Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GTF2A1P52655 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
GTF2A1P52655 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GTF2A1P52655 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GTF2A1P52655 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GTF2A1P52655 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GTF2A1P52655 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GTF2A1P52655 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GTF2A1P52655 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GTF2A1P52655 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.04■□□□□ 0.8
GTF2A1P52655 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.04■□□□□ 0.8
GTF2A1P52655 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GTF2A1P52655 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
GTF2A1P52655 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GTF2A1P52655 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
GTF2A1P52655 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
GTF2A1P52655 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GTF2A1P52655 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
GTF2A1P52655 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GTF2A1P52655 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GTF2A1P52655 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GTF2A1P52655 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GTF2A1P52655 PRORSD1P-202ENST00000563365 2154 ntBASIC20.03■□□□□ 0.8
GTF2A1P52655 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GTF2A1P52655 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
GTF2A1P52655 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GTF2A1P52655 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GTF2A1P52655 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GTF2A1P52655 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GTF2A1P52655 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC20.03■□□□□ 0.8
GTF2A1P52655 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.03■□□□□ 0.8
GTF2A1P52655 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GTF2A1P52655 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GTF2A1P52655 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.03■□□□□ 0.8
GTF2A1P52655 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GTF2A1P52655 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GTF2A1P52655 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GTF2A1P52655 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GTF2A1P52655 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GTF2A1P52655 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GTF2A1P52655 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
GTF2A1P52655 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GTF2A1P52655 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.02■□□□□ 0.8
GTF2A1P52655 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.02■□□□□ 0.8
GTF2A1P52655 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GTF2A1P52655 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GTF2A1P52655 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
GTF2A1P52655 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
GTF2A1P52655 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GTF2A1P52655 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.02■□□□□ 0.8
GTF2A1P52655 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GTF2A1P52655 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
GTF2A1P52655 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.02■□□□□ 0.8
GTF2A1P52655 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
GTF2A1P52655 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
GTF2A1P52655 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
GTF2A1P52655 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
GTF2A1P52655 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
GTF2A1P52655 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
GTF2A1P52655 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GTF2A1P52655 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
GTF2A1P52655 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
GTF2A1P52655 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GTF2A1P52655 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GTF2A1P52655 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.01■□□□□ 0.79
GTF2A1P52655 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GTF2A1P52655 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
GTF2A1P52655 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GTF2A1P52655 AL592295.1-201ENST00000400984 884 ntBASIC20.01■□□□□ 0.79
GTF2A1P52655 SPCS2P3-201ENST00000500401 656 ntBASIC20.01■□□□□ 0.79
GTF2A1P52655 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.01■□□□□ 0.79
GTF2A1P52655 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
GTF2A1P52655 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
GTF2A1P52655 AL022069.1-201ENST00000568025 1636 ntBASIC20.01■□□□□ 0.79
GTF2A1P52655 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.01■□□□□ 0.79
GTF2A1P52655 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GTF2A1P52655 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.01■□□□□ 0.79
GTF2A1P52655 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
GTF2A1P52655 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GTF2A1P52655 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.01■□□□□ 0.79
GTF2A1P52655 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GTF2A1P52655 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
GTF2A1P52655 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.01■□□□□ 0.79
GTF2A1P52655 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20■□□□□ 0.79
GTF2A1P52655 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
GTF2A1P52655 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GTF2A1P52655 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GTF2A1P52655 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20■□□□□ 0.79
GTF2A1P52655 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20■□□□□ 0.79
GTF2A1P52655 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GTF2A1P52655 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20■□□□□ 0.79
GTF2A1P52655 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20■□□□□ 0.79
GTF2A1P52655 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GTF2A1P52655 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GTF2A1P52655 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GTF2A1P52655 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20■□□□□ 0.79
GTF2A1P52655 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20■□□□□ 0.79
GTF2A1P52655 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
GTF2A1P52655 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GTF2A1P52655 AL356309.3-201ENST00000624132 1934 ntBASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms