Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 KANSL3-203ENST00000418735 594 ntTSL 410.29□□□□□ -0.762e-19■■□□□ 14.3
PRPF8Q6P2Q9 SPHK1-208ENST00000591651 541 ntTSL 417.47■□□□□ 0.397e-11■■□□□ 14.3
PRPF8Q6P2Q9 SP3-207ENST00000490182 459 ntTSL 416.43■□□□□ 0.221e-6■■□□□ 14.3
PRPF8Q6P2Q9 CSNK1D-223ENST00000584472 586 ntTSL 413.48□□□□□ -0.258e-12■■□□□ 14.3
PRPF8Q6P2Q9 CSNK1D-211ENST00000579316 692 ntTSL 212.76□□□□□ -0.378e-12■■□□□ 14.3
PRPF8Q6P2Q9 CSNK1D-226ENST00000585026 563 ntTSL 59.42□□□□□ -0.98e-12■■□□□ 14.3
PRPF8Q6P2Q9 GABBR1-208ENST00000472823 4286 ntTSL 515.15■□□□□ 0.023e-7■■□□□ 14.3
PRPF8Q6P2Q9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.78□□□□□ -0.043e-7■■□□□ 14.3
PRPF8Q6P2Q9 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.113e-7■■□□□ 14.3
PRPF8Q6P2Q9 GABBR1-218ENST00000491829 4212 ntTSL 512.04□□□□□ -0.483e-7■■□□□ 14.3
PRPF8Q6P2Q9 ZGPAT-208ENST00000472711 787 ntTSL 316.9■□□□□ 0.39e-9■■□□□ 14.3
PRPF8Q6P2Q9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.299e-9■■□□□ 14.3
PRPF8Q6P2Q9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.16■□□□□ 0.189e-9■■□□□ 14.3
PRPF8Q6P2Q9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.149e-9■■□□□ 14.3
PRPF8Q6P2Q9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.63■□□□□ 0.099e-9■■□□□ 14.3
PRPF8Q6P2Q9 ZGPAT-210ENST00000478385 935 ntTSL 214.81□□□□□ -0.049e-9■■□□□ 14.3
PRPF8Q6P2Q9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.099e-9■■□□□ 14.3
PRPF8Q6P2Q9 ZGPAT-209ENST00000477340 2831 ntTSL 212.17□□□□□ -0.469e-9■■□□□ 14.3
PRPF8Q6P2Q9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.052e-10■■□□□ 14.3
PRPF8Q6P2Q9 EVL-213ENST00000554695 1119 ntTSL 513.69□□□□□ -0.222e-10■■□□□ 14.3
PRPF8Q6P2Q9 EVL-204ENST00000553694 890 ntTSL 213.67□□□□□ -0.222e-10■■□□□ 14.3
PRPF8Q6P2Q9 EVL-209ENST00000554031 819 ntTSL 512.66□□□□□ -0.382e-10■■□□□ 14.3
PRPF8Q6P2Q9 EVL-212ENST00000554518 525 ntTSL 212.12□□□□□ -0.472e-10■■□□□ 14.3
PRPF8Q6P2Q9 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.722e-10■■□□□ 14.3
PRPF8Q6P2Q9 EVL-210ENST00000554045 1754 ntTSL 59.8□□□□□ -0.842e-10■■□□□ 14.3
PRPF8Q6P2Q9 EVL-203ENST00000544450 3704 ntTSL 2 BASIC8.94□□□□□ -0.982e-10■■□□□ 14.3
PRPF8Q6P2Q9 BAIAP2-225ENST00000576225 2316 ntTSL 213.88□□□□□ -0.194e-7■■□□□ 14.3
PRPF8Q6P2Q9 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC11.42□□□□□ -0.581e-6■■□□□ 14.3
PRPF8Q6P2Q9 DHDDS-216ENST00000525682 1235 ntTSL 2 BASIC10.1□□□□□ -0.791e-6■■□□□ 14.3
PRPF8Q6P2Q9 DHDDS-201ENST00000236342 1403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.811e-6■■□□□ 14.3
PRPF8Q6P2Q9 DHDDS-202ENST00000360009 3245 ntAPPRIS P4 TSL 2 BASIC8.18□□□□□ -1.11e-6■■□□□ 14.3
PRPF8Q6P2Q9 DHDDS-209ENST00000434391 3338 ntTSL 1 (best)7.56□□□□□ -1.21e-6■■□□□ 14.3
PRPF8Q6P2Q9 DHDDS-207ENST00000430232 703 ntTSL 27.01□□□□□ -1.291e-6■■□□□ 14.3
PRPF8Q6P2Q9 ZNF692-225ENST00000533614 553 ntTSL 419.43■□□□□ 0.73e-10■■□□□ 14.3
PRPF8Q6P2Q9 ZNF692-224ENST00000530986 595 ntTSL 417.93■□□□□ 0.463e-10■■□□□ 14.3
PRPF8Q6P2Q9 ZNF692-218ENST00000496053 694 ntTSL 315.74■□□□□ 0.113e-10■■□□□ 14.3
PRPF8Q6P2Q9 ZNF692-215ENST00000483791 681 ntTSL 315.57■□□□□ 0.083e-10■■□□□ 14.3
PRPF8Q6P2Q9 ZNF692-221ENST00000497847 1031 ntTSL 215.57■□□□□ 0.082e-13■■□□□ 14.3
PRPF8Q6P2Q9 ZNF692-223ENST00000530699 896 ntTSL 1 (best)14.35□□□□□ -0.113e-10■■□□□ 14.3
PRPF8Q6P2Q9 ZNF692-230ENST00000534660 552 ntTSL 311.33□□□□□ -0.63e-10■■□□□ 14.3
PRPF8Q6P2Q9 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.48□□□□□ -0.253e-7■■□□□ 14.3
PRPF8Q6P2Q9 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.161e-6■■□□□ 14.3
PRPF8Q6P2Q9 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.51e-6■■□□□ 14.3
PRPF8Q6P2Q9 NME1-NME2-201ENST00000376392 894 ntTSL 5 BASIC10.16□□□□□ -0.781e-6■■□□□ 14.3
PRPF8Q6P2Q9 GTF3C1-203ENST00000562609 2824 ntTSL 510.66□□□□□ -0.72e-6■■□□□ 14.2
PRPF8Q6P2Q9 SREBF1-220ENST00000581707 695 ntTSL 216.66■□□□□ 0.263e-14■■□□□ 14.2
PRPF8Q6P2Q9 SYNJ2-204ENST00000367122 3029 ntTSL 1 (best) BASIC7.29□□□□□ -1.243e-9■■□□□ 14.2
PRPF8Q6P2Q9 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.365e-10■■□□□ 14.2
PRPF8Q6P2Q9 GDI1-211ENST00000481304 1014 ntTSL 1 (best)14.1□□□□□ -0.156e-46■■□□□ 14.2
PRPF8Q6P2Q9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.68□□□□□ -0.061e-6■■□□□ 14.2
PRPF8Q6P2Q9 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.61e-6■■□□□ 14.2
PRPF8Q6P2Q9 TMUB2-210ENST00000588413 747 ntTSL 211.13□□□□□ -0.631e-6■■□□□ 14.2
PRPF8Q6P2Q9 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC10.95□□□□□ -0.661e-6■■□□□ 14.2
PRPF8Q6P2Q9 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC10.93□□□□□ -0.661e-6■■□□□ 14.2
PRPF8Q6P2Q9 TMUB2-207ENST00000587630 1191 ntTSL 310.8□□□□□ -0.681e-6■■□□□ 14.2
PRPF8Q6P2Q9 TMUB2-206ENST00000587326 1839 ntTSL 1 (best)10.63□□□□□ -0.711e-6■■□□□ 14.2
PRPF8Q6P2Q9 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC10□□□□□ -0.811e-6■■□□□ 14.2
PRPF8Q6P2Q9 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.91e-6■■□□□ 14.2
PRPF8Q6P2Q9 TMUB2-208ENST00000587775 546 ntTSL 37.59□□□□□ -1.191e-6■■□□□ 14.2
PRPF8Q6P2Q9 SGPL1-206ENST00000613857 541 ntTSL 410.66□□□□□ -0.75e-11■■□□□ 14.2
PRPF8Q6P2Q9 CSNK1E-208ENST00000431611 814 ntTSL 513.01□□□□□ -0.332e-7■■□□□ 14.2
PRPF8Q6P2Q9 CSNK1E-209ENST00000431632 763 ntTSL 212□□□□□ -0.492e-11■■□□□ 14.2
PRPF8Q6P2Q9 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.12■□□□□ 0.332e-9■■□□□ 14.2
PRPF8Q6P2Q9 PLPP3-203ENST00000461655 646 ntTSL 33.02□□□□□ -1.931e-16■■□□□ 14.2
PRPF8Q6P2Q9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.154e-7■■□□□ 14.2
PRPF8Q6P2Q9 SERINC2-204ENST00000491976 2807 ntTSL 212.86□□□□□ -0.354e-7■■□□□ 14.2
PRPF8Q6P2Q9 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC12.5□□□□□ -0.414e-7■■□□□ 14.2
PRPF8Q6P2Q9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC12.24□□□□□ -0.454e-7■■□□□ 14.2
PRPF8Q6P2Q9 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC11.81□□□□□ -0.524e-7■■□□□ 14.2
PRPF8Q6P2Q9 FLOT1-208ENST00000470643 852 ntTSL 318.55■□□□□ 0.562e-9■■□□□ 14.2
PRPF8Q6P2Q9 FLOT1-205ENST00000438162 888 ntTSL 511.4□□□□□ -0.592e-9■■□□□ 14.2
PRPF8Q6P2Q9 MRPL28-204ENST00000441883 800 ntTSL 523.33■■□□□ 1.332e-7■■□□□ 14.2
PRPF8Q6P2Q9 MRPL28-205ENST00000447696 722 ntTSL 320.43■□□□□ 0.862e-7■■□□□ 14.2
PRPF8Q6P2Q9 MRPL28-208ENST00000469744 1467 ntTSL 1 (best)14.97□□□□□ -0.012e-7■■□□□ 14.2
PRPF8Q6P2Q9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.032e-7■■□□□ 14.2
PRPF8Q6P2Q9 MRPL28-209ENST00000481453 2229 ntTSL 214.27□□□□□ -0.132e-7■■□□□ 14.2
PRPF8Q6P2Q9 MRPL28-210ENST00000483764 1512 ntTSL 1 (best)13.79□□□□□ -0.22e-7■■□□□ 14.2
PRPF8Q6P2Q9 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.222e-7■■□□□ 14.2
PRPF8Q6P2Q9 MRPL28-206ENST00000450882 619 ntTSL 313.68□□□□□ -0.222e-7■■□□□ 14.2
PRPF8Q6P2Q9 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.945e-7■■□□□ 14.2
PRPF8Q6P2Q9 EFNA1-203ENST00000469878 1288 ntTSL 311.65□□□□□ -0.545e-7■■□□□ 14.2
PRPF8Q6P2Q9 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC10.56□□□□□ -0.725e-7■■□□□ 14.2
PRPF8Q6P2Q9 TMEM132A-207ENST00000537065 324 ntTSL 322.77■■□□□ 1.246e-9■■□□□ 14.2
PRPF8Q6P2Q9 TMEM132A-212ENST00000543732 742 ntTSL 319.62■□□□□ 0.736e-9■■□□□ 14.2
PRPF8Q6P2Q9 DDOST-205ENST00000477229 766 ntTSL 214.52□□□□□ -0.086e-9■■□□□ 14.2
PRPF8Q6P2Q9 DDOST-203ENST00000464364 502 ntTSL 512.05□□□□□ -0.486e-9■■□□□ 14.2
PRPF8Q6P2Q9 ATP5A1-209ENST00000589611 995 ntTSL 28.03□□□□□ -1.123e-7■■□□□ 14.2
PRPF8Q6P2Q9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.51□□□□□ -0.094e-7■■□□□ 14.2
PRPF8Q6P2Q9 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.26□□□□□ -0.457e-7■■□□□ 14.2
PRPF8Q6P2Q9 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC10.89□□□□□ -0.677e-7■■□□□ 14.2
PRPF8Q6P2Q9 TMEM106A-205ENST00000588693 913 ntTSL 510.89□□□□□ -0.677e-7■■□□□ 14.2
PRPF8Q6P2Q9 TMEM106A-204ENST00000588659 1437 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.727e-7■■□□□ 14.2
PRPF8Q6P2Q9 TMEM106A-208ENST00000612339 3266 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.37e-7■■□□□ 14.2
PRPF8Q6P2Q9 MAN2C1-230ENST00000566099 1316 ntTSL 518.63■□□□□ 0.573e-13■■□□□ 14.2
PRPF8Q6P2Q9 RABGGTA-203ENST00000543002 1329 ntTSL 214.26□□□□□ -0.132e-6■■□□□ 14.2
PRPF8Q6P2Q9 SSR2-204ENST00000467041 577 ntTSL 319.34■□□□□ 0.692e-6■■□□□ 14.2
PRPF8Q6P2Q9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.57■□□□□ 0.569e-8■■□□□ 14.2
PRPF8Q6P2Q9 TPD52-226ENST00000523753 587 ntTSL 416.67■□□□□ 0.262e-6■■□□□ 14.2
PRPF8Q6P2Q9 XRCC3-217ENST00000556980 801 ntTSL 515.16■□□□□ 0.023e-12■■□□□ 14.2
PRPF8Q6P2Q9 XRCC3-215ENST00000555964 562 ntTSL 414.97□□□□□ -0.013e-12■■□□□ 14.2
Retrieved 100 of 73,762 protein–RNA pairs in 1335.8 ms