RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 NISCHQ9Y2I1 1504 aa17.51■□□□□ 0.39
TRIM6-203ENST00000380107 SHROOM4Q9ULL8 1493 aa15.4■□□□□ 0.06
TRIM6-203ENST00000380107 SUPT5HO00267 1087 aaKnown RBP15.16■□□□□ 0.02
TRIM6-203ENST00000380107 DCAF8L2P0C7V8 631 aa14.84□□□□□ -0.03
TRIM6-203ENST00000380107 ZCCHC6Q5VYS8 1495 aaKnown RBP14.82□□□□□ -0.04
TRIM6-203ENST00000380107 MYO15BQ96JP2 1530 aa14.73□□□□□ -0.05
TRIM6-203ENST00000380107 CHIC1Q5VXU3 224 aa14.68□□□□□ -0.06
TRIM6-203ENST00000380107 CCDC180Q9P1Z9 1646 aa14.67□□□□□ -0.06
TRIM6-203ENST00000380107 AEBP2Q6ZN18 517 aaPredicted RBP14.63□□□□□ -0.07
TRIM6-203ENST00000380107 PCGF6Q9BYE7 350 aa14.52□□□□□ -0.08
TRIM6-203ENST00000380107 HRCP23327 699 aa14.5□□□□□ -0.09
TRIM6-203ENST00000380107 LOC105371045A0A1W2PR82 267 aa14.4□□□□□ -0.1
TRIM6-203ENST00000380107 PPARGC1BQ86YN6 1023 aaKnown RBP14.39□□□□□ -0.11
TRIM6-203ENST00000380107 DCAF1Q9Y4B6 1507 aa14.19□□□□□ -0.14
TRIM6-203ENST00000380107 EHMT2Q96KQ7 1210 aa14.08□□□□□ -0.16
TRIM6-203ENST00000380107 FAM9AQ8IZU1 332 aaPredicted RBP14.06□□□□□ -0.16
TRIM6-203ENST00000380107 TRIM26Q12899 539 aaPredicted RBP14.04□□□□□ -0.16
TRIM6-203ENST00000380107 SCRIBQ14160 1630 aa14.04□□□□□ -0.16
TRIM6-203ENST00000380107 ABCC9O60706 1549 aa14.02□□□□□ -0.17
TRIM6-203ENST00000380107 RSF1Q96T23 1441 aaPredicted RBP13.99□□□□□ -0.17
TRIM6-203ENST00000380107 TRIM41Q8WV44 630 aa13.98□□□□□ -0.17
TRIM6-203ENST00000380107 RB1CC1Q8TDY2 1594 aa13.92□□□□□ -0.18
TRIM6-203ENST00000380107 CECR2Q9BXF3 1484 aa13.79□□□□□ -0.2
TRIM6-203ENST00000380107 MROH2BQ7Z745 1585 aa13.71□□□□□ -0.21
TRIM6-203ENST00000380107 ZEB1P37275 1124 aaPredicted RBP13.7□□□□□ -0.22
TRIM6-203ENST00000380107 WIZO95785 1651 aa13.67□□□□□ -0.22
TRIM6-203ENST00000380107 TTBK1Q5TCY1 1321 aaPredicted RBP13.64□□□□□ -0.23
TRIM6-203ENST00000380107 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.62□□□□□ -0.23
TRIM6-203ENST00000380107 SCAF1Q9H7N4 1312 aaKnown RBP13.56□□□□□ -0.24
TRIM6-203ENST00000380107 NACADO15069 1562 aa13.56□□□□□ -0.24
TRIM6-203ENST00000380107 CCER1Q8TC90 406 aaPredicted RBP13.52□□□□□ -0.24
TRIM6-203ENST00000380107 ABCC8Q09428 1581 aa13.48□□□□□ -0.25
TRIM6-203ENST00000380107 BAZ1AQ9NRL2 1556 aaPredicted RBP13.46□□□□□ -0.25
TRIM6-203ENST00000380107 CCDC88BA6NC98 1476 aa13.44□□□□□ -0.26
TRIM6-203ENST00000380107 EIF4G1Q04637 1599 aaKnown RBP13.42□□□□□ -0.26
TRIM6-203ENST00000380107 SOGA1O94964 1423 aa13.38□□□□□ -0.27
TRIM6-203ENST00000380107 NEUROD1Q13562 356 aa13.35□□□□□ -0.27
TRIM6-203ENST00000380107 CEP162Q5TB80 1403 aa13.34□□□□□ -0.27
TRIM6-203ENST00000380107 RUSC2Q8N2Y8 1516 aa13.34□□□□□ -0.27
TRIM6-203ENST00000380107 UBTFP17480 764 aaKnown RBP13.34□□□□□ -0.27
TRIM6-203ENST00000380107 TOP2AP11388 1531 aaKnown RBP13.33□□□□□ -0.28
TRIM6-203ENST00000380107 DIEXFQ68CQ4 756 aaKnown RBP13.32□□□□□ -0.28
TRIM6-203ENST00000380107 SMARCA2P51531 1590 aa13.31□□□□□ -0.28
TRIM6-203ENST00000380107 SMARCA4P51532 1647 aa13.31□□□□□ -0.28
TRIM6-203ENST00000380107 ACIN1Q9UKV3 1341 aaKnown RBP13.3□□□□□ -0.28
TRIM6-203ENST00000380107 PABPN1Q86U42 306 aaKnown RBP eCLIP13.29□□□□□ -0.28
TRIM6-203ENST00000380107 CSRNP3Q8WYN3 585 aa13.27□□□□□ -0.29
TRIM6-203ENST00000380107 UNC13AQ9UPW8 1703 aa13.26□□□□□ -0.29
TRIM6-203ENST00000380107 WRNQ14191 1432 aaPredicted RBP eCLIP13.25□□□□□ -0.29
TRIM6-203ENST00000380107 TNIKQ9UKE5 1360 aa13.23□□□□□ -0.29
TRIM6-203ENST00000380107 GTF3C3Q9Y5Q9 886 aa13.23□□□□□ -0.29
TRIM6-203ENST00000380107 RANGAP1P46060 587 aaPredicted RBP13.23□□□□□ -0.29
TRIM6-203ENST00000380107 PELP1Q8IZL8 1130 aaKnown RBP13.22□□□□□ -0.29
TRIM6-203ENST00000380107 HNRNPUL2Q1KMD3 747 aaKnown RBP13.21□□□□□ -0.29
TRIM6-203ENST00000380107 YTHDC1Q96MU7 727 aaKnown RBP13.18□□□□□ -0.3
TRIM6-203ENST00000380107 CENPBP07199 599 aaPredicted RBP13.14□□□□□ -0.31
TRIM6-203ENST00000380107 GOLGA3Q08378 1498 aa13.13□□□□□ -0.31
TRIM6-203ENST00000380107 ZNF316A6NFI3 1004 aaPredicted RBP13.13□□□□□ -0.31
TRIM6-203ENST00000380107 EEA1Q15075 1411 aa13.1□□□□□ -0.31
TRIM6-203ENST00000380107 SYNJ1O43426 1573 aa13.08□□□□□ -0.32
TRIM6-203ENST00000380107 MIER1Q8N108 512 aa13.06□□□□□ -0.32
TRIM6-203ENST00000380107 CLIP1P30622 1438 aa13.05□□□□□ -0.32
TRIM6-203ENST00000380107 BICRAQ9NZM4 1560 aa13.05□□□□□ -0.32
TRIM6-203ENST00000380107 CEP164Q9UPV0 1460 aa13.02□□□□□ -0.33
TRIM6-203ENST00000380107 RAPGEF2Q9Y4G8 1499 aa13.02□□□□□ -0.33
TRIM6-203ENST00000380107 APLP2Q06481 763 aa13.01□□□□□ -0.33
TRIM6-203ENST00000380107 VPS8Q8N3P4 1428 aa12.97□□□□□ -0.33
TRIM6-203ENST00000380107 KIF21BO75037 1637 aa12.96□□□□□ -0.33
TRIM6-203ENST00000380107 ATAD2BQ9ULI0 1458 aa12.94□□□□□ -0.34
TRIM6-203ENST00000380107 BAZ1BQ9UIG0 1483 aaKnown RBP12.93□□□□□ -0.34
TRIM6-203ENST00000380107 PEG3Q9GZU2 1588 aa12.93□□□□□ -0.34
TRIM6-203ENST00000380107 KANK4Q5T7N3 995 aaPredicted RBP12.89□□□□□ -0.35
TRIM6-203ENST00000380107 SENP3Q9H4L4 574 aaPredicted RBP12.89□□□□□ -0.35
TRIM6-203ENST00000380107 ITGAEP38570 1179 aa12.85□□□□□ -0.35
TRIM6-203ENST00000380107 TOP2BQ02880 1626 aa12.82□□□□□ -0.36
TRIM6-203ENST00000380107 DHX57Q6P158 1386 aaKnown RBP12.81□□□□□ -0.36
TRIM6-203ENST00000380107 ARAP1Q96P48 1450 aa12.81□□□□□ -0.36
TRIM6-203ENST00000380107 PRXQ9BXM0 1461 aa12.75□□□□□ -0.37
TRIM6-203ENST00000380107 BIVM-ERCC5R4GMW8 1640 aa12.74□□□□□ -0.37
TRIM6-203ENST00000380107 CUX1P39880 1505 aa12.73□□□□□ -0.37
TRIM6-203ENST00000380107 ERICH3Q5RHP9 1530 aa12.7□□□□□ -0.38
TRIM6-203ENST00000380107 KCNH8Q96L42 1107 aa12.7□□□□□ -0.38
TRIM6-203ENST00000380107 KIF27Q86VH2 1401 aa12.68□□□□□ -0.38
TRIM6-203ENST00000380107 ARHGAP35Q9NRY4 1499 aa12.67□□□□□ -0.38
TRIM6-203ENST00000380107 CLSPNQ9HAW4 1339 aa12.67□□□□□ -0.38
TRIM6-203ENST00000380107 CCNB3Q8WWL7 1395 aa12.67□□□□□ -0.38
TRIM6-203ENST00000380107 RRBP1Q9P2E9 1410 aaKnown RBP12.66□□□□□ -0.38
TRIM6-203ENST00000380107 SUPT16HQ9Y5B9 1047 aaKnown RBP12.66□□□□□ -0.38
TRIM6-203ENST00000380107 P3H3Q8IVL6 736 aa12.64□□□□□ -0.39
TRIM6-203ENST00000380107 DNAJC5BQ9UF47 199 aa12.64□□□□□ -0.39
TRIM6-203ENST00000380107 ATP1B4Q9UN42 357 aaPredicted RBP12.64□□□□□ -0.39
TRIM6-203ENST00000380107 RAB3GAP2Q9H2M9 1393 aa12.63□□□□□ -0.39
TRIM6-203ENST00000380107 SIN3AQ96ST3 1273 aa12.61□□□□□ -0.39
TRIM6-203ENST00000380107 FAM50AQ14320 339 aaKnown RBP12.61□□□□□ -0.39
TRIM6-203ENST00000380107 HIRIP3Q9BW71 556 aaPredicted RBP12.61□□□□□ -0.39
TRIM6-203ENST00000380107 CUX2O14529 1486 aa12.59□□□□□ -0.39
TRIM6-203ENST00000380107 NCAPD3P42695 1498 aa12.59□□□□□ -0.39
TRIM6-203ENST00000380107 CC2D2AQ9P2K1 1620 aa12.58□□□□□ -0.4
TRIM6-203ENST00000380107 CFTRP13569 1480 aa12.57□□□□□ -0.4
TRIM6-203ENST00000380107 DDX10Q13206 875 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms