Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB6Q9Y5F9 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB6Q9Y5F9 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDHGB6Q9Y5F9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDHGB6Q9Y5F9 AC243732.1-201ENST00000612648 864 ntBASIC19.27■□□□□ 0.68
PCDHGB6Q9Y5F9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB6Q9Y5F9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHGB6Q9Y5F9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.27■□□□□ 0.67
PCDHGB6Q9Y5F9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
PCDHGB6Q9Y5F9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHGB6Q9Y5F9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB6Q9Y5F9 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PCDHGB6Q9Y5F9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB6Q9Y5F9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PCDHGB6Q9Y5F9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PCDHGB6Q9Y5F9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHGB6Q9Y5F9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB6Q9Y5F9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PCDHGB6Q9Y5F9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGB6Q9Y5F9 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB6Q9Y5F9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGB6Q9Y5F9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGB6Q9Y5F9 CD99P1-205ENST00000527459 561 ntBASIC19.26■□□□□ 0.67
PCDHGB6Q9Y5F9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB6Q9Y5F9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB6Q9Y5F9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB6Q9Y5F9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB6Q9Y5F9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
PCDHGB6Q9Y5F9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB6Q9Y5F9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGB6Q9Y5F9 ABHD17AP1-201ENST00000358206 933 ntBASIC19.25■□□□□ 0.67
PCDHGB6Q9Y5F9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB6Q9Y5F9 CYP2T1P-201ENST00000432607 1285 ntBASIC19.25■□□□□ 0.67
PCDHGB6Q9Y5F9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PCDHGB6Q9Y5F9 KRT18P6-201ENST00000555540 1265 ntBASIC19.25■□□□□ 0.67
PCDHGB6Q9Y5F9 AL138781.1-201ENST00000566567 1274 ntBASIC19.25■□□□□ 0.67
PCDHGB6Q9Y5F9 MIR4758-201ENST00000577688 71 ntBASIC19.25■□□□□ 0.67
PCDHGB6Q9Y5F9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
PCDHGB6Q9Y5F9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB6Q9Y5F9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHGB6Q9Y5F9 AC069236.1-201ENST00000604339 616 ntBASIC19.25■□□□□ 0.67
PCDHGB6Q9Y5F9 AC008694.1-202ENST00000636953 945 ntBASIC19.25■□□□□ 0.67
PCDHGB6Q9Y5F9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB6Q9Y5F9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGB6Q9Y5F9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB6Q9Y5F9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB6Q9Y5F9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCDHGB6Q9Y5F9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCDHGB6Q9Y5F9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB6Q9Y5F9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PCDHGB6Q9Y5F9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB6Q9Y5F9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB6Q9Y5F9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGB6Q9Y5F9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB6Q9Y5F9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB6Q9Y5F9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB6Q9Y5F9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGB6Q9Y5F9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGB6Q9Y5F9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB6Q9Y5F9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PCDHGB6Q9Y5F9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGB6Q9Y5F9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
PCDHGB6Q9Y5F9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB6Q9Y5F9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB6Q9Y5F9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
PCDHGB6Q9Y5F9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGB6Q9Y5F9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB6Q9Y5F9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGB6Q9Y5F9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB6Q9Y5F9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB6Q9Y5F9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB6Q9Y5F9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB6Q9Y5F9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB6Q9Y5F9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGB6Q9Y5F9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB6Q9Y5F9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB6Q9Y5F9 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB6Q9Y5F9 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.23■□□□□ 0.67
PCDHGB6Q9Y5F9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGB6Q9Y5F9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.23■□□□□ 0.67
PCDHGB6Q9Y5F9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PCDHGB6Q9Y5F9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGB6Q9Y5F9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB6Q9Y5F9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PCDHGB6Q9Y5F9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB6Q9Y5F9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB6Q9Y5F9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB6Q9Y5F9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms