RNA–Protein interactions for RNA: ENST00000545638.2

NCKAP1L-202, Transcript of NCK associated protein 1 like, humanhuman

TSL 2 BASIC

Gene NCKAP1L, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-202ENST00000545638 NISCHQ9Y2I1 1504 aa18.49■□□□□ 0.55
NCKAP1L-202ENST00000545638 DCAF8L2P0C7V8 631 aa17■□□□□ 0.31
NCKAP1L-202ENST00000545638 SHROOM4Q9ULL8 1493 aa16.17■□□□□ 0.18
NCKAP1L-202ENST00000545638 ABCC9O60706 1549 aa15.97■□□□□ 0.15
NCKAP1L-202ENST00000545638 SUPT5HO00267 1087 aaKnown RBP15.76■□□□□ 0.11
NCKAP1L-202ENST00000545638 CCDC180Q9P1Z9 1646 aa15.7■□□□□ 0.1
NCKAP1L-202ENST00000545638 PABPN1Q86U42 306 aaKnown RBP eCLIP15.41■□□□□ 0.06
NCKAP1L-202ENST00000545638 ZCCHC6Q5VYS8 1495 aaKnown RBP15.37■□□□□ 0.05
NCKAP1L-202ENST00000545638 SCRIBQ14160 1630 aa15.13■□□□□ 0.01
NCKAP1L-202ENST00000545638 RB1CC1Q8TDY2 1594 aa15.03■□□□□ -0
NCKAP1L-202ENST00000545638 NACADO15069 1562 aa14.98□□□□□ -0.01
NCKAP1L-202ENST00000545638 EHMT2Q96KQ7 1210 aa14.86□□□□□ -0.03
NCKAP1L-202ENST00000545638 DCAF1Q9Y4B6 1507 aa14.86□□□□□ -0.03
NCKAP1L-202ENST00000545638 FAM9AQ8IZU1 332 aaPredicted RBP14.73□□□□□ -0.05
NCKAP1L-202ENST00000545638 MYO15BQ96JP2 1530 aa14.65□□□□□ -0.06
NCKAP1L-202ENST00000545638 TRIM41Q8WV44 630 aa14.63□□□□□ -0.07
NCKAP1L-202ENST00000545638 CECR2Q9BXF3 1484 aa14.6□□□□□ -0.07
NCKAP1L-202ENST00000545638 RSF1Q96T23 1441 aaPredicted RBP14.5□□□□□ -0.09
NCKAP1L-202ENST00000545638 CHIC1Q5VXU3 224 aa14.43□□□□□ -0.1
NCKAP1L-202ENST00000545638 RANGAP1P46060 587 aaPredicted RBP14.41□□□□□ -0.1
NCKAP1L-202ENST00000545638 MROH2BQ7Z745 1585 aa14.38□□□□□ -0.11
NCKAP1L-202ENST00000545638 BAZ1AQ9NRL2 1556 aaPredicted RBP14.35□□□□□ -0.11
NCKAP1L-202ENST00000545638 BAZ1BQ9UIG0 1483 aaKnown RBP14.29□□□□□ -0.12
NCKAP1L-202ENST00000545638 UBTFP17480 764 aaKnown RBP14.25□□□□□ -0.13
NCKAP1L-202ENST00000545638 LOC105371045A0A1W2PR82 267 aa14.22□□□□□ -0.13
NCKAP1L-202ENST00000545638 WIZO95785 1651 aa14.21□□□□□ -0.13
NCKAP1L-202ENST00000545638 BICRAQ9NZM4 1560 aa14.2□□□□□ -0.14
NCKAP1L-202ENST00000545638 TTBK1Q5TCY1 1321 aaPredicted RBP14.16□□□□□ -0.14
NCKAP1L-202ENST00000545638 UNC13AQ9UPW8 1703 aa14.15□□□□□ -0.14
NCKAP1L-202ENST00000545638 SMARCA4P51532 1647 aa14.14□□□□□ -0.15
NCKAP1L-202ENST00000545638 ATAD2BQ9ULI0 1458 aa14.13□□□□□ -0.15
NCKAP1L-202ENST00000545638 EIF4G1Q04637 1599 aaKnown RBP14.09□□□□□ -0.15
NCKAP1L-202ENST00000545638 SMARCA2P51531 1590 aa14.09□□□□□ -0.15
NCKAP1L-202ENST00000545638 DNAJC5BQ9UF47 199 aa14.08□□□□□ -0.16
NCKAP1L-202ENST00000545638 ATP1B4Q9UN42 357 aaPredicted RBP14.07□□□□□ -0.16
NCKAP1L-202ENST00000545638 CCDC88BA6NC98 1476 aa14.06□□□□□ -0.16
NCKAP1L-202ENST00000545638 FBLN2P98095 1184 aa14.01□□□□□ -0.17
NCKAP1L-202ENST00000545638 APLP2Q06481 763 aa14.01□□□□□ -0.17
NCKAP1L-202ENST00000545638 PPARGC1BQ86YN6 1023 aaKnown RBP13.98□□□□□ -0.17
NCKAP1L-202ENST00000545638 TOP2AP11388 1531 aaKnown RBP13.97□□□□□ -0.17
NCKAP1L-202ENST00000545638 CC2D2AQ9P2K1 1620 aa13.94□□□□□ -0.18
NCKAP1L-202ENST00000545638 CSRNP3Q8WYN3 585 aa13.91□□□□□ -0.18
NCKAP1L-202ENST00000545638 NCAPD3P42695 1498 aa13.91□□□□□ -0.18
NCKAP1L-202ENST00000545638 ERCC6Q03468 1493 aa13.9□□□□□ -0.18
NCKAP1L-202ENST00000545638 WRNQ14191 1432 aaPredicted RBP eCLIP13.88□□□□□ -0.19
NCKAP1L-202ENST00000545638 CADPSQ9ULU8 1353 aa13.87□□□□□ -0.19
NCKAP1L-202ENST00000545638 ABCC8Q09428 1581 aa13.85□□□□□ -0.19
NCKAP1L-202ENST00000545638 P3H3Q8IVL6 736 aa13.79□□□□□ -0.2
NCKAP1L-202ENST00000545638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.78□□□□□ -0.2
NCKAP1L-202ENST00000545638 HNRNPUL2Q1KMD3 747 aaKnown RBP13.78□□□□□ -0.2
NCKAP1L-202ENST00000545638 PDS5BQ9NTI5 1447 aa13.77□□□□□ -0.2
NCKAP1L-202ENST00000545638 PCGF6Q9BYE7 350 aa13.77□□□□□ -0.21
NCKAP1L-202ENST00000545638 NESP48681 1621 aa13.77□□□□□ -0.21
NCKAP1L-202ENST00000545638 FANCD2Q9BXW9 1451 aa13.7□□□□□ -0.22
NCKAP1L-202ENST00000545638 SOGA1O94964 1423 aa13.7□□□□□ -0.22
NCKAP1L-202ENST00000545638 HMGXB3Q12766 1538 aa13.69□□□□□ -0.22
NCKAP1L-202ENST00000545638 ARID3CA6NKF2 412 aa13.69□□□□□ -0.22
NCKAP1L-202ENST00000545638 CHMP7Q8WUX9 453 aaPredicted RBP13.68□□□□□ -0.22
NCKAP1L-202ENST00000545638 TDRD9Q8NDG6 1382 aaKnown RBP13.67□□□□□ -0.22
NCKAP1L-202ENST00000545638 CEP164Q9UPV0 1460 aa13.65□□□□□ -0.22
NCKAP1L-202ENST00000545638 CUX2O14529 1486 aa13.64□□□□□ -0.23
NCKAP1L-202ENST00000545638 KIF27Q86VH2 1401 aa13.62□□□□□ -0.23
NCKAP1L-202ENST00000545638 CFTRP13569 1480 aa13.61□□□□□ -0.23
NCKAP1L-202ENST00000545638 PEG3Q9GZU2 1588 aa13.6□□□□□ -0.23
NCKAP1L-202ENST00000545638 ITGAEP38570 1179 aa13.59□□□□□ -0.23
NCKAP1L-202ENST00000545638 RUSC2Q8N2Y8 1516 aa13.54□□□□□ -0.24
NCKAP1L-202ENST00000545638 RAD54L2Q9Y4B4 1467 aa13.51□□□□□ -0.25
NCKAP1L-202ENST00000545638 CARMIL1Q5VZK9 1371 aa13.5□□□□□ -0.25
NCKAP1L-202ENST00000545638 EEA1Q15075 1411 aa13.5□□□□□ -0.25
NCKAP1L-202ENST00000545638 FGD5Q6ZNL6 1462 aa13.49□□□□□ -0.25
NCKAP1L-202ENST00000545638 GOLGA3Q08378 1498 aa13.44□□□□□ -0.26
NCKAP1L-202ENST00000545638 SYNJ1O43426 1573 aa13.43□□□□□ -0.26
NCKAP1L-202ENST00000545638 TRIM26Q12899 539 aaPredicted RBP13.43□□□□□ -0.26
NCKAP1L-202ENST00000545638 CLIP1P30622 1438 aa13.42□□□□□ -0.26
NCKAP1L-202ENST00000545638 MYT1LQ9UL68 1186 aa13.42□□□□□ -0.26
NCKAP1L-202ENST00000545638 AQRO60306 1485 aaKnown RBP eCLIP13.41□□□□□ -0.26
NCKAP1L-202ENST00000545638 CUX1P39880 1505 aa13.4□□□□□ -0.26
NCKAP1L-202ENST00000545638 LAMC3Q9Y6N6 1575 aa13.4□□□□□ -0.26
NCKAP1L-202ENST00000545638 FAM50AQ14320 339 aaKnown RBP13.39□□□□□ -0.27
NCKAP1L-202ENST00000545638 CEP162Q5TB80 1403 aa13.39□□□□□ -0.27
NCKAP1L-202ENST00000545638 TOPBP1Q92547 1522 aa13.39□□□□□ -0.27
NCKAP1L-202ENST00000545638 MRC2Q9UBG0 1479 aa13.37□□□□□ -0.27
NCKAP1L-202ENST00000545638 CCER1Q8TC90 406 aaPredicted RBP13.36□□□□□ -0.27
NCKAP1L-202ENST00000545638 POLA1P09884 1462 aaPredicted RBP13.35□□□□□ -0.27
NCKAP1L-202ENST00000545638 TNIKQ9UKE5 1360 aa13.35□□□□□ -0.27
NCKAP1L-202ENST00000545638 RAPGEF2Q9Y4G8 1499 aa13.35□□□□□ -0.27
NCKAP1L-202ENST00000545638 IGF1RP08069 1367 aa13.34□□□□□ -0.27
NCKAP1L-202ENST00000545638 GAPVD1Q14C86 1478 aa13.33□□□□□ -0.27
NCKAP1L-202ENST00000545638 URB2Q14146 1524 aaKnown RBP13.3□□□□□ -0.28
NCKAP1L-202ENST00000545638 ZNF777Q9ULD5 760 aaPredicted RBP13.3□□□□□ -0.28
NCKAP1L-202ENST00000545638 TOP2BQ02880 1626 aa13.29□□□□□ -0.28
NCKAP1L-202ENST00000545638 NPM1P06748 294 aaKnown RBP eCLIP13.28□□□□□ -0.28
NCKAP1L-202ENST00000545638 DNMBPQ6XZF7 1577 aa13.27□□□□□ -0.29
NCKAP1L-202ENST00000545638 CDK11AQ9UQ88 783 aaPredicted RBP13.26□□□□□ -0.29
NCKAP1L-202ENST00000545638 KCNH8Q96L42 1107 aa13.26□□□□□ -0.29
NCKAP1L-202ENST00000545638 JPH4Q96JJ6 628 aa13.25□□□□□ -0.29
NCKAP1L-202ENST00000545638 MTUS2Q5JR59 1369 aa13.21□□□□□ -0.3
NCKAP1L-202ENST00000545638 ZNF608Q9ULD9 1512 aaPredicted RBP13.2□□□□□ -0.3
NCKAP1L-202ENST00000545638 IFT140Q96RY7 1462 aa13.2□□□□□ -0.3
NCKAP1L-202ENST00000545638 KIF21AQ7Z4S6 1674 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms