RNA–Protein interactions for RNA: ENST00000612339.4

TMEM106A-208, Transcript of transmembrane protein 106A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM106A, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106A-208ENST00000612339 NISCHQ9Y2I1 1504 aa17.62■□□□□ 0.41
TMEM106A-208ENST00000612339 CCDC180Q9P1Z9 1646 aa16.06■□□□□ 0.16
TMEM106A-208ENST00000612339 AEBP2Q6ZN18 517 aaPredicted RBP15.94■□□□□ 0.14
TMEM106A-208ENST00000612339 CHIC1Q5VXU3 224 aa15.82■□□□□ 0.12
TMEM106A-208ENST00000612339 SHROOM4Q9ULL8 1493 aa15.5■□□□□ 0.07
TMEM106A-208ENST00000612339 SUPT5HO00267 1087 aaKnown RBP15.49■□□□□ 0.07
TMEM106A-208ENST00000612339 HRCP23327 699 aa15.4■□□□□ 0.06
TMEM106A-208ENST00000612339 PCGF6Q9BYE7 350 aa15.31■□□□□ 0.04
TMEM106A-208ENST00000612339 PPARGC1BQ86YN6 1023 aaKnown RBP15.24■□□□□ 0.03
TMEM106A-208ENST00000612339 MYO15BQ96JP2 1530 aa15.21■□□□□ 0.03
TMEM106A-208ENST00000612339 DCAF1Q9Y4B6 1507 aa15.16■□□□□ 0.02
TMEM106A-208ENST00000612339 ZCCHC6Q5VYS8 1495 aaKnown RBP14.87□□□□□ -0.03
TMEM106A-208ENST00000612339 DCAF8L2P0C7V8 631 aa14.83□□□□□ -0.04
TMEM106A-208ENST00000612339 PELP1Q8IZL8 1130 aaKnown RBP14.82□□□□□ -0.04
TMEM106A-208ENST00000612339 LOC105371045A0A1W2PR82 267 aa14.79□□□□□ -0.04
TMEM106A-208ENST00000612339 NACADO15069 1562 aa14.76□□□□□ -0.05
TMEM106A-208ENST00000612339 TRIM26Q12899 539 aaPredicted RBP14.67□□□□□ -0.06
TMEM106A-208ENST00000612339 SCAF1Q9H7N4 1312 aaKnown RBP14.58□□□□□ -0.07
TMEM106A-208ENST00000612339 RB1CC1Q8TDY2 1594 aa14.53□□□□□ -0.08
TMEM106A-208ENST00000612339 ZEB1P37275 1124 aaPredicted RBP14.53□□□□□ -0.08
TMEM106A-208ENST00000612339 EHMT2Q96KQ7 1210 aa14.49□□□□□ -0.09
TMEM106A-208ENST00000612339 FAM9AQ8IZU1 332 aaPredicted RBP14.41□□□□□ -0.1
TMEM106A-208ENST00000612339 UNC13AQ9UPW8 1703 aa14.32□□□□□ -0.12
TMEM106A-208ENST00000612339 ACIN1Q9UKV3 1341 aaKnown RBP14.26□□□□□ -0.13
TMEM106A-208ENST00000612339 NEUROD1Q13562 356 aa14.25□□□□□ -0.13
TMEM106A-208ENST00000612339 TRIM41Q8WV44 630 aa14.24□□□□□ -0.13
TMEM106A-208ENST00000612339 GTF3C3Q9Y5Q9 886 aa14.24□□□□□ -0.13
TMEM106A-208ENST00000612339 MYT1Q01538 1121 aa14.22□□□□□ -0.13
TMEM106A-208ENST00000612339 CCER1Q8TC90 406 aaPredicted RBP14.21□□□□□ -0.14
TMEM106A-208ENST00000612339 CENPBP07199 599 aaPredicted RBP14.2□□□□□ -0.14
TMEM106A-208ENST00000612339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.19□□□□□ -0.14
TMEM106A-208ENST00000612339 ABCC9O60706 1549 aa14.16□□□□□ -0.14
TMEM106A-208ENST00000612339 PHF23Q9BUL5 403 aaPredicted RBP14.14□□□□□ -0.15
TMEM106A-208ENST00000612339 TTBK1Q5TCY1 1321 aaPredicted RBP14.12□□□□□ -0.15
TMEM106A-208ENST00000612339 DIEXFQ68CQ4 756 aaKnown RBP14.11□□□□□ -0.15
TMEM106A-208ENST00000612339 YTHDC1Q96MU7 727 aaKnown RBP14.08□□□□□ -0.16
TMEM106A-208ENST00000612339 BICRAQ9NZM4 1560 aa14.07□□□□□ -0.16
TMEM106A-208ENST00000612339 PEG3Q9GZU2 1588 aa13.92□□□□□ -0.18
TMEM106A-208ENST00000612339 SCRIBQ14160 1630 aa13.8□□□□□ -0.2
TMEM106A-208ENST00000612339 ZNF316A6NFI3 1004 aaPredicted RBP13.79□□□□□ -0.2
TMEM106A-208ENST00000612339 RSF1Q96T23 1441 aaPredicted RBP13.75□□□□□ -0.21
TMEM106A-208ENST00000612339 MIER1Q8N108 512 aa13.73□□□□□ -0.21
TMEM106A-208ENST00000612339 SMARCA2P51531 1590 aa13.71□□□□□ -0.21
TMEM106A-208ENST00000612339 BAZ1AQ9NRL2 1556 aaPredicted RBP13.69□□□□□ -0.22
TMEM106A-208ENST00000612339 HNRNPUL2Q1KMD3 747 aaKnown RBP13.65□□□□□ -0.22
TMEM106A-208ENST00000612339 SMARCA4P51532 1647 aa13.64□□□□□ -0.23
TMEM106A-208ENST00000612339 HMGXB3Q12766 1538 aa13.62□□□□□ -0.23
TMEM106A-208ENST00000612339 UBTFP17480 764 aaKnown RBP13.61□□□□□ -0.23
TMEM106A-208ENST00000612339 EIF4G1Q04637 1599 aaKnown RBP13.53□□□□□ -0.24
TMEM106A-208ENST00000612339 RANGAP1P46060 587 aaPredicted RBP13.48□□□□□ -0.25
TMEM106A-208ENST00000612339 PRDM2Q13029 1718 aa13.47□□□□□ -0.25
TMEM106A-208ENST00000612339 SUPT16HQ9Y5B9 1047 aaKnown RBP13.47□□□□□ -0.25
TMEM106A-208ENST00000612339 NCAPD3P42695 1498 aa13.46□□□□□ -0.25
TMEM106A-208ENST00000612339 CEP162Q5TB80 1403 aa13.46□□□□□ -0.25
TMEM106A-208ENST00000612339 APLP2Q06481 763 aa13.44□□□□□ -0.26
TMEM106A-208ENST00000612339 BCANQ96GW7 911 aa13.44□□□□□ -0.26
TMEM106A-208ENST00000612339 ANP32EQ9BTT0 268 aa13.42□□□□□ -0.26
TMEM106A-208ENST00000612339 TOP2AP11388 1531 aaKnown RBP13.42□□□□□ -0.26
TMEM106A-208ENST00000612339 CECR2Q9BXF3 1484 aa13.41□□□□□ -0.26
TMEM106A-208ENST00000612339 BCL11AQ9H165 835 aa13.4□□□□□ -0.26
TMEM106A-208ENST00000612339 TSHZ2Q9NRE2 1034 aa13.38□□□□□ -0.27
TMEM106A-208ENST00000612339 CSRNP3Q8WYN3 585 aa13.36□□□□□ -0.27
TMEM106A-208ENST00000612339 WRNQ14191 1432 aaPredicted RBP eCLIP13.35□□□□□ -0.27
TMEM106A-208ENST00000612339 MROH2BQ7Z745 1585 aa13.34□□□□□ -0.27
TMEM106A-208ENST00000612339 ATAD2BQ9ULI0 1458 aa13.32□□□□□ -0.28
TMEM106A-208ENST00000612339 SOGA1O94964 1423 aa13.32□□□□□ -0.28
TMEM106A-208ENST00000612339 CCDC88BA6NC98 1476 aa13.31□□□□□ -0.28
TMEM106A-208ENST00000612339 CC2D2AQ9P2K1 1620 aa13.31□□□□□ -0.28
TMEM106A-208ENST00000612339 CLSPNQ9HAW4 1339 aa13.31□□□□□ -0.28
TMEM106A-208ENST00000612339 TNIKQ9UKE5 1360 aa13.31□□□□□ -0.28
TMEM106A-208ENST00000612339 ABCC8Q09428 1581 aa13.3□□□□□ -0.28
TMEM106A-208ENST00000612339 WIZO95785 1651 aa13.29□□□□□ -0.28
TMEM106A-208ENST00000612339 FKBP8Q14318 412 aa13.26□□□□□ -0.29
TMEM106A-208ENST00000612339 NEFLP07196 543 aa13.22□□□□□ -0.29
TMEM106A-208ENST00000612339 RUSC2Q8N2Y8 1516 aa13.21□□□□□ -0.29
TMEM106A-208ENST00000612339 ITGAEP38570 1179 aa13.21□□□□□ -0.29
TMEM106A-208ENST00000612339 KCNH8Q96L42 1107 aa13.21□□□□□ -0.3
TMEM106A-208ENST00000612339 SENP3Q9H4L4 574 aaPredicted RBP13.18□□□□□ -0.3
TMEM106A-208ENST00000612339 GOLGA3Q08378 1498 aa13.16□□□□□ -0.3
TMEM106A-208ENST00000612339 ERICH6Q7L0X2 663 aa13.15□□□□□ -0.3
TMEM106A-208ENST00000612339 LAMC3Q9Y6N6 1575 aa13.15□□□□□ -0.31
TMEM106A-208ENST00000612339 CLIP1P30622 1438 aa13.14□□□□□ -0.31
TMEM106A-208ENST00000612339 RBM19Q9Y4C8 960 aaKnown RBP13.12□□□□□ -0.31
TMEM106A-208ENST00000612339 BAZ1BQ9UIG0 1483 aaKnown RBP13.11□□□□□ -0.31
TMEM106A-208ENST00000612339 EEA1Q15075 1411 aa13.1□□□□□ -0.31
TMEM106A-208ENST00000612339 DDX10Q13206 875 aaKnown RBP13.1□□□□□ -0.31
TMEM106A-208ENST00000612339 TRIM52Q96A61 297 aa13.09□□□□□ -0.31
TMEM106A-208ENST00000612339 WDR97A6NE52 1622 aa13.08□□□□□ -0.32
TMEM106A-208ENST00000612339 DHX57Q6P158 1386 aaKnown RBP13.07□□□□□ -0.32
TMEM106A-208ENST00000612339 VPS8Q8N3P4 1428 aa13.04□□□□□ -0.32
TMEM106A-208ENST00000612339 HIRIP3Q9BW71 556 aaPredicted RBP13.03□□□□□ -0.32
TMEM106A-208ENST00000612339 CFTRP13569 1480 aa13.01□□□□□ -0.33
TMEM106A-208ENST00000612339 CEP164Q9UPV0 1460 aa13.01□□□□□ -0.33
TMEM106A-208ENST00000612339 IRX6P78412 446 aaPredicted RBP12.98□□□□□ -0.33
TMEM106A-208ENST00000612339 KANK4Q5T7N3 995 aaPredicted RBP12.98□□□□□ -0.33
TMEM106A-208ENST00000612339 BIVM-ERCC5R4GMW8 1640 aa12.96□□□□□ -0.33
TMEM106A-208ENST00000612339 ANP32CO43423 234 aa12.95□□□□□ -0.34
TMEM106A-208ENST00000612339 PRKCSHP14314 528 aaPredicted RBP12.94□□□□□ -0.34
TMEM106A-208ENST00000612339 CDK11AQ9UQ88 783 aaPredicted RBP12.94□□□□□ -0.34
TMEM106A-208ENST00000612339 PLPPR3Q6T4P5 718 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms