RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 NISCHQ9Y2I1 1504 aa18.72■□□□□ 0.59
PAX6-259ENST00000639916 AEBP2Q6ZN18 517 aaPredicted RBP17.48■□□□□ 0.39
PAX6-259ENST00000639916 CHIC1Q5VXU3 224 aa16.8■□□□□ 0.28
PAX6-259ENST00000639916 CCDC180Q9P1Z9 1646 aa16.09■□□□□ 0.17
PAX6-259ENST00000639916 ZCCHC6Q5VYS8 1495 aaKnown RBP15.76■□□□□ 0.11
PAX6-259ENST00000639916 SHROOM4Q9ULL8 1493 aa15.65■□□□□ 0.1
PAX6-259ENST00000639916 DCAF8L2P0C7V8 631 aa15.59■□□□□ 0.09
PAX6-259ENST00000639916 PELP1Q8IZL8 1130 aaKnown RBP15.57■□□□□ 0.08
PAX6-259ENST00000639916 DCAF1Q9Y4B6 1507 aa15.4■□□□□ 0.06
PAX6-259ENST00000639916 SUPT5HO00267 1087 aaKnown RBP15.22■□□□□ 0.03
PAX6-259ENST00000639916 HRCP23327 699 aa15.22■□□□□ 0.03
PAX6-259ENST00000639916 MYT1Q01538 1121 aa15.14■□□□□ 0.01
PAX6-259ENST00000639916 ABCC9O60706 1549 aa15.13■□□□□ 0.01
PAX6-259ENST00000639916 SENP3Q9H4L4 574 aaPredicted RBP15.13■□□□□ 0.01
PAX6-259ENST00000639916 MYO15BQ96JP2 1530 aa15.09■□□□□ 0.01
PAX6-259ENST00000639916 SCRIBQ14160 1630 aa14.97□□□□□ -0.01
PAX6-259ENST00000639916 NACADO15069 1562 aa14.97□□□□□ -0.01
PAX6-259ENST00000639916 PPARGC1BQ86YN6 1023 aaKnown RBP14.86□□□□□ -0.03
PAX6-259ENST00000639916 PHF23Q9BUL5 403 aaPredicted RBP14.83□□□□□ -0.03
PAX6-259ENST00000639916 RB1CC1Q8TDY2 1594 aa14.78□□□□□ -0.04
PAX6-259ENST00000639916 SCAF1Q9H7N4 1312 aaKnown RBP14.75□□□□□ -0.05
PAX6-259ENST00000639916 RSF1Q96T23 1441 aaPredicted RBP14.68□□□□□ -0.06
PAX6-259ENST00000639916 CECR2Q9BXF3 1484 aa14.59□□□□□ -0.07
PAX6-259ENST00000639916 PCGF6Q9BYE7 350 aa14.57□□□□□ -0.08
PAX6-259ENST00000639916 MROH2BQ7Z745 1585 aa14.51□□□□□ -0.09
PAX6-259ENST00000639916 UNC13AQ9UPW8 1703 aa14.5□□□□□ -0.09
PAX6-259ENST00000639916 BAZ1AQ9NRL2 1556 aaPredicted RBP14.41□□□□□ -0.1
PAX6-259ENST00000639916 TTBK1Q5TCY1 1321 aaPredicted RBP14.41□□□□□ -0.1
PAX6-259ENST00000639916 WIZO95785 1651 aa14.41□□□□□ -0.1
PAX6-259ENST00000639916 PABPN1Q86U42 306 aaKnown RBP eCLIP14.4□□□□□ -0.1
PAX6-259ENST00000639916 BICRAQ9NZM4 1560 aa14.36□□□□□ -0.11
PAX6-259ENST00000639916 SMARCA4P51532 1647 aa14.31□□□□□ -0.12
PAX6-259ENST00000639916 TRIM41Q8WV44 630 aa14.24□□□□□ -0.13
PAX6-259ENST00000639916 TOP2AP11388 1531 aaKnown RBP14.21□□□□□ -0.13
PAX6-259ENST00000639916 LOC105371045A0A1W2PR82 267 aa14.18□□□□□ -0.14
PAX6-259ENST00000639916 ACIN1Q9UKV3 1341 aaKnown RBP14.18□□□□□ -0.14
PAX6-259ENST00000639916 CCDC88BA6NC98 1476 aa14.13□□□□□ -0.15
PAX6-259ENST00000639916 BCL11AQ9H165 835 aa14.12□□□□□ -0.15
PAX6-259ENST00000639916 NEUROD1Q13562 356 aa14.11□□□□□ -0.15
PAX6-259ENST00000639916 SMARCA2P51531 1590 aa14.1□□□□□ -0.15
PAX6-259ENST00000639916 PEG3Q9GZU2 1588 aa14.08□□□□□ -0.15
PAX6-259ENST00000639916 GTF3C3Q9Y5Q9 886 aa14.08□□□□□ -0.16
PAX6-259ENST00000639916 EIF4G1Q04637 1599 aaKnown RBP14.06□□□□□ -0.16
PAX6-259ENST00000639916 FAM9AQ8IZU1 332 aaPredicted RBP14.06□□□□□ -0.16
PAX6-259ENST00000639916 PRKCSHP14314 528 aaPredicted RBP14.05□□□□□ -0.16
PAX6-259ENST00000639916 ATAD2BQ9ULI0 1458 aa14.04□□□□□ -0.16
PAX6-259ENST00000639916 ZEB1P37275 1124 aaPredicted RBP14.03□□□□□ -0.16
PAX6-259ENST00000639916 BAZ1BQ9UIG0 1483 aaKnown RBP13.98□□□□□ -0.17
PAX6-259ENST00000639916 CENPBP07199 599 aaPredicted RBP13.97□□□□□ -0.17
PAX6-259ENST00000639916 ABCC8Q09428 1581 aa13.95□□□□□ -0.18
PAX6-259ENST00000639916 TRIM26Q12899 539 aaPredicted RBP13.94□□□□□ -0.18
PAX6-259ENST00000639916 FOXD1Q16676 465 aa13.94□□□□□ -0.18
PAX6-259ENST00000639916 EHMT2Q96KQ7 1210 aa13.91□□□□□ -0.18
PAX6-259ENST00000639916 NCAPD3P42695 1498 aa13.85□□□□□ -0.19
PAX6-259ENST00000639916 DNAJC5BQ9UF47 199 aa13.82□□□□□ -0.2
PAX6-259ENST00000639916 HMGXB3Q12766 1538 aa13.81□□□□□ -0.2
PAX6-259ENST00000639916 WRNQ14191 1432 aaPredicted RBP eCLIP13.81□□□□□ -0.2
PAX6-259ENST00000639916 SOGA1O94964 1423 aa13.77□□□□□ -0.2
PAX6-259ENST00000639916 SYNJ1O43426 1573 aa13.72□□□□□ -0.21
PAX6-259ENST00000639916 CSRNP3Q8WYN3 585 aa13.71□□□□□ -0.22
PAX6-259ENST00000639916 ANP32EQ9BTT0 268 aa13.71□□□□□ -0.22
PAX6-259ENST00000639916 RUSC2Q8N2Y8 1516 aa13.71□□□□□ -0.22
PAX6-259ENST00000639916 EEA1Q15075 1411 aa13.7□□□□□ -0.22
PAX6-259ENST00000639916 ERICH6Q7L0X2 663 aa13.67□□□□□ -0.22
PAX6-259ENST00000639916 CC2D2AQ9P2K1 1620 aa13.64□□□□□ -0.23
PAX6-259ENST00000639916 CFTRP13569 1480 aa13.63□□□□□ -0.23
PAX6-259ENST00000639916 UBTFP17480 764 aaKnown RBP13.61□□□□□ -0.23
PAX6-259ENST00000639916 APLP2Q06481 763 aa13.61□□□□□ -0.23
PAX6-259ENST00000639916 TOP2BQ02880 1626 aa13.61□□□□□ -0.23
PAX6-259ENST00000639916 TNIKQ9UKE5 1360 aa13.59□□□□□ -0.23
PAX6-259ENST00000639916 DIEXFQ68CQ4 756 aaKnown RBP13.59□□□□□ -0.23
PAX6-259ENST00000639916 GOLGA3Q08378 1498 aa13.57□□□□□ -0.24
PAX6-259ENST00000639916 CEP162Q5TB80 1403 aa13.56□□□□□ -0.24
PAX6-259ENST00000639916 BIVM-ERCC5R4GMW8 1640 aa13.56□□□□□ -0.24
PAX6-259ENST00000639916 CADPSQ9ULU8 1353 aa13.55□□□□□ -0.24
PAX6-259ENST00000639916 CUX1P39880 1505 aa13.53□□□□□ -0.24
PAX6-259ENST00000639916 CEP164Q9UPV0 1460 aa13.53□□□□□ -0.24
PAX6-259ENST00000639916 PLPPR3Q6T4P5 718 aa13.51□□□□□ -0.25
PAX6-259ENST00000639916 KIF21BO75037 1637 aa13.5□□□□□ -0.25
PAX6-259ENST00000639916 PRDM2Q13029 1718 aa13.49□□□□□ -0.25
PAX6-259ENST00000639916 RAPGEF2Q9Y4G8 1499 aa13.46□□□□□ -0.26
PAX6-259ENST00000639916 YTHDC1Q96MU7 727 aaKnown RBP13.42□□□□□ -0.26
PAX6-259ENST00000639916 KIF27Q86VH2 1401 aa13.42□□□□□ -0.26
PAX6-259ENST00000639916 FANCD2Q9BXW9 1451 aa13.4□□□□□ -0.26
PAX6-259ENST00000639916 CLIP1P30622 1438 aa13.39□□□□□ -0.27
PAX6-259ENST00000639916 TSHZ2Q9NRE2 1034 aa13.39□□□□□ -0.27
PAX6-259ENST00000639916 PRXQ9BXM0 1461 aa13.39□□□□□ -0.27
PAX6-259ENST00000639916 NESP48681 1621 aa13.38□□□□□ -0.27
PAX6-259ENST00000639916 RANGAP1P46060 587 aaPredicted RBP13.38□□□□□ -0.27
PAX6-259ENST00000639916 ERICH3Q5RHP9 1530 aa13.36□□□□□ -0.27
PAX6-259ENST00000639916 FGD5Q6ZNL6 1462 aa13.35□□□□□ -0.27
PAX6-259ENST00000639916 CUX2O14529 1486 aa13.34□□□□□ -0.27
PAX6-259ENST00000639916 LAMC3Q9Y6N6 1575 aa13.3□□□□□ -0.28
PAX6-259ENST00000639916 IGF1RP08069 1367 aa13.3□□□□□ -0.28
PAX6-259ENST00000639916 VPS8Q8N3P4 1428 aa13.29□□□□□ -0.28
PAX6-259ENST00000639916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.29□□□□□ -0.28
PAX6-259ENST00000639916 DNMBPQ6XZF7 1577 aa13.29□□□□□ -0.28
PAX6-259ENST00000639916 TOPBP1Q92547 1522 aa13.28□□□□□ -0.28
PAX6-259ENST00000639916 CCER1Q8TC90 406 aaPredicted RBP13.27□□□□□ -0.29
PAX6-259ENST00000639916 SUPT16HQ9Y5B9 1047 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms