Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCKAP1Q9Y2A7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCKAP1Q9Y2A7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCKAP1Q9Y2A7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCKAP1Q9Y2A7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCKAP1Q9Y2A7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCKAP1Q9Y2A7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.53■□□□□ 0.88
NCKAP1Q9Y2A7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.53■□□□□ 0.88
NCKAP1Q9Y2A7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.53■□□□□ 0.88
NCKAP1Q9Y2A7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
NCKAP1Q9Y2A7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
NCKAP1Q9Y2A7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCKAP1Q9Y2A7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCKAP1Q9Y2A7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCKAP1Q9Y2A7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.53■□□□□ 0.88
NCKAP1Q9Y2A7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.53■□□□□ 0.88
NCKAP1Q9Y2A7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.53■□□□□ 0.88
NCKAP1Q9Y2A7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
NCKAP1Q9Y2A7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.53■□□□□ 0.88
NCKAP1Q9Y2A7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.53■□□□□ 0.88
NCKAP1Q9Y2A7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NCKAP1Q9Y2A7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCKAP1Q9Y2A7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCKAP1Q9Y2A7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NCKAP1Q9Y2A7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
NCKAP1Q9Y2A7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCKAP1Q9Y2A7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NCKAP1Q9Y2A7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.52■□□□□ 0.88
NCKAP1Q9Y2A7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NCKAP1Q9Y2A7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
NCKAP1Q9Y2A7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NCKAP1Q9Y2A7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.52■□□□□ 0.88
NCKAP1Q9Y2A7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCKAP1Q9Y2A7 UBE2SP1-201ENST00000450587 669 ntBASIC20.52■□□□□ 0.88
NCKAP1Q9Y2A7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.52■□□□□ 0.88
NCKAP1Q9Y2A7 FAM197Y4-202ENST00000622692 608 ntBASIC20.52■□□□□ 0.88
NCKAP1Q9Y2A7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCKAP1Q9Y2A7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
NCKAP1Q9Y2A7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NCKAP1Q9Y2A7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
NCKAP1Q9Y2A7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
NCKAP1Q9Y2A7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NCKAP1Q9Y2A7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NCKAP1Q9Y2A7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NCKAP1Q9Y2A7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NCKAP1Q9Y2A7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NCKAP1Q9Y2A7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.51■□□□□ 0.87
NCKAP1Q9Y2A7 AL356652.1-201ENST00000615962 565 ntBASIC20.51■□□□□ 0.87
NCKAP1Q9Y2A7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.51■□□□□ 0.87
NCKAP1Q9Y2A7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
NCKAP1Q9Y2A7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NCKAP1Q9Y2A7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.51■□□□□ 0.87
NCKAP1Q9Y2A7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.5■□□□□ 0.87
NCKAP1Q9Y2A7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NCKAP1Q9Y2A7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
NCKAP1Q9Y2A7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.5■□□□□ 0.87
NCKAP1Q9Y2A7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NCKAP1Q9Y2A7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.5■□□□□ 0.87
NCKAP1Q9Y2A7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.5■□□□□ 0.87
NCKAP1Q9Y2A7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
NCKAP1Q9Y2A7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
NCKAP1Q9Y2A7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NCKAP1Q9Y2A7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.5■□□□□ 0.87
NCKAP1Q9Y2A7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCKAP1Q9Y2A7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCKAP1Q9Y2A7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.5■□□□□ 0.87
NCKAP1Q9Y2A7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCKAP1Q9Y2A7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.5■□□□□ 0.87
NCKAP1Q9Y2A7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
NCKAP1Q9Y2A7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NCKAP1Q9Y2A7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCKAP1Q9Y2A7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NCKAP1Q9Y2A7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.49■□□□□ 0.87
NCKAP1Q9Y2A7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCKAP1Q9Y2A7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
NCKAP1Q9Y2A7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCKAP1Q9Y2A7 RPS2P4-201ENST00000476944 856 ntBASIC20.49■□□□□ 0.87
NCKAP1Q9Y2A7 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.49■□□□□ 0.87
NCKAP1Q9Y2A7 C1QBPP2-201ENST00000528754 825 ntBASIC20.49■□□□□ 0.87
NCKAP1Q9Y2A7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.49■□□□□ 0.87
NCKAP1Q9Y2A7 AL359736.2-201ENST00000621992 437 ntBASIC20.49■□□□□ 0.87
NCKAP1Q9Y2A7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
NCKAP1Q9Y2A7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCKAP1Q9Y2A7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NCKAP1Q9Y2A7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCKAP1Q9Y2A7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCKAP1Q9Y2A7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.49■□□□□ 0.87
NCKAP1Q9Y2A7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCKAP1Q9Y2A7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.49■□□□□ 0.87
NCKAP1Q9Y2A7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCKAP1Q9Y2A7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NCKAP1Q9Y2A7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCKAP1Q9Y2A7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCKAP1Q9Y2A7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.48■□□□□ 0.87
NCKAP1Q9Y2A7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.48■□□□□ 0.87
NCKAP1Q9Y2A7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCKAP1Q9Y2A7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.48■□□□□ 0.87
NCKAP1Q9Y2A7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCKAP1Q9Y2A7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCKAP1Q9Y2A7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms