BQ9UIG0 1483 aaKnown RBP14.91□□□□□ -0.02
SIRPB1-213ENST00000568365 CUX2O14529 1486 aa14.85□□□□□ -0.03
SIRPB1-213ENST00000568365 PELP1Q8IZL8 1130 aaKnown RBP14.83□□□□□ -0.03
SIRPB1-213ENST00000568365 TRIM41Q8WV44 630 aa14.78□□□□□ -0.04
SIRPB1-213ENST00000568365 TOP2AP11388 1531 aaKnown RBP14.78□□□□□ -0.04
SIRPB1-213ENST00000568365 NESP48681 1621 aa14.63□□□□□ -0.07
SIRPB1-213ENST00000568365 CCDC88BA6NC98 1476 aa14.6□□□□□ -0.07
SIRPB1-213ENST00000568365 LAMC3Q9Y6N6 1575 aa14.58□□□□□ -0.08
SIRPB1-213ENST00000568365 CADPSQ9ULU8 1353 aa14.55□□□□□ -0.08
SIRPB1-213ENST00000568365 FAM9AQ8IZU1 332 aaPredicted RBP14.52□□□□□ -0.08
SIRPB1-213ENST00000568365 SCAF1Q9H7N4 1312 aaKnown RBP14.51□□□□□ -0.09
SIRPB1-213ENST00000568365 CFTRP13569 1480 aa14.5□□□□□ -0.09
SIRPB1-213ENST00000568365 ERCC6Q03468 1493 aa14.5□□□□□ -0.09
SIRPB1-213ENST00000568365 KIF21AQ7Z4S6 1674 aa14.48□□□□□ -0.09
SIRPB1-213ENST00000568365 PDS5BQ9NTI5 1447 aa14.45□□□□□ -0.1
SIRPB1-213ENST00000568365 PRDM2Q13029 1718 aa14.44□□□□□ -0.1
SIRPB1-213ENST00000568365 FANCD2Q9BXW9 1451 aa14.4□□□□□ -0.1
SIRPB1-213ENST00000568365 THOC2Q8NI27 1593 aaKnown RBP14.38□□□□□ -0.11
SIRPB1-213ENST00000568365 CEP164Q9UPV0 1460 aa14.37□□□□□ -0.11
SIRPB1-213ENST00000568365 ACIN1Q9UKV3 1341 aaKnown RBP14.35□□□□□ -0.11
SIRPB1-213ENST00000568365 WRNQ14191 1432 aaPredicted RBP eCLIP14.35□□□□□ -0.11
SIRPB1-213ENST00000568365 CCER1Q8TC90 406 aaPredicted RBP14.35□□□□□ -0.11
SIRPB1-213ENST00000568365 MRC2Q9UBG0 1479 aa14.33□□□□□ -0.12
SIRPB1-213ENST00000568365 EHMT2Q96KQ7 1210 aa14.32□□□□□ -0.12
SIRPB1-213ENST00000568365 CENPBP07199 599 aaPredicted RBP14.31□□□□□ -0.12
SIRPB1-213ENST00000568365 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.29□□□□□ -0.12
SIRPB1-213ENST00000568365 WDR62O43379 1518 aa14.28□□□□□ -0.12
SIRPB1-213ENST00000568365 URB2Q14146 1524 aaKnown RBP14.27□□□□□ -0.12
SIRPB1-213ENST00000568365 MYT1Q01538 1121 aa14.27□□□□□ -0.13
SIRPB1-213ENST00000568365 DIEXFQ68CQ4 756 aaKnown RBP14.24□□□□□ -0.13
SIRPB1-213ENST00000568365 AEBP2Q6ZN18 517 aaPredicted RBP14.24□□□□□ -0.13
SIRPB1-213ENST00000568365 EEA1Q15075 1411 aa14.24□□□□□ -0.13
SIRPB1-213ENST00000568365 NEUROD1Q13562 356 aa14.22□□□□□ -0.13
SIRPB1-213ENST00000568365 CEP162Q5TB80 1403 aa14.21□□□□□ -0.13
SIRPB1-213ENST00000568365 TNIKQ9UKE5 1360 aa14.2□□□□□ -0.14
SIRPB1-213ENST00000568365 TOPBP1Q92547 1522 aa14.19□□□□□ -0.14
SIRPB1-213ENST00000568365 DNMBPQ6XZF7 1577 aa14.19□□□□□ -0.14
SIRPB1-213ENST00000568365 ABCC8Q09428 1581 aa14.19□□□□□ -0.14
SIRPB1-213ENST00000568365 CUX1P39880 1505 aa14.15□□□□□ -0.14
SIRPB1-213ENST00000568365 GTF3C3Q9Y5Q9 886 aa14.14□□□□□ -0.15
SIRPB1-213ENST00000568365 GOLGA3Q08378 1498 aa14.1□□□□□ -0.15
SIRPB1-213ENST00000568365 ZNF316A6NFI3 1004 aaPredicted RBP14.1□□□□□ -0.15
SIRPB1-213ENST00000568365 POLA1P09884 1462 aaPredicted RBP14.08□□□□□ -0.16
SIRPB1-213ENST00000568365 FGD5Q6ZNL6 1462 aa14.08□□□□□ -0.16
SIRPB1-213ENST00000568365 SYNJ1O43426 1573 aa14.07□□□□□ -0.16
SIRPB1-213ENST00000568365 SOGA1O94964 1423 aa14.07□□□□□ -0.16
SIRPB1-213ENST00000568365 BIVM-ERCC5R4GMW8 1640 aa14.06□□□□□ -0.16
SIRPB1-213ENST00000568365 IFT140Q96RY7 1462 aa14.06□□□□□ -0.16
SIRPB1-213ENST00000568365 TOP2BQ02880 1626 aa14.05□□□□□ -0.16
SIRPB1-213ENST00000568365 CSRNP3Q8WYN3 585 aa14.04□□□□□ -0.16
SIRPB1-213ENST00000568365 KIF21BO75037 1637 aa14.04□□□□□ -0.16
SIRPB1-213ENST00000568365 TARBP1Q13395 1621 aaKnown RBP14.04□□□□□ -0.16
SIRPB1-213ENST00000568365 RAD54L2Q9Y4B4 1467 aa14.04□□□□□ -0.16
SIRPB1-213ENST00000568365 ZNF608Q9ULD9 1512 aaPredicted RBP14.02□□□□□ -0.17
SIRPB1-213ENST00000568365 UBTFP17480 764 aaKnown RBP13.98□□□□□ -0.17
SIRPB1-213ENST00000568365 WDR97A6NE52 1622 aa13.98□□□□□ -0.17
SIRPB1-213ENST00000568365 EIF4G3O43432 1585 aaKnown RBP13.97□□□□□ -0.17
SIRPB1-213ENST00000568365 TTBK1Q5TCY1 1321 aaPredicted RBP13.97□□□□□ -0.17
SIRPB1-213ENST00000568365 RUSC2Q8N2Y8 1516 aa13.97□□□□□ -0.17
SIRPB1-213ENST00000568365 AQRO60306 1485 aaKnown RBP eCLIP13.93□□□□□ -0.18
SIRPB1-213ENST00000568365 TDRD9Q8NDG6 1382 aaKnown RBP13.93□□□□□ -0.18
SIRPB1-213ENST00000568365 OSCARQ8IYS5 282 aa13.93□□□□□ -0.18
SIRPB1-213ENST00000568365 ABCA10Q8WWZ4 1543 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms