Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 MIR20A-201ENST00000362279 71 ntBASIC-1.21□□□□□ -2.67e-7■■■■□ 25.3
RPS3P23396 PPIA-210ENST00000620047 827 ntTSL 5 BASIC13.24□□□□□ -0.292e-7■■■■□ 25.3
RPS3P23396 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC13.24□□□□□ -0.292e-7■■■■□ 25.3
RPS3P23396 PPIA-208ENST00000489459 907 ntTSL 2 BASIC13.24□□□□□ -0.292e-7■■■■□ 25.3
RPS3P23396 PPIA-205ENST00000479021 552 ntTSL 410.45□□□□□ -0.742e-7■■■■□ 25.3
RPS3P23396 KPNA2-201ENST00000330459 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.883e-7■■■■□ 25.3
RPS3P23396 PPIA-202ENST00000415933 863 ntTSL 28.59□□□□□ -1.032e-7■■■■□ 25.3
RPS3P23396 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.22e-7■■■■□ 25.3
RPS3P23396 PPIA-207ENST00000481437 570 ntTSL 25.92□□□□□ -1.462e-7■■■■□ 25.3
RPS3P23396 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.73□□□□□ -1.492e-7■■■■□ 25.3
RPS3P23396 C2-213ENST00000484636 542 ntTSL 413.09□□□□□ -0.313e-7■■■■□ 25.3
RPS3P23396 PSMA1-211ENST00000531156 574 ntTSL 48.86□□□□□ -0.994e-8■■■■□ 25.3
RPS3P23396 P4HA2-209ENST00000417528 1023 ntTSL 316.74■□□□□ 0.271e-6■■■■□ 25.3
RPS3P23396 P4HA2-206ENST00000395164 568 ntTSL 412.05□□□□□ -0.481e-6■■■■□ 25.3
RPS3P23396 P4HA2-213ENST00000431054 724 ntTSL 411.58□□□□□ -0.561e-6■■■■□ 25.3
RPS3P23396 P4HA2-214ENST00000439698 866 ntTSL 510.72□□□□□ -0.691e-6■■■■□ 25.3
RPS3P23396 TTR-202ENST00000432547 745 ntTSL 26.08□□□□□ -1.444e-9■■■■□ 25.2
RPS3P23396 GANAB-204ENST00000525994 390 ntTSL 415.19■□□□□ 0.025e-9■■■■□ 25.2
RPS3P23396 CCT3-205ENST00000368261 863 ntTSL 510.84□□□□□ -0.673e-11■■■■□ 25.2
RPS3P23396 SERPINH1-209ENST00000528760 773 ntTSL 217.74■□□□□ 0.433e-8■■■■□ 25.2
RPS3P23396 SEC13-207ENST00000397105 883 ntTSL 220.46■□□□□ 0.871e-8■■■■□ 25.2
RPS3P23396 PPP4C-211ENST00000567642 658 ntTSL 220.15■□□□□ 0.822e-10■■■■□ 25.2
RPS3P23396 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.414e-8■■■■□ 25.2
RPS3P23396 MRPS5-202ENST00000345084 1359 ntTSL 211.66□□□□□ -0.544e-8■■■■□ 25.2
RPS3P23396 MRPS5-203ENST00000461916 793 ntTSL 210.32□□□□□ -0.764e-8■■■■□ 25.2
RPS3P23396 MRPS5-208ENST00000482821 3680 ntTSL 29.08□□□□□ -0.964e-8■■■■□ 25.2
RPS3P23396 TECR-221ENST00000600395 846 ntTSL 322.65■■□□□ 1.226e-7■■■■□ 25.2
RPS3P23396 HSPA8-211ENST00000527983 1509 ntTSL 1 (best)11.5□□□□□ -0.579e-11■■■■□ 25.2
RPS3P23396 HIST1H3J-202ENST00000479986 522 ntTSL 221.35■■□□□ 1.012e-15■■■■□ 25.2
RPS3P23396 MGST3-213ENST00000609263 3101 nt6.03□□□□□ -1.442e-9■■■■□ 25.2
RPS3P23396 MGST3-210ENST00000488688 741 ntTSL 24.53□□□□□ -1.682e-9■■■■□ 25.2
RPS3P23396 HACD3-207ENST00000566074 1658 ntTSL 5 BASIC13.12□□□□□ -0.313e-6■■■■□ 25.2
RPS3P23396 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.47□□□□□ -1.533e-6■■■■□ 25.2
RPS3P23396 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.72□□□□□ -1.653e-6■■■■□ 25.2
RPS3P23396 HACD3-204ENST00000562832 789 ntTSL 53.36□□□□□ -1.873e-6■■■■□ 25.2
RPS3P23396 HSPA8-201ENST00000227378 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.59e-11■■■■□ 25.1
RPS3P23396 HSPA8-207ENST00000526110 1924 ntTSL 5 BASIC11.8□□□□□ -0.529e-11■■■■□ 25.1
RPS3P23396 HSPA8-218ENST00000532636 2306 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.769e-11■■■■□ 25.1
RPS3P23396 TBRG4-208ENST00000478116 641 ntTSL 216.97■□□□□ 0.312e-9■■■■□ 25.1
RPS3P23396 POR-222ENST00000493973 1028 ntTSL 216.59■□□□□ 0.251e-21■■■■□ 25.1
RPS3P23396 TBRG4-211ENST00000482482 486 ntTSL 516.15■□□□□ 0.182e-9■■■■□ 25.1
RPS3P23396 TBRG4-212ENST00000483615 822 ntTSL 313.7□□□□□ -0.222e-9■■■■□ 25.1
RPS3P23396 LOX-202ENST00000503759 1643 ntTSL 219.87■□□□□ 0.771e-12■■■■□ 25.1
RPS3P23396 ARSA-206ENST00000551731 1431 ntTSL 218.61■□□□□ 0.572e-7■■■■□ 25.1
RPS3P23396 LOX-205ENST00000513319 1543 ntTSL 1 (best)3.09□□□□□ -1.911e-12■■■■□ 25.1
RPS3P23396 HSPA8-206ENST00000525624 1048 ntTSL 513.18□□□□□ -0.32e-10■■■■□ 25.1
RPS3P23396 HSPA8-210ENST00000527387 579 ntTSL 412.93□□□□□ -0.342e-10■■■■□ 25.1
RPS3P23396 HSPA8-216ENST00000532167 570 ntTSL 43.79□□□□□ -1.82e-10■■■■□ 25.1
RPS3P23396 HSPA8-205ENST00000525463 583 ntTSL 53.33□□□□□ -1.882e-10■■■■□ 25.1
RPS3P23396 MDH2-206ENST00000461665 551 ntTSL 26.4□□□□□ -1.388e-10■■■■□ 25.1
RPS3P23396 HSPA8-214ENST00000531063 578 ntTSL 22.81□□□□□ -1.961e-19■■■■□ 25.1
RPS3P23396 SCAMP2-209ENST00000567638 678 ntTSL 214.48□□□□□ -0.093e-8■■■■□ 25.1
RPS3P23396 PHGDH-204ENST00000469443 653 ntTSL 217.71■□□□□ 0.434e-28■■■■□ 25.1
RPS3P23396 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.99■□□□□ 0.155e-8■■■■□ 25.1
RPS3P23396 PSMF1-203ENST00000335877 4290 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.835e-8■■■■□ 25.1
RPS3P23396 PSMF1-202ENST00000333082 3686 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.925e-8■■■■□ 25.1
RPS3P23396 PDHB-205ENST00000469827 586 ntTSL 215.12■□□□□ 0.013e-8■■■■□ 25.1
RPS3P23396 PDHB-209ENST00000482894 581 ntTSL 211.59□□□□□ -0.553e-8■■■■□ 25.1
RPS3P23396 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.39■□□□□ 0.535e-19■■■■□ 25.1
RPS3P23396 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.435e-19■■■■□ 25.1
RPS3P23396 RABAC1-206ENST00000600292 653 ntTSL 216.78■□□□□ 0.285e-19■■■■□ 25.1
RPS3P23396 RABAC1-207ENST00000601028 530 ntTSL 214.03□□□□□ -0.165e-19■■■■□ 25.1
RPS3P23396 PHGDH-215ENST00000641371 725 nt9.71□□□□□ -0.865e-8■■■■□ 25.1
RPS3P23396 SEZ6L2-207ENST00000568380 332 ntTSL 411.25□□□□□ -0.614e-9■■■■□ 25
RPS3P23396 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.51■■□□□ 1.673e-6■■■■□ 25
RPS3P23396 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.79■□□□□ 0.123e-6■■■■□ 25
RPS3P23396 CPE-205ENST00000513982 564 ntTSL 47.85□□□□□ -1.157e-18■■■■□ 25
RPS3P23396 BCAP31-206ENST00000442093 793 ntTSL 222.21■■□□□ 1.159e-7■■■■□ 25
RPS3P23396 BCAP31-204ENST00000429550 684 ntTSL 319.85■□□□□ 0.779e-7■■■■□ 25
RPS3P23396 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.65■□□□□ 0.16e-8■■■■□ 25
RPS3P23396 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.016e-8■■■■□ 25
RPS3P23396 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.14□□□□□ -0.155e-8■■■■□ 25
RPS3P23396 TPP1-215ENST00000533371 3536 ntTSL 1 (best) BASIC9.82□□□□□ -0.844e-7■■■■□ 25
RPS3P23396 TPP1-201ENST00000299427 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.864e-7■■■■□ 25
RPS3P23396 PBXIP1-204ENST00000490230 853 ntTSL 518.54■□□□□ 0.561e-6■■■■□ 25
RPS3P23396 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.381e-6■■■■□ 25
RPS3P23396 PBXIP1-206ENST00000498553 777 ntTSL 515.9■□□□□ 0.141e-6■■■■□ 25
RPS3P23396 SLC31A1-202ENST00000496650 475 ntTSL 28.37□□□□□ -1.074e-12■■■■□ 25
RPS3P23396 SEZ6L2-203ENST00000350527 3173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.592e-7■■■■□ 25
RPS3P23396 SEZ6L2-202ENST00000346932 3015 ntTSL 1 (best) BASIC10.63□□□□□ -0.712e-7■■■■□ 25
RPS3P23396 SEZ6L2-209ENST00000617533 3555 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.82e-7■■■■□ 25
RPS3P23396 SEZ6L2-204ENST00000537485 3423 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.82e-7■■■■□ 25
RPS3P23396 SEZ6L2-201ENST00000308713 3801 ntAPPRIS P4 TSL 1 (best) BASIC9.02□□□□□ -0.972e-7■■■■□ 25
RPS3P23396 STT3B-204ENST00000453168 1888 ntTSL 1 (best)25.51■■□□□ 1.673e-14■■■■□ 25
RPS3P23396 BSG-216ENST00000618112 769 ntTSL 214.76□□□□□ -0.051e-19■■■■□ 25
RPS3P23396 SLC2A1-202ENST00000415851 578 ntTSL 218.34■□□□□ 0.539e-40■■■■□ 25
RPS3P23396 HSPA8-209ENST00000526862 504 ntTSL 34.32□□□□□ -1.729e-28■■■■□ 25
RPS3P23396 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.431e-6■■■■□ 25
RPS3P23396 MYL4-208ENST00000572316 850 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.491e-6■■■■□ 25
RPS3P23396 MYL4-201ENST00000354968 907 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.851e-6■■■■□ 25
RPS3P23396 MYL4-206ENST00000571981 920 ntTSL 39.77□□□□□ -0.851e-6■■■■□ 25
RPS3P23396 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.312e-6■■■■□ 25
RPS3P23396 PFDN2-202ENST00000468311 408 ntTSL 222.42■■□□□ 1.182e-6■■■■□ 25
RPS3P23396 DLK1-205ENST00000556051 469 ntTSL 2 BASIC13.34□□□□□ -0.271e-12■■■■□ 24.9
RPS3P23396 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.95□□□□□ -0.181e-6■■■■□ 24.9
RPS3P23396 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.251e-6■■■■□ 24.9
RPS3P23396 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC13.35□□□□□ -0.271e-6■■■■□ 24.9
RPS3P23396 GFI1B-201ENST00000339463 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.661e-6■■■■□ 24.9
RPS3P23396 TM9SF4-206ENST00000479591 566 ntTSL 211.88□□□□□ -0.514e-19■■■■□ 24.9
RPS3P23396 TM9SF4-207ENST00000495749 3023 ntTSL 28.77□□□□□ -1.014e-19■■■■□ 24.9
Retrieved 100 of 24,271 protein–RNA pairs in 166.8 ms