Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RPP21-223ENST00000436442 522 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SLC1A1P43005 SNRPG-204ENST00000438261 515 ntTSL 2 BASIC9.23□□□□□ -0.93
SLC1A1P43005 AC010967.3-201ENST00000438648 213 ntBASIC9.23□□□□□ -0.93
SLC1A1P43005 RN7SL250P-201ENST00000475154 258 ntBASIC9.23□□□□□ -0.93
SLC1A1P43005 LINC02082-201ENST00000484765 710 ntTSL 2 BASIC9.23□□□□□ -0.93
SLC1A1P43005 HNRNPA1P20-201ENST00000484852 955 ntBASIC9.23□□□□□ -0.93
SLC1A1P43005 LINC02006-203ENST00000493214 812 ntTSL 2 BASIC9.23□□□□□ -0.93
SLC1A1P43005 AC093152.1-201ENST00000495684 564 ntTSL 5 BASIC9.23□□□□□ -0.93
SLC1A1P43005 AL133371.3-201ENST00000556197 549 ntTSL 4 BASIC9.23□□□□□ -0.93
SLC1A1P43005 AC060814.3-201ENST00000557717 460 ntBASIC9.23□□□□□ -0.93
SLC1A1P43005 AC092718.2-203ENST00000561808 789 ntTSL 3 BASIC9.23□□□□□ -0.93
SLC1A1P43005 RN7SL716P-201ENST00000580539 268 ntBASIC9.23□□□□□ -0.93
SLC1A1P43005 RN7SL575P-201ENST00000620774 299 ntBASIC9.23□□□□□ -0.93
SLC1A1P43005 AL157371.2-201ENST00000637813 480 ntTSL 4 BASIC9.23□□□□□ -0.93
SLC1A1P43005 AC105052.3-201ENST00000639209 1130 ntTSL 5 BASIC9.23□□□□□ -0.93
SLC1A1P43005 OR7A17-203ENST00000642123 3565 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
SLC1A1P43005 PCAT18-201ENST00000579458 2598 ntTSL 2 BASIC9.23□□□□□ -0.93
SLC1A1P43005 BRDT-203ENST00000370389 3696 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SLC1A1P43005 HSPA8P6-201ENST00000451965 1552 ntBASIC9.23□□□□□ -0.93
SLC1A1P43005 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SLC1A1P43005 AC005863.1-201ENST00000379640 2998 ntTSL 2 BASIC9.23□□□□□ -0.93
SLC1A1P43005 AC011453.1-201ENST00000597619 2239 ntBASIC9.23□□□□□ -0.93
SLC1A1P43005 SIDT2-219ENST00000620360 3924 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SLC1A1P43005 ZMYND8-219ENST00000611941 5090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SLC1A1P43005 LINC01291-201ENST00000377469 3662 ntTSL 2 BASIC9.23□□□□□ -0.93
SLC1A1P43005 MICAL2-202ENST00000342902 3711 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
SLC1A1P43005 PARP9-201ENST00000360356 3198 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
SLC1A1P43005 STAMBP-203ENST00000394073 6386 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SLC1A1P43005 PARP11-204ENST00000447133 4377 ntTSL 2 BASIC9.22□□□□□ -0.93
SLC1A1P43005 AP001528.3-201ENST00000624364 3249 ntBASIC9.22□□□□□ -0.93
SLC1A1P43005 SUB1-201ENST00000265073 3507 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SLC1A1P43005 CLDN8-201ENST00000399899 2068 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
SLC1A1P43005 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC9.22□□□□□ -0.93
SLC1A1P43005 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SLC1A1P43005 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
SLC1A1P43005 OR9Q1-202ENST00000612174 2134 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
SLC1A1P43005 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SLC1A1P43005 C4orf46-202ENST00000508457 3358 ntTSL 5 BASIC9.22□□□□□ -0.93
SLC1A1P43005 CRTAM-201ENST00000227348 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SLC1A1P43005 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
SLC1A1P43005 XRCC5-202ENST00000392133 3761 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
SLC1A1P43005 SAMD8-201ENST00000372687 6935 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SLC1A1P43005 AL137845.1-201ENST00000340681 1110 ntBASIC9.22□□□□□ -0.93
SLC1A1P43005 TRGVA-201ENST00000413819 285 ntBASIC9.22□□□□□ -0.93
SLC1A1P43005 TPM3P4-201ENST00000425942 755 ntBASIC9.22□□□□□ -0.93
SLC1A1P43005 AL133325.2-201ENST00000431034 449 ntTSL 2 BASIC9.22□□□□□ -0.93
SLC1A1P43005 AC022398.1-201ENST00000441001 510 ntTSL 5 BASIC9.22□□□□□ -0.93
SLC1A1P43005 LINC00578-204ENST00000446548 519 ntTSL 4 BASIC9.22□□□□□ -0.93
SLC1A1P43005 AL109933.1-201ENST00000448126 292 ntTSL 5 BASIC9.22□□□□□ -0.93
SLC1A1P43005 AC233724.8-201ENST00000504574 234 ntBASIC9.22□□□□□ -0.93
SLC1A1P43005 RAB5CP2-201ENST00000505368 637 ntBASIC9.22□□□□□ -0.93
SLC1A1P43005 AC233724.3-201ENST00000512613 128 ntBASIC9.22□□□□□ -0.93
SLC1A1P43005 LDHAL6DP-201ENST00000513668 693 ntBASIC9.22□□□□□ -0.93
SLC1A1P43005 AC098827.1-201ENST00000514630 667 ntBASIC9.22□□□□□ -0.93
SLC1A1P43005 AC124290.2-201ENST00000519431 286 ntBASIC9.22□□□□□ -0.93
SLC1A1P43005 KCTD21-AS1-205ENST00000530261 910 ntTSL 4 BASIC9.22□□□□□ -0.93
SLC1A1P43005 PRR13P2-201ENST00000533804 406 ntBASIC9.22□□□□□ -0.93
SLC1A1P43005 AP000866.3-201ENST00000534607 433 ntBASIC9.22□□□□□ -0.93
SLC1A1P43005 AC128707.1-202ENST00000548963 693 ntTSL 5 BASIC9.22□□□□□ -0.93
SLC1A1P43005 AC083805.2-201ENST00000549683 610 ntTSL 2 BASIC9.22□□□□□ -0.93
SLC1A1P43005 AL022318.2-201ENST00000558766 258 ntBASIC9.22□□□□□ -0.93
SLC1A1P43005 AC037198.1-201ENST00000560769 281 ntTSL 3 BASIC9.22□□□□□ -0.93
SLC1A1P43005 AC027688.1-201ENST00000568471 584 ntTSL 4 BASIC9.22□□□□□ -0.93
SLC1A1P43005 AC107294.2-201ENST00000610001 701 ntTSL 3 BASIC9.22□□□□□ -0.93
SLC1A1P43005 Metazoa_SRP.110-201ENST00000611670 282 ntBASIC9.22□□□□□ -0.93
SLC1A1P43005 AC009237.16-201ENST00000612987 506 ntBASIC9.22□□□□□ -0.93
SLC1A1P43005 RN7SL796P-201ENST00000613991 291 ntBASIC9.22□□□□□ -0.93
SLC1A1P43005 AL353649.1-201ENST00000625060 619 ntBASIC9.22□□□□□ -0.93
SLC1A1P43005 TRIM6-203ENST00000380107 2590 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SLC1A1P43005 HSP90AB1-204ENST00000620073 2644 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
SLC1A1P43005 MARK3-203ENST00000335102 2331 ntTSL 5 BASIC9.22□□□□□ -0.93
SLC1A1P43005 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
SLC1A1P43005 APOL1-201ENST00000319136 3000 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
SLC1A1P43005 FBXO38-203ENST00000394370 4132 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SLC1A1P43005 AL450992.1-201ENST00000432386 4109 ntTSL 2 BASIC9.22□□□□□ -0.93
SLC1A1P43005 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
SLC1A1P43005 AL445250.1-204ENST00000641775 1723 ntBASIC9.22□□□□□ -0.93
SLC1A1P43005 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC9.22□□□□□ -0.93
SLC1A1P43005 ADD3-203ENST00000360162 3114 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SLC1A1P43005 HPRT1-201ENST00000298556 1407 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SLC1A1P43005 PDZK1-202ENST00000417171 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
SLC1A1P43005 PAX6-259ENST00000639916 2622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.93
SLC1A1P43005 AL731563.3-201ENST00000608005 3005 ntTSL 2 BASIC9.21□□□□□ -0.93
SLC1A1P43005 KIAA0040-201ENST00000423313 4564 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
SLC1A1P43005 RNASE9-207ENST00000555230 2668 ntAPPRIS P3 TSL 2 BASIC9.21□□□□□ -0.93
SLC1A1P43005 CPA4-202ENST00000445470 2718 ntTSL 2 BASIC9.21□□□□□ -0.93
SLC1A1P43005 AL135903.1-201ENST00000402742 1590 ntBASIC9.21□□□□□ -0.93
SLC1A1P43005 PPARGC1A-206ENST00000507380 2385 ntTSL 2 BASIC9.21□□□□□ -0.93
SLC1A1P43005 MCM8-202ENST00000378883 3574 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
SLC1A1P43005 SMIM12-204ENST00000446026 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
SLC1A1P43005 HNRNPDL-204ENST00000507721 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
SLC1A1P43005 AL391095.1-201ENST00000422519 2004 ntTSL 2 BASIC9.21□□□□□ -0.93
SLC1A1P43005 AP003086.1-201ENST00000513207 1642 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
SLC1A1P43005 SH2D4A-202ENST00000518040 1697 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.93
SLC1A1P43005 HNRNPC-222ENST00000555914 1658 ntAPPRIS ALT1 TSL 5 BASIC9.21□□□□□ -0.93
SLC1A1P43005 CFAP57-201ENST00000372492 4244 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
SLC1A1P43005 VPREB1-201ENST00000302273 626 ntAPPRIS ALT2 TSL 3 BASIC9.21□□□□□ -0.94
SLC1A1P43005 OR10J5-201ENST00000334857 930 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
SLC1A1P43005 PPM1N-202ENST00000396736 527 ntTSL 5 BASIC9.21□□□□□ -0.94
SLC1A1P43005 MED28P1-201ENST00000399158 571 ntBASIC9.21□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms