Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeastyeast

Known RBP Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM5P40089 REV1YOR346W 2958 nt2.37□□□□□ -2.03
LSM5P40089 BRO1YPL084W 2535 nt2.37□□□□□ -2.03
LSM5P40089 NCL1YBL024W 2055 nt2.37□□□□□ -2.03
LSM5P40089 PRK1YIL095W 2433 nt2.37□□□□□ -2.03
LSM5P40089 CRD1YDL142C 852 nt2.37□□□□□ -2.03
LSM5P40089 AAD16YFL057C 459 nt2.37□□□□□ -2.03
LSM5P40089 TPM2YIL138C 486 nt2.37□□□□□ -2.03
LSM5P40089 UTP30YKR060W 825 nt2.37□□□□□ -2.03
LSM5P40089 RPS17AYML024W 411 nt2.37□□□□□ -2.03
LSM5P40089 RAV1YJR033C 4074 nt2.37□□□□□ -2.03
LSM5P40089 VTC3YPL019C 2508 nt2.36□□□□□ -2.03
LSM5P40089 COG2YGR120C 789 nt2.36□□□□□ -2.03
LSM5P40089 YIL156W-BYIL156W-B 222 nt2.36□□□□□ -2.03
LSM5P40089 PSY1YKL076C 384 nt2.36□□□□□ -2.03
LSM5P40089 LCL2YLR104W 396 nt2.36□□□□□ -2.03
LSM5P40089 YHC1YLR298C 696 nt2.36□□□□□ -2.03
LSM5P40089 YLR458WYLR458W 381 nt2.36□□□□□ -2.03
LSM5P40089 YBL108WYBL108W 306 nt2.36□□□□□ -2.03
LSM5P40089 TRS20YBR254C 528 nt2.36□□□□□ -2.03
LSM5P40089 ARP8YOR141C 2646 nt2.36□□□□□ -2.03
LSM5P40089 SGS1YMR190C 4344 nt2.36□□□□□ -2.03
LSM5P40089 SPF1YEL031W 3648 nt2.35□□□□□ -2.03
LSM5P40089 IRA2YOL081W 9240 nt2.35□□□□□ -2.03
LSM5P40089 CLN3YAL040C 1743 nt2.35□□□□□ -2.03
LSM5P40089 CDC50YCR094W 1176 nt2.35□□□□□ -2.03
LSM5P40089 YDR029WYDR029W 315 nt2.35□□□□□ -2.03
LSM5P40089 UBC5YDR059C 447 nt2.35□□□□□ -2.03
LSM5P40089 RTR2YDR066C 591 nt2.35□□□□□ -2.03
LSM5P40089 YIL030W-AYIL030W-A 339 nt2.35□□□□□ -2.03
LSM5P40089 PEP8YJL053W 1140 nt2.35□□□□□ -2.03
LSM5P40089 SPC1YJR010C-A 285 nt2.35□□□□□ -2.03
LSM5P40089 YLR379WYLR379W 375 nt2.35□□□□□ -2.03
LSM5P40089 SWS2YNL081C 432 nt2.35□□□□□ -2.03
LSM5P40089 YOR343W-AYOR343W-A 1317 nt2.35□□□□□ -2.03
LSM5P40089 GIP3YPL137C 3831 nt2.34□□□□□ -2.03
LSM5P40089 YDL025W-AYDL025W-A 105 nt2.34□□□□□ -2.03
LSM5P40089 snR84snR84 550 nt2.34□□□□□ -2.03
LSM5P40089 EMC4YGL231C 573 nt2.34□□□□□ -2.03
LSM5P40089 VTI1YMR197C 654 nt2.34□□□□□ -2.03
LSM5P40089 YNL010WYNL010W 726 nt2.34□□□□□ -2.03
LSM5P40089 YOR105WYOR105W 327 nt2.34□□□□□ -2.03
LSM5P40089 RSA1YPL193W 1146 nt2.34□□□□□ -2.03
LSM5P40089 YBR209WYBR209W 318 nt2.34□□□□□ -2.03
LSM5P40089 KAP123YER110C 3342 nt2.34□□□□□ -2.03
LSM5P40089 UBR1YGR184C 5853 nt2.34□□□□□ -2.04
LSM5P40089 SPR3YGR059W 1539 nt2.33□□□□□ -2.04
LSM5P40089 YER079C-AYER079C-A 339 nt2.33□□□□□ -2.04
LSM5P40089 RNR4YGR180C 1038 nt2.33□□□□□ -2.04
LSM5P40089 TIM10YHR005C-A 282 nt2.33□□□□□ -2.04
LSM5P40089 YLR154W-AYLR154W-A 186 nt2.33□□□□□ -2.04
LSM5P40089 YMR194C-AYMR194C-A 225 nt2.33□□□□□ -2.04
LSM5P40089 TMN3YER113C 2121 nt2.33□□□□□ -2.04
LSM5P40089 SOK2YMR016C 2358 nt2.32□□□□□ -2.04
LSM5P40089 CMS1YLR003C 876 nt2.32□□□□□ -2.04
LSM5P40089 BER1YLR412W 825 nt2.32□□□□□ -2.04
LSM5P40089 URA10YMR271C 684 nt2.32□□□□□ -2.04
LSM5P40089 MLH1YMR167W 2310 nt2.32□□□□□ -2.04
LSM5P40089 UTP13YLR222C 2454 nt2.32□□□□□ -2.04
LSM5P40089 NIC96YFR002W 2520 nt2.32□□□□□ -2.04
LSM5P40089 VPH1YOR270C 2523 nt2.32□□□□□ -2.04
LSM5P40089 MDM32YOR147W 1869 nt2.31□□□□□ -2.04
LSM5P40089 AFI1YOR129C 2682 nt2.31□□□□□ -2.04
LSM5P40089 SCP160YJL080C 3669 nt2.31□□□□□ -2.04
LSM5P40089 MET32YDR253C 576 nt2.31□□□□□ -2.04
LSM5P40089 MZM1YDR493W 372 nt2.31□□□□□ -2.04
LSM5P40089 YLR271WYLR271W 825 nt2.31□□□□□ -2.04
LSM5P40089 KTI11YBL071W-A 249 nt2.31□□□□□ -2.04
LSM5P40089 YPK1YKL126W 2043 nt2.3□□□□□ -2.04
LSM5P40089 STE11YLR362W 2154 nt2.3□□□□□ -2.04
LSM5P40089 YCR064CYCR064C 411 nt2.3□□□□□ -2.04
LSM5P40089 PAU14YIL176C 363 nt2.3□□□□□ -2.04
LSM5P40089 PAU1YJL223C 363 nt2.3□□□□□ -2.04
LSM5P40089 ILM1YJR118C 612 nt2.3□□□□□ -2.04
LSM5P40089 RLP24YLR009W 600 nt2.3□□□□□ -2.04
LSM5P40089 CCW14YLR390W-A 717 nt2.3□□□□□ -2.04
LSM5P40089 YPR153WYPR153W 423 nt2.3□□□□□ -2.04
LSM5P40089 MSB1YOR188W 3414 nt2.3□□□□□ -2.04
LSM5P40089 YGR293CYGR293C 462 nt2.29□□□□□ -2.04
LSM5P40089 RPL40AYIL148W 387 nt2.29□□□□□ -2.04
LSM5P40089 SNC1YAL030W 354 nt2.29□□□□□ -2.04
LSM5P40089 YLR154W-EYLR154W-E 204 nt2.29□□□□□ -2.04
LSM5P40089 CSI1YMR025W 888 nt2.29□□□□□ -2.04
LSM5P40089 RPB11YOL005C 363 nt2.29□□□□□ -2.04
LSM5P40089 ATX2YOR079C 942 nt2.29□□□□□ -2.04
LSM5P40089 ARF3YOR094W 552 nt2.29□□□□□ -2.04
LSM5P40089 YBR071WYBR071W 636 nt2.29□□□□□ -2.04
LSM5P40089 JID1YPR061C 906 nt2.29□□□□□ -2.04
LSM5P40089 YDR220CYDR220C 294 nt2.28□□□□□ -2.04
LSM5P40089 BNA7YDR428C 786 nt2.28□□□□□ -2.04
LSM5P40089 PRM8YGL053W 714 nt2.28□□□□□ -2.04
LSM5P40089 BET3YKR068C 582 nt2.28□□□□□ -2.04
LSM5P40089 YPL197CYPL197C 414 nt2.28□□□□□ -2.04
LSM5P40089 YJL181WYJL181W 1836 nt2.28□□□□□ -2.04
LSM5P40089 TRL1YJL087C 2484 nt2.28□□□□□ -2.04
LSM5P40089 SVL3YPL032C 2478 nt2.28□□□□□ -2.04
LSM5P40089 SPE1YKL184W 1401 nt2.27□□□□□ -2.05
LSM5P40089 RTT101YJL047C 2529 nt2.27□□□□□ -2.05
LSM5P40089 YDR210W-AYDR210W-A 1317 nt2.27□□□□□ -2.05
LSM5P40089 SMC6YLR383W 3345 nt2.27□□□□□ -2.05
LSM5P40089 YDR194W-AYDR194W-A 153 nt2.27□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 18.4 ms