RNA–Protein interactions for RNA: ENST00000227348.8

CRTAM-201, Transcript of cytotoxic and regulatory T cell molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRTAM, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTAM-201ENST00000227348 NISCHQ9Y2I1 1504 aa20.08■□□□□ 0.81
CRTAM-201ENST00000227348 CHIC1Q5VXU3 224 aa19.49■□□□□ 0.71
CRTAM-201ENST00000227348 AEBP2Q6ZN18 517 aaPredicted RBP19.2■□□□□ 0.66
CRTAM-201ENST00000227348 CCDC180Q9P1Z9 1646 aa17.55■□□□□ 0.4
CRTAM-201ENST00000227348 PHF23Q9BUL5 403 aaPredicted RBP17.49■□□□□ 0.39
CRTAM-201ENST00000227348 ZCCHC6Q5VYS8 1495 aaKnown RBP16.88■□□□□ 0.29
CRTAM-201ENST00000227348 ABCC9O60706 1549 aa16.6■□□□□ 0.25
CRTAM-201ENST00000227348 DCAF1Q9Y4B6 1507 aa16.59■□□□□ 0.25
CRTAM-201ENST00000227348 DCAF8L2P0C7V8 631 aa16.52■□□□□ 0.23
CRTAM-201ENST00000227348 MYO15BQ96JP2 1530 aa16.39■□□□□ 0.21
CRTAM-201ENST00000227348 SHROOM4Q9ULL8 1493 aa16.36■□□□□ 0.21
CRTAM-201ENST00000227348 NACADO15069 1562 aa16.31■□□□□ 0.2
CRTAM-201ENST00000227348 PLPPR3Q6T4P5 718 aa16.21■□□□□ 0.19
CRTAM-201ENST00000227348 RB1CC1Q8TDY2 1594 aa16.18■□□□□ 0.18
CRTAM-201ENST00000227348 SCRIBQ14160 1630 aa16.15■□□□□ 0.18
CRTAM-201ENST00000227348 UNC13AQ9UPW8 1703 aa16■□□□□ 0.15
CRTAM-201ENST00000227348 EHMT2Q96KQ7 1210 aa15.9■□□□□ 0.14
CRTAM-201ENST00000227348 BICRAQ9NZM4 1560 aa15.77■□□□□ 0.12
CRTAM-201ENST00000227348 SENP3Q9H4L4 574 aaPredicted RBP15.77■□□□□ 0.11
CRTAM-201ENST00000227348 SUPT5HO00267 1087 aaKnown RBP15.68■□□□□ 0.1
CRTAM-201ENST00000227348 CECR2Q9BXF3 1484 aa15.64■□□□□ 0.09
CRTAM-201ENST00000227348 SLC24A1O60721 1099 aa15.63■□□□□ 0.09
CRTAM-201ENST00000227348 PABPN1Q86U42 306 aaKnown RBP eCLIP15.63■□□□□ 0.09
CRTAM-201ENST00000227348 KCNA4P22459 653 aa15.57■□□□□ 0.08
CRTAM-201ENST00000227348 RSF1Q96T23 1441 aaPredicted RBP15.57■□□□□ 0.08
CRTAM-201ENST00000227348 ADRA2BP18089 450 aa15.56■□□□□ 0.08
CRTAM-201ENST00000227348 MROH2BQ7Z745 1585 aa15.54■□□□□ 0.08
CRTAM-201ENST00000227348 BAZ1AQ9NRL2 1556 aaPredicted RBP15.49■□□□□ 0.07
CRTAM-201ENST00000227348 SMARCA4P51532 1647 aa15.47■□□□□ 0.07
CRTAM-201ENST00000227348 WIZO95785 1651 aa15.45■□□□□ 0.06
CRTAM-201ENST00000227348 PEG3Q9GZU2 1588 aa15.28■□□□□ 0.04
CRTAM-201ENST00000227348 EIF4G1Q04637 1599 aaKnown RBP15.25■□□□□ 0.03
CRTAM-201ENST00000227348 TOP2AP11388 1531 aaKnown RBP15.23■□□□□ 0.03
CRTAM-201ENST00000227348 ATAD2BQ9ULI0 1458 aa15.19■□□□□ 0.02
CRTAM-201ENST00000227348 PPP6R1Q9UPN7 881 aa15.18■□□□□ 0.02
CRTAM-201ENST00000227348 SMARCA2P51531 1590 aa15.16■□□□□ 0.02
CRTAM-201ENST00000227348 CSRNP3Q8WYN3 585 aa15.1■□□□□ 0.01
CRTAM-201ENST00000227348 BAZ1BQ9UIG0 1483 aaKnown RBP15.09■□□□□ 0.01
CRTAM-201ENST00000227348 CCDC88BA6NC98 1476 aa15.07■□□□□ 0
CRTAM-201ENST00000227348 CC2D2AQ9P2K1 1620 aa15.06■□□□□ 0
CRTAM-201ENST00000227348 HMGXB3Q12766 1538 aa15.05■□□□□ -0
CRTAM-201ENST00000227348 NCAPD3P42695 1498 aa15.05■□□□□ -0
CRTAM-201ENST00000227348 SLC4A1APQ9BWU0 796 aaKnown RBP14.84□□□□□ -0.03
CRTAM-201ENST00000227348 ABCC8Q09428 1581 aa14.79□□□□□ -0.04
CRTAM-201ENST00000227348 MYT1Q01538 1121 aa14.77□□□□□ -0.05
CRTAM-201ENST00000227348 FOXD1Q16676 465 aa14.76□□□□□ -0.05
CRTAM-201ENST00000227348 PRDM2Q13029 1718 aa14.73□□□□□ -0.05
CRTAM-201ENST00000227348 CFTRP13569 1480 aa14.72□□□□□ -0.05
CRTAM-201ENST00000227348 DNAJC5BQ9UF47 199 aa14.71□□□□□ -0.05
CRTAM-201ENST00000227348 TRIM41Q8WV44 630 aa14.71□□□□□ -0.05
CRTAM-201ENST00000227348 PELP1Q8IZL8 1130 aaKnown RBP14.65□□□□□ -0.06
CRTAM-201ENST00000227348 CADPSQ9ULU8 1353 aa14.65□□□□□ -0.06
CRTAM-201ENST00000227348 SYNJ1O43426 1573 aa14.64□□□□□ -0.07
CRTAM-201ENST00000227348 WRNQ14191 1432 aaPredicted RBP eCLIP14.62□□□□□ -0.07
CRTAM-201ENST00000227348 NESP48681 1621 aa14.6□□□□□ -0.07
CRTAM-201ENST00000227348 TTBK1Q5TCY1 1321 aaPredicted RBP14.57□□□□□ -0.08
CRTAM-201ENST00000227348 BIVM-ERCC5R4GMW8 1640 aa14.56□□□□□ -0.08
CRTAM-201ENST00000227348 TOP2BQ02880 1626 aa14.56□□□□□ -0.08
CRTAM-201ENST00000227348 LAMC3Q9Y6N6 1575 aa14.55□□□□□ -0.08
CRTAM-201ENST00000227348 CUX1P39880 1505 aa14.54□□□□□ -0.08
CRTAM-201ENST00000227348 PPP4R3CPQ6ZMV5 832 aa14.52□□□□□ -0.08
CRTAM-201ENST00000227348 FANCD2Q9BXW9 1451 aa14.51□□□□□ -0.09
CRTAM-201ENST00000227348 PRKCSHP14314 528 aaPredicted RBP14.51□□□□□ -0.09
CRTAM-201ENST00000227348 FAM9AQ8IZU1 332 aaPredicted RBP14.48□□□□□ -0.09
CRTAM-201ENST00000227348 SOGA1O94964 1423 aa14.47□□□□□ -0.09
CRTAM-201ENST00000227348 KIF21AQ7Z4S6 1674 aa14.47□□□□□ -0.09
CRTAM-201ENST00000227348 DAXXQ9UER7 740 aaPredicted RBP14.47□□□□□ -0.09
CRTAM-201ENST00000227348 LOC105371045A0A1W2PR82 267 aa14.46□□□□□ -0.1
CRTAM-201ENST00000227348 ZBTB22O15209 634 aa14.45□□□□□ -0.1
CRTAM-201ENST00000227348 RUSC2Q8N2Y8 1516 aa14.45□□□□□ -0.1
CRTAM-201ENST00000227348 CEP164Q9UPV0 1460 aa14.41□□□□□ -0.1
CRTAM-201ENST00000227348 PDS5BQ9NTI5 1447 aa14.39□□□□□ -0.11
CRTAM-201ENST00000227348 DNMBPQ6XZF7 1577 aa14.39□□□□□ -0.11
CRTAM-201ENST00000227348 URB2Q14146 1524 aaKnown RBP14.37□□□□□ -0.11
CRTAM-201ENST00000227348 TOPBP1Q92547 1522 aa14.37□□□□□ -0.11
CRTAM-201ENST00000227348 FGD5Q6ZNL6 1462 aa14.36□□□□□ -0.11
CRTAM-201ENST00000227348 EEA1Q15075 1411 aa14.35□□□□□ -0.11
CRTAM-201ENST00000227348 APLP2Q06481 763 aa14.34□□□□□ -0.11
CRTAM-201ENST00000227348 RTN4Q9NQC3 1192 aaKnown RBP14.34□□□□□ -0.11
CRTAM-201ENST00000227348 NPM3O75607 178 aaKnown RBP14.31□□□□□ -0.12
CRTAM-201ENST00000227348 POLA1P09884 1462 aaPredicted RBP14.3□□□□□ -0.12
CRTAM-201ENST00000227348 RAD54L2Q9Y4B4 1467 aa14.26□□□□□ -0.13
CRTAM-201ENST00000227348 WDR97A6NE52 1622 aa14.26□□□□□ -0.13
CRTAM-201ENST00000227348 MRC2Q9UBG0 1479 aa14.25□□□□□ -0.13
CRTAM-201ENST00000227348 KIF21BO75037 1637 aa14.25□□□□□ -0.13
CRTAM-201ENST00000227348 CUX2O14529 1486 aa14.23□□□□□ -0.13
CRTAM-201ENST00000227348 KIF27Q86VH2 1401 aa14.23□□□□□ -0.13
CRTAM-201ENST00000227348 ABCA10Q8WWZ4 1543 aa14.22□□□□□ -0.13
CRTAM-201ENST00000227348 THOC2Q8NI27 1593 aaKnown RBP14.22□□□□□ -0.13
CRTAM-201ENST00000227348 WDR62O43379 1518 aa14.21□□□□□ -0.13
CRTAM-201ENST00000227348 ERICH6Q7L0X2 663 aa14.2□□□□□ -0.14
CRTAM-201ENST00000227348 NCBP3Q53F19 620 aaKnown RBP14.19□□□□□ -0.14
CRTAM-201ENST00000227348 ERCC6Q03468 1493 aa14.19□□□□□ -0.14
CRTAM-201ENST00000227348 TARBP1Q13395 1621 aaKnown RBP14.19□□□□□ -0.14
CRTAM-201ENST00000227348 GOLGA3Q08378 1498 aa14.19□□□□□ -0.14
CRTAM-201ENST00000227348 RAPGEF2Q9Y4G8 1499 aa14.18□□□□□ -0.14
CRTAM-201ENST00000227348 PRXQ9BXM0 1461 aa14.17□□□□□ -0.14
CRTAM-201ENST00000227348 ABCA5Q8WWZ7 1642 aa14.15□□□□□ -0.14
CRTAM-201ENST00000227348 PIAS4Q8N2W9 510 aaPredicted RBP14.14□□□□□ -0.15
CRTAM-201ENST00000227348 ERICH3Q5RHP9 1530 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms