RNA–Protein interactions for RNA: ENST00000579458.1

PCAT18-201, prostate cancer associated transcript 18, humanhuman

TSL 2 BASIC

Gene PCAT18, Length 2,598 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT18-201ENST00000579458 SLC24A1O60721 1099 aa20.72■□□□□ 0.91
PCAT18-201ENST00000579458 CHIC1Q5VXU3 224 aa19.63■□□□□ 0.73
PCAT18-201ENST00000579458 EHMT2Q96KQ7 1210 aa19.43■□□□□ 0.7
PCAT18-201ENST00000579458 PLPPR3Q6T4P5 718 aa19.03■□□□□ 0.64
PCAT18-201ENST00000579458 RTN4Q9NQC3 1192 aaKnown RBP18.78■□□□□ 0.6
PCAT18-201ENST00000579458 DAXXQ9UER7 740 aaPredicted RBP18.66■□□□□ 0.58
PCAT18-201ENST00000579458 AEBP2Q6ZN18 517 aaPredicted RBP18.43■□□□□ 0.54
PCAT18-201ENST00000579458 NCBP3Q53F19 620 aaKnown RBP18.39■□□□□ 0.54
PCAT18-201ENST00000579458 PRKCSHP14314 528 aaPredicted RBP18.12■□□□□ 0.49
PCAT18-201ENST00000579458 KCNA4P22459 653 aa18.12■□□□□ 0.49
PCAT18-201ENST00000579458 AMER1Q5JTC6 1135 aaPredicted RBP18.07■□□□□ 0.48
PCAT18-201ENST00000579458 CSRNP3Q8WYN3 585 aa18■□□□□ 0.47
PCAT18-201ENST00000579458 PHF23Q9BUL5 403 aaPredicted RBP17.92■□□□□ 0.46
PCAT18-201ENST00000579458 APLP2Q06481 763 aa17.75■□□□□ 0.43
PCAT18-201ENST00000579458 TIMELESSQ9UNS1 1208 aa17.68■□□□□ 0.42
PCAT18-201ENST00000579458 ARXQ96QS3 562 aa17.56■□□□□ 0.4
PCAT18-201ENST00000579458 TTBK1Q5TCY1 1321 aaPredicted RBP17.56■□□□□ 0.4
PCAT18-201ENST00000579458 PELP1Q8IZL8 1130 aaKnown RBP17.48■□□□□ 0.39
PCAT18-201ENST00000579458 MYT1Q01538 1121 aa17.44■□□□□ 0.38
PCAT18-201ENST00000579458 ERICH6Q7L0X2 663 aa17.39■□□□□ 0.38
PCAT18-201ENST00000579458 TULP1O00294 542 aaPredicted RBP17.37■□□□□ 0.37
PCAT18-201ENST00000579458 TAOK2Q9UL54 1235 aa17.33■□□□□ 0.36
PCAT18-201ENST00000579458 TPRNQ4KMQ1 711 aa17.09■□□□□ 0.33
PCAT18-201ENST00000579458 KLHL34Q8N239 644 aa17.06■□□□□ 0.32
PCAT18-201ENST00000579458 RANGAP1P46060 587 aaPredicted RBP17.04■□□□□ 0.32
PCAT18-201ENST00000579458 HOMEZQ8IX15 550 aa17.03■□□□□ 0.32
PCAT18-201ENST00000579458 BCANQ96GW7 911 aa16.97■□□□□ 0.31
PCAT18-201ENST00000579458 SLC4A1APQ9BWU0 796 aaKnown RBP16.94■□□□□ 0.3
PCAT18-201ENST00000579458 NISCHQ9Y2I1 1504 aa16.89■□□□□ 0.3
PCAT18-201ENST00000579458 PODXL2Q9NZ53 605 aa16.87■□□□□ 0.29
PCAT18-201ENST00000579458 PLCB2Q00722 1185 aa16.76■□□□□ 0.27
PCAT18-201ENST00000579458 EIF5BO60841 1220 aaKnown RBP16.73■□□□□ 0.27
PCAT18-201ENST00000579458 GTF3C3Q9Y5Q9 886 aa16.73■□□□□ 0.27
PCAT18-201ENST00000579458 HAP1P54257 671 aaPredicted RBP16.64■□□□□ 0.25
PCAT18-201ENST00000579458 ZBTB22O15209 634 aa16.51■□□□□ 0.23
PCAT18-201ENST00000579458 NPM2Q86SE8 214 aaKnown RBP16.43■□□□□ 0.22
PCAT18-201ENST00000579458 PLEKHG5O94827 1062 aa16.38■□□□□ 0.21
PCAT18-201ENST00000579458 TMEM132AQ24JP5 1023 aa16.34■□□□□ 0.21
PCAT18-201ENST00000579458 ADRA2BP18089 450 aa16.33■□□□□ 0.2
PCAT18-201ENST00000579458 C14orf37Q86TY3 774 aa16.28■□□□□ 0.2
PCAT18-201ENST00000579458 TRIM26Q12899 539 aaPredicted RBP16.2■□□□□ 0.18
PCAT18-201ENST00000579458 KDM2AQ9Y2K7 1162 aa16.17■□□□□ 0.18
PCAT18-201ENST00000579458 SUPT5HO00267 1087 aaKnown RBP16.12■□□□□ 0.17
PCAT18-201ENST00000579458 FKBP8Q14318 412 aa16.07■□□□□ 0.16
PCAT18-201ENST00000579458 VSIG10Q8N0Z9 540 aa16.07■□□□□ 0.16
PCAT18-201ENST00000579458 FBLN2P98095 1184 aa16.06■□□□□ 0.16
PCAT18-201ENST00000579458 LOC105371045A0A1W2PR82 267 aa16.05■□□□□ 0.16
PCAT18-201ENST00000579458 UBTFP17480 764 aaKnown RBP16■□□□□ 0.15
PCAT18-201ENST00000579458 HRCP23327 699 aa15.99■□□□□ 0.15
PCAT18-201ENST00000579458 FBXO3Q9UK99 471 aa15.98■□□□□ 0.15
PCAT18-201ENST00000579458 NPM3O75607 178 aaKnown RBP15.83■□□□□ 0.13
PCAT18-201ENST00000579458 DCAF8L2P0C7V8 631 aa15.72■□□□□ 0.11
PCAT18-201ENST00000579458 PPP6R1Q9UPN7 881 aa15.68■□□□□ 0.1
PCAT18-201ENST00000579458 CHMP4AQ9BY43 222 aa15.56■□□□□ 0.08
PCAT18-201ENST00000579458 PDIA4P13667 645 aaKnown RBP15.52■□□□□ 0.08
PCAT18-201ENST00000579458 BCL11AQ9H165 835 aa15.5■□□□□ 0.07
PCAT18-201ENST00000579458 IGSF3O75054 1194 aa15.46■□□□□ 0.07
PCAT18-201ENST00000579458 SAMD1Q6SPF0 538 aaPredicted RBP15.43■□□□□ 0.06
PCAT18-201ENST00000579458 DHX37Q8IY37 1157 aaKnown RBP15.35■□□□□ 0.05
PCAT18-201ENST00000579458 PAXIP1Q6ZW49 1069 aaPredicted RBP15.31■□□□□ 0.04
PCAT18-201ENST00000579458 CDK11BP21127 795 aaKnown RBP15.31■□□□□ 0.04
PCAT18-201ENST00000579458 CDK11AQ9UQ88 783 aaPredicted RBP15.31■□□□□ 0.04
PCAT18-201ENST00000579458 UBE2Q2Q8WVN8 375 aa15.3■□□□□ 0.04
PCAT18-201ENST00000579458 TSHZ2Q9NRE2 1034 aa15.3■□□□□ 0.04
PCAT18-201ENST00000579458 CFAP44Q96MT7 982 aa15.29■□□□□ 0.04
PCAT18-201ENST00000579458 NBR1Q14596 966 aa15.27■□□□□ 0.04
PCAT18-201ENST00000579458 CNKSR2Q8WXI2 1034 aa15.27■□□□□ 0.03
PCAT18-201ENST00000579458 TRHP20396 242 aaPredicted RBP15.25■□□□□ 0.03
PCAT18-201ENST00000579458 PPP4R3CPQ6ZMV5 832 aa15.25■□□□□ 0.03
PCAT18-201ENST00000579458 FOXD4L1Q9NU39 408 aa15.24■□□□□ 0.03
PCAT18-201ENST00000579458 SHROOM4Q9ULL8 1493 aa15.18■□□□□ 0.02
PCAT18-201ENST00000579458 ARID3AQ99856 593 aa15.17■□□□□ 0.02
PCAT18-201ENST00000579458 FAM9AQ8IZU1 332 aaPredicted RBP15.15■□□□□ 0.02
PCAT18-201ENST00000579458 CCDC9Q9Y3X0 531 aaKnown RBP15.13■□□□□ 0.01
PCAT18-201ENST00000579458 NPM1P06748 294 aaKnown RBP eCLIP15.12■□□□□ 0.01
PCAT18-201ENST00000579458 PDE4CQ08493 712 aa15.11■□□□□ 0.01
PCAT18-201ENST00000579458 CCDC180Q9P1Z9 1646 aa15.1■□□□□ 0.01
PCAT18-201ENST00000579458 NECTIN2Q92692 538 aa15.08■□□□□ 0
PCAT18-201ENST00000579458 BRD2P25440 801 aaKnown RBP15.07■□□□□ 0
PCAT18-201ENST00000579458 HSP90B1P14625 803 aaKnown RBP15.02□□□□□ -0.01
PCAT18-201ENST00000579458 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.01□□□□□ -0.01
PCAT18-201ENST00000579458 PKD2Q13563 968 aa15.01□□□□□ -0.01
PCAT18-201ENST00000579458 ABCC9O60706 1549 aa14.95□□□□□ -0.02
PCAT18-201ENST00000579458 BBXQ8WY36 941 aaPredicted RBP14.94□□□□□ -0.02
PCAT18-201ENST00000579458 C1orf115Q9H7X2 142 aa14.92□□□□□ -0.02
PCAT18-201ENST00000579458 BRPF1P55201 1214 aaPredicted RBP14.89□□□□□ -0.03
PCAT18-201ENST00000579458 TAF7LQ5H9L4 462 aa14.88□□□□□ -0.03
PCAT18-201ENST00000579458 ZBTB7CA1YPR0 619 aa14.87□□□□□ -0.03
PCAT18-201ENST00000579458 ZNF428Q96B54 188 aa14.87□□□□□ -0.03
PCAT18-201ENST00000579458 HMGB1P09429 215 aaKnown RBP14.84□□□□□ -0.03
PCAT18-201ENST00000579458 PUS7Q96PZ0 661 aaKnown RBP14.83□□□□□ -0.03
PCAT18-201ENST00000579458 POLR3GLQ9BT43 218 aa14.82□□□□□ -0.04
PCAT18-201ENST00000579458 BCL11BQ9C0K0 894 aaPredicted RBP14.79□□□□□ -0.04
PCAT18-201ENST00000579458 DNAJC5Q9H3Z4 198 aa14.76□□□□□ -0.05
PCAT18-201ENST00000579458 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.73□□□□□ -0.05
PCAT18-201ENST00000579458 SPRYD3Q8NCJ5 442 aa14.73□□□□□ -0.05
PCAT18-201ENST00000579458 NEFLP07196 543 aa14.73□□□□□ -0.05
PCAT18-201ENST00000579458 ARID3CA6NKF2 412 aa14.71□□□□□ -0.06
PCAT18-201ENST00000579458 ZMYND15Q9H091 742 aa14.67□□□□□ -0.06
PCAT18-201ENST00000579458 IFNLR1Q8IU57 520 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms