Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDPF1Q6NVV7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC15.51■□□□□ 0.07
CDPF1Q6NVV7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDPF1Q6NVV7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDPF1Q6NVV7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 AL512408.1-201ENST00000569378 2000 ntBASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 OXCT2P1-201ENST00000447263 1535 ntBASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDPF1Q6NVV7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 TSPY9P-201ENST00000440215 945 ntBASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 TSPY11P-201ENST00000442607 1045 ntBASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 AC092028.1-203ENST00000608262 953 ntBASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 AC005332.7-201ENST00000614046 2005 ntBASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 AL049796.1-201ENST00000565336 1766 ntBASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDPF1Q6NVV7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CDPF1Q6NVV7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.48■□□□□ 0.07
CDPF1Q6NVV7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDPF1Q6NVV7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDPF1Q6NVV7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDPF1Q6NVV7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
CDPF1Q6NVV7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.48■□□□□ 0.07
CDPF1Q6NVV7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDPF1Q6NVV7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CDPF1Q6NVV7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC15.48■□□□□ 0.07
CDPF1Q6NVV7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC15.48■□□□□ 0.07
CDPF1Q6NVV7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDPF1Q6NVV7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.48■□□□□ 0.07
CDPF1Q6NVV7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDPF1Q6NVV7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC15.48■□□□□ 0.07
CDPF1Q6NVV7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDPF1Q6NVV7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDPF1Q6NVV7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC15.48■□□□□ 0.07
CDPF1Q6NVV7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDPF1Q6NVV7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDPF1Q6NVV7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.48■□□□□ 0.07
CDPF1Q6NVV7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
CDPF1Q6NVV7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDPF1Q6NVV7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDPF1Q6NVV7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC15.47■□□□□ 0.07
CDPF1Q6NVV7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.47■□□□□ 0.07
CDPF1Q6NVV7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDPF1Q6NVV7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDPF1Q6NVV7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC15.47■□□□□ 0.07
CDPF1Q6NVV7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDPF1Q6NVV7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms