RNA–Protein interactions for RNA: ENST00000409879.6

RUBCNL-206, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUBCNL, Length 2,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCNL-206ENST00000409879 NISCHQ9Y2I1 1504 aa18.36■□□□□ 0.53
RUBCNL-206ENST00000409879 CHIC1Q5VXU3 224 aa18.09■□□□□ 0.49
RUBCNL-206ENST00000409879 AEBP2Q6ZN18 517 aaPredicted RBP17.67■□□□□ 0.42
RUBCNL-206ENST00000409879 PHF23Q9BUL5 403 aaPredicted RBP16.24■□□□□ 0.19
RUBCNL-206ENST00000409879 SLC24A1O60721 1099 aa16.05■□□□□ 0.16
RUBCNL-206ENST00000409879 SHROOM4Q9ULL8 1493 aa16.02■□□□□ 0.15
RUBCNL-206ENST00000409879 SUPT5HO00267 1087 aaKnown RBP15.93■□□□□ 0.14
RUBCNL-206ENST00000409879 HRCP23327 699 aa15.85■□□□□ 0.13
RUBCNL-206ENST00000409879 MYO15BQ96JP2 1530 aa15.62■□□□□ 0.09
RUBCNL-206ENST00000409879 CCDC180Q9P1Z9 1646 aa15.62■□□□□ 0.09
RUBCNL-206ENST00000409879 PCGF6Q9BYE7 350 aa15.6■□□□□ 0.09
RUBCNL-206ENST00000409879 ZCCHC6Q5VYS8 1495 aaKnown RBP15.57■□□□□ 0.08
RUBCNL-206ENST00000409879 PPARGC1BQ86YN6 1023 aaKnown RBP15.45■□□□□ 0.06
RUBCNL-206ENST00000409879 DCAF8L2P0C7V8 631 aa15.42■□□□□ 0.06
RUBCNL-206ENST00000409879 DCAF1Q9Y4B6 1507 aa15.34■□□□□ 0.05
RUBCNL-206ENST00000409879 LOC105371045A0A1W2PR82 267 aa15.22■□□□□ 0.03
RUBCNL-206ENST00000409879 EHMT2Q96KQ7 1210 aa15.21■□□□□ 0.03
RUBCNL-206ENST00000409879 TRIM26Q12899 539 aaPredicted RBP15.19■□□□□ 0.02
RUBCNL-206ENST00000409879 PLPPR3Q6T4P5 718 aa15.12■□□□□ 0.01
RUBCNL-206ENST00000409879 PELP1Q8IZL8 1130 aaKnown RBP15.07■□□□□ 0
RUBCNL-206ENST00000409879 ZEB1P37275 1124 aaPredicted RBP15.06■□□□□ 0
RUBCNL-206ENST00000409879 SCAF1Q9H7N4 1312 aaKnown RBP14.85□□□□□ -0.03
RUBCNL-206ENST00000409879 TRIM41Q8WV44 630 aa14.8□□□□□ -0.04
RUBCNL-206ENST00000409879 ABCC9O60706 1549 aa14.75□□□□□ -0.05
RUBCNL-206ENST00000409879 SCRIBQ14160 1630 aa14.73□□□□□ -0.05
RUBCNL-206ENST00000409879 FAM9AQ8IZU1 332 aaPredicted RBP14.71□□□□□ -0.05
RUBCNL-206ENST00000409879 KCNA4P22459 653 aa14.71□□□□□ -0.05
RUBCNL-206ENST00000409879 RSF1Q96T23 1441 aaPredicted RBP14.7□□□□□ -0.06
RUBCNL-206ENST00000409879 ACIN1Q9UKV3 1341 aaKnown RBP14.59□□□□□ -0.07
RUBCNL-206ENST00000409879 RB1CC1Q8TDY2 1594 aa14.56□□□□□ -0.08
RUBCNL-206ENST00000409879 NEUROD1Q13562 356 aa14.52□□□□□ -0.08
RUBCNL-206ENST00000409879 DAXXQ9UER7 740 aaPredicted RBP14.52□□□□□ -0.08
RUBCNL-206ENST00000409879 CCER1Q8TC90 406 aaPredicted RBP14.52□□□□□ -0.09
RUBCNL-206ENST00000409879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.51□□□□□ -0.09
RUBCNL-206ENST00000409879 ADRA2BP18089 450 aa14.5□□□□□ -0.09
RUBCNL-206ENST00000409879 NACADO15069 1562 aa14.49□□□□□ -0.09
RUBCNL-206ENST00000409879 SENP3Q9H4L4 574 aaPredicted RBP14.49□□□□□ -0.09
RUBCNL-206ENST00000409879 RTN4Q9NQC3 1192 aaKnown RBP14.47□□□□□ -0.09
RUBCNL-206ENST00000409879 CENPBP07199 599 aaPredicted RBP14.47□□□□□ -0.09
RUBCNL-206ENST00000409879 MYT1Q01538 1121 aa14.45□□□□□ -0.1
RUBCNL-206ENST00000409879 DIEXFQ68CQ4 756 aaKnown RBP14.44□□□□□ -0.1
RUBCNL-206ENST00000409879 GTF3C3Q9Y5Q9 886 aa14.43□□□□□ -0.1
RUBCNL-206ENST00000409879 CECR2Q9BXF3 1484 aa14.39□□□□□ -0.11
RUBCNL-206ENST00000409879 CSRNP3Q8WYN3 585 aa14.38□□□□□ -0.11
RUBCNL-206ENST00000409879 MROH2BQ7Z745 1585 aa14.3□□□□□ -0.12
RUBCNL-206ENST00000409879 PRKCSHP14314 528 aaPredicted RBP14.25□□□□□ -0.13
RUBCNL-206ENST00000409879 WRNQ14191 1432 aaPredicted RBP eCLIP14.25□□□□□ -0.13
RUBCNL-206ENST00000409879 ZNF316A6NFI3 1004 aaPredicted RBP14.23□□□□□ -0.13
RUBCNL-206ENST00000409879 TTBK1Q5TCY1 1321 aaPredicted RBP14.22□□□□□ -0.13
RUBCNL-206ENST00000409879 WIZO95785 1651 aa14.22□□□□□ -0.13
RUBCNL-206ENST00000409879 CEP162Q5TB80 1403 aa14.17□□□□□ -0.14
RUBCNL-206ENST00000409879 NCBP3Q53F19 620 aaKnown RBP14.15□□□□□ -0.14
RUBCNL-206ENST00000409879 EIF4G1Q04637 1599 aaKnown RBP14.14□□□□□ -0.15
RUBCNL-206ENST00000409879 BAZ1AQ9NRL2 1556 aaPredicted RBP14.14□□□□□ -0.15
RUBCNL-206ENST00000409879 YTHDC1Q96MU7 727 aaKnown RBP14.13□□□□□ -0.15
RUBCNL-206ENST00000409879 TNIKQ9UKE5 1360 aa14.12□□□□□ -0.15
RUBCNL-206ENST00000409879 UNC13AQ9UPW8 1703 aa14.1□□□□□ -0.15
RUBCNL-206ENST00000409879 CCDC88BA6NC98 1476 aa14.1□□□□□ -0.15
RUBCNL-206ENST00000409879 PABPN1Q86U42 306 aaKnown RBP eCLIP14.07□□□□□ -0.16
RUBCNL-206ENST00000409879 MIER1Q8N108 512 aa14.07□□□□□ -0.16
RUBCNL-206ENST00000409879 PPP6R1Q9UPN7 881 aa14.06□□□□□ -0.16
RUBCNL-206ENST00000409879 ABCC8Q09428 1581 aa14.06□□□□□ -0.16
RUBCNL-206ENST00000409879 UBTFP17480 764 aaKnown RBP14.06□□□□□ -0.16
RUBCNL-206ENST00000409879 SLC4A1APQ9BWU0 796 aaKnown RBP14.05□□□□□ -0.16
RUBCNL-206ENST00000409879 SOGA1O94964 1423 aa14.05□□□□□ -0.16
RUBCNL-206ENST00000409879 EEA1Q15075 1411 aa14.03□□□□□ -0.16
RUBCNL-206ENST00000409879 SMARCA4P51532 1647 aa14.02□□□□□ -0.17
RUBCNL-206ENST00000409879 APLP2Q06481 763 aa14□□□□□ -0.17
RUBCNL-206ENST00000409879 TOP2AP11388 1531 aaKnown RBP13.99□□□□□ -0.17
RUBCNL-206ENST00000409879 HNRNPUL2Q1KMD3 747 aaKnown RBP13.98□□□□□ -0.17
RUBCNL-206ENST00000409879 GOLGA3Q08378 1498 aa13.95□□□□□ -0.18
RUBCNL-206ENST00000409879 RUSC2Q8N2Y8 1516 aa13.94□□□□□ -0.18
RUBCNL-206ENST00000409879 BICRAQ9NZM4 1560 aa13.93□□□□□ -0.18
RUBCNL-206ENST00000409879 SMARCA2P51531 1590 aa13.92□□□□□ -0.18
RUBCNL-206ENST00000409879 ERICH6Q7L0X2 663 aa13.88□□□□□ -0.19
RUBCNL-206ENST00000409879 CLSPNQ9HAW4 1339 aa13.87□□□□□ -0.19
RUBCNL-206ENST00000409879 CLIP1P30622 1438 aa13.83□□□□□ -0.2
RUBCNL-206ENST00000409879 CEP164Q9UPV0 1460 aa13.83□□□□□ -0.2
RUBCNL-206ENST00000409879 VPS8Q8N3P4 1428 aa13.81□□□□□ -0.2
RUBCNL-206ENST00000409879 SUPT16HQ9Y5B9 1047 aaKnown RBP13.8□□□□□ -0.2
RUBCNL-206ENST00000409879 AMER1Q5JTC6 1135 aaPredicted RBP13.77□□□□□ -0.21
RUBCNL-206ENST00000409879 KIF21BO75037 1637 aa13.76□□□□□ -0.21
RUBCNL-206ENST00000409879 TIMELESSQ9UNS1 1208 aa13.75□□□□□ -0.21
RUBCNL-206ENST00000409879 BAZ1BQ9UIG0 1483 aaKnown RBP13.72□□□□□ -0.21
RUBCNL-206ENST00000409879 DHX57Q6P158 1386 aaKnown RBP13.71□□□□□ -0.21
RUBCNL-206ENST00000409879 PEG3Q9GZU2 1588 aa13.7□□□□□ -0.22
RUBCNL-206ENST00000409879 ATAD2BQ9ULI0 1458 aa13.7□□□□□ -0.22
RUBCNL-206ENST00000409879 RANGAP1P46060 587 aaPredicted RBP13.68□□□□□ -0.22
RUBCNL-206ENST00000409879 TSHZ2Q9NRE2 1034 aa13.68□□□□□ -0.22
RUBCNL-206ENST00000409879 SYNJ1O43426 1573 aa13.67□□□□□ -0.22
RUBCNL-206ENST00000409879 RAPGEF2Q9Y4G8 1499 aa13.67□□□□□ -0.22
RUBCNL-206ENST00000409879 ANP32EQ9BTT0 268 aa13.64□□□□□ -0.23
RUBCNL-206ENST00000409879 ZBTB22O15209 634 aa13.63□□□□□ -0.23
RUBCNL-206ENST00000409879 PPP4R3CPQ6ZMV5 832 aa13.57□□□□□ -0.24
RUBCNL-206ENST00000409879 KANK4Q5T7N3 995 aaPredicted RBP13.56□□□□□ -0.24
RUBCNL-206ENST00000409879 TULP1O00294 542 aaPredicted RBP13.55□□□□□ -0.24
RUBCNL-206ENST00000409879 ARXQ96QS3 562 aa13.55□□□□□ -0.24
RUBCNL-206ENST00000409879 FOXD1Q16676 465 aa13.54□□□□□ -0.24
RUBCNL-206ENST00000409879 RRBP1Q9P2E9 1410 aaKnown RBP13.54□□□□□ -0.24
RUBCNL-206ENST00000409879 ARAP1Q96P48 1450 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms