Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RPL39P62891 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPL39P62891 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RPL39P62891 RARRES2P1-201ENST00000474487 481 ntBASIC14.44□□□□□ -0.1
RPL39P62891 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC14.44□□□□□ -0.1
RPL39P62891 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPL39P62891 SMUG1P1-201ENST00000590640 811 ntBASIC14.44□□□□□ -0.1
RPL39P62891 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.44□□□□□ -0.1
RPL39P62891 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RPL39P62891 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL39P62891 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL39P62891 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RPL39P62891 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL39P62891 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.44□□□□□ -0.1
RPL39P62891 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.44□□□□□ -0.1
RPL39P62891 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL39P62891 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL39P62891 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL39P62891 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
RPL39P62891 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL39P62891 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
RPL39P62891 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC14.44□□□□□ -0.1
RPL39P62891 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPL39P62891 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPL39P62891 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPL39P62891 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPL39P62891 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPL39P62891 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPL39P62891 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.43□□□□□ -0.1
RPL39P62891 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPL39P62891 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPL39P62891 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RPL39P62891 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPL39P62891 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPL39P62891 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RPL39P62891 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPL39P62891 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RPL39P62891 SERBP1P1-201ENST00000396021 1160 ntBASIC14.43□□□□□ -0.1
RPL39P62891 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPL39P62891 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPL39P62891 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC14.43□□□□□ -0.1
RPL39P62891 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPL39P62891 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPL39P62891 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPL39P62891 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RPL39P62891 AL158211.5-201ENST00000623583 2518 ntBASIC14.43□□□□□ -0.1
RPL39P62891 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPL39P62891 SYT6-210ENST00000641643 1587 ntBASIC14.43□□□□□ -0.1
RPL39P62891 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPL39P62891 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPL39P62891 AC011484.1-201ENST00000377652 1995 ntBASIC14.42□□□□□ -0.1
RPL39P62891 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPL39P62891 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPL39P62891 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPL39P62891 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPL39P62891 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPL39P62891 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC14.42□□□□□ -0.1
RPL39P62891 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPL39P62891 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPL39P62891 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPL39P62891 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPL39P62891 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RPL39P62891 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC14.42□□□□□ -0.1
RPL39P62891 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPL39P62891 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.42□□□□□ -0.1
RPL39P62891 AC092720.2-201ENST00000602388 1665 ntBASIC14.42□□□□□ -0.1
RPL39P62891 EXOC3-AS1-202ENST00000623673 1663 ntBASIC14.42□□□□□ -0.1
RPL39P62891 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.42□□□□□ -0.1
RPL39P62891 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RPL39P62891 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RPL39P62891 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPL39P62891 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPL39P62891 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.41□□□□□ -0.1
RPL39P62891 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC14.41□□□□□ -0.1
RPL39P62891 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPL39P62891 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RPL39P62891 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPL39P62891 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPL39P62891 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.41□□□□□ -0.1
RPL39P62891 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RPL39P62891 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPL39P62891 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPL39P62891 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPL39P62891 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPL39P62891 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RPL39P62891 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC14.41□□□□□ -0.1
RPL39P62891 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPL39P62891 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC14.41□□□□□ -0.1
RPL39P62891 MIR3621-201ENST00000580529 85 ntBASIC14.41□□□□□ -0.1
RPL39P62891 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
RPL39P62891 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RPL39P62891 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.41□□□□□ -0.1
RPL39P62891 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC14.41□□□□□ -0.1
RPL39P62891 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.41□□□□□ -0.1
RPL39P62891 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPL39P62891 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPL39P62891 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.41□□□□□ -0.1
RPL39P62891 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
RPL39P62891 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPL39P62891 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms