RNA–Protein interactions for RNA: ENST00000566511.5

HACD3-209, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 5 BASIC

Gene HACD3, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-209ENST00000566511 AEBP2Q6ZN18 517 aaPredicted RBP19.06■□□□□ 0.64
HACD3-209ENST00000566511 CHIC1Q5VXU3 224 aa18.67■□□□□ 0.58
HACD3-209ENST00000566511 PHF23Q9BUL5 403 aaPredicted RBP16.36■□□□□ 0.21
HACD3-209ENST00000566511 SENP3Q9H4L4 574 aaPredicted RBP16.26■□□□□ 0.19
HACD3-209ENST00000566511 PLPPR3Q6T4P5 718 aa15.19■□□□□ 0.02
HACD3-209ENST00000566511 FOXD1Q16676 465 aa15.04■□□□□ -0
HACD3-209ENST00000566511 ADRA2BP18089 450 aa14.43□□□□□ -0.1
HACD3-209ENST00000566511 PPP6R1Q9UPN7 881 aa14.43□□□□□ -0.1
HACD3-209ENST00000566511 PIAS4Q8N2W9 510 aaPredicted RBP14.21□□□□□ -0.13
HACD3-209ENST00000566511 MSH5O43196 834 aa13.94□□□□□ -0.18
HACD3-209ENST00000566511 PPP4R3CPQ6ZMV5 832 aa13.35□□□□□ -0.27
HACD3-209ENST00000566511 SCAF1Q9H7N4 1312 aaKnown RBP13.31□□□□□ -0.28
HACD3-209ENST00000566511 MAPK8IP2Q13387 824 aaPredicted RBP13.08□□□□□ -0.32
HACD3-209ENST00000566511 NCBP3Q53F19 620 aaKnown RBP13.05□□□□□ -0.32
HACD3-209ENST00000566511 CNKSR2Q8WXI2 1034 aa13.01□□□□□ -0.33
HACD3-209ENST00000566511 KCNA4P22459 653 aa12.99□□□□□ -0.33
HACD3-209ENST00000566511 DMRT2Q9Y5R5 561 aa12.96□□□□□ -0.34
HACD3-209ENST00000566511 POTEDQ86YR6 584 aa12.86□□□□□ -0.35
HACD3-209ENST00000566511 NPM3O75607 178 aaKnown RBP12.79□□□□□ -0.36
HACD3-209ENST00000566511 RNF216Q9NWF9 866 aaPredicted RBP12.75□□□□□ -0.37
HACD3-209ENST00000566511 HOXD11P31277 338 aaPredicted RBP12.69□□□□□ -0.38
HACD3-209ENST00000566511 DNAJC5BQ9UF47 199 aa12.48□□□□□ -0.41
HACD3-209ENST00000566511 SLC4A1APQ9BWU0 796 aaKnown RBP12.41□□□□□ -0.42
HACD3-209ENST00000566511 DCAF8L1A6NGE4 600 aa12.39□□□□□ -0.43
HACD3-209ENST00000566511 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.1□□□□□ -0.47
HACD3-209ENST00000566511 SLC4A2P04920 1241 aa12.07□□□□□ -0.48
HACD3-209ENST00000566511 FOXD4L1Q9NU39 408 aa12.02□□□□□ -0.49
HACD3-209ENST00000566511 EHMT2Q96KQ7 1210 aa12□□□□□ -0.49
HACD3-209ENST00000566511 ZBTB22O15209 634 aa11.93□□□□□ -0.5
HACD3-209ENST00000566511 RNF39Q9H2S5 420 aa11.91□□□□□ -0.5
HACD3-209ENST00000566511 CSRNP3Q8WYN3 585 aa11.87□□□□□ -0.51
HACD3-209ENST00000566511 U3KPZ7 1027 aaPredicted RBP11.87□□□□□ -0.51
HACD3-209ENST00000566511 MYCNP04198 464 aaPredicted RBP11.87□□□□□ -0.51
HACD3-209ENST00000566511 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.81□□□□□ -0.52
HACD3-209ENST00000566511 HNRNPUL2Q1KMD3 747 aaKnown RBP11.81□□□□□ -0.52
HACD3-209ENST00000566511 C1QBPQ07021 282 aaKnown RBP11.8□□□□□ -0.52
HACD3-209ENST00000566511 SAMD1Q6SPF0 538 aaPredicted RBP11.74□□□□□ -0.53
HACD3-209ENST00000566511 APLP2Q06481 763 aa11.71□□□□□ -0.54
HACD3-209ENST00000566511 ATXN8OSP0DMR3 200 aa11.62□□□□□ -0.55
HACD3-209ENST00000566511 CACNB1Q02641 598 aaPredicted RBP11.62□□□□□ -0.55
HACD3-209ENST00000566511 CAPN15O75808 1086 aa11.52□□□□□ -0.57
HACD3-209ENST00000566511 SPINK5Q9NQ38 1064 aaPredicted RBP11.52□□□□□ -0.57
HACD3-209ENST00000566511 ZNF219Q9P2Y4 722 aaPredicted RBP11.5□□□□□ -0.57
HACD3-209ENST00000566511 ATF5Q9Y2D1 282 aaPredicted RBP11.46□□□□□ -0.57
HACD3-209ENST00000566511 TRHP20396 242 aaPredicted RBP11.46□□□□□ -0.58
HACD3-209ENST00000566511 NISCHQ9Y2I1 1504 aa11.39□□□□□ -0.59
HACD3-209ENST00000566511 DSG3P32926 999 aa11.32□□□□□ -0.6
HACD3-209ENST00000566511 ABCB7O75027 752 aa11.28□□□□□ -0.6
HACD3-209ENST00000566511 POLA2Q14181 598 aa11.26□□□□□ -0.61
HACD3-209ENST00000566511 ZBTB12Q9Y330 459 aaPredicted RBP11.15□□□□□ -0.62
HACD3-209ENST00000566511 FBLN2P98095 1184 aa11.08□□□□□ -0.64
HACD3-209ENST00000566511 MKRN4PQ13434 485 aaPredicted RBP10.98□□□□□ -0.65
HACD3-209ENST00000566511 OSCARQ8IYS5 282 aa10.88□□□□□ -0.67
HACD3-209ENST00000566511 RBM42Q9BTD8 480 aaKnown RBP10.85□□□□□ -0.67
HACD3-209ENST00000566511 SPDYE2BA6NHP3 402 aa10.82□□□□□ -0.68
HACD3-209ENST00000566511 SPDYE6P0CI01 402 aa10.82□□□□□ -0.68
HACD3-209ENST00000566511 SPDYE2Q495Y8 402 aa10.82□□□□□ -0.68
HACD3-209ENST00000566511 SPDYE4A6NLX3 237 aa10.77□□□□□ -0.68
HACD3-209ENST00000566511 FKBP8Q14318 412 aa10.75□□□□□ -0.69
HACD3-209ENST00000566511 ZNF692Q9BU19 519 aaPredicted RBP10.75□□□□□ -0.69
HACD3-209ENST00000566511 SSUH2Q9Y2M2 353 aa10.71□□□□□ -0.69
HACD3-209ENST00000566511 AKT1S1Q96B36 256 aa10.69□□□□□ -0.7
HACD3-209ENST00000566511 PABPN1Q86U42 306 aaKnown RBP eCLIP10.6□□□□□ -0.71
HACD3-209ENST00000566511 PROM2Q8N271 834 aa10.59□□□□□ -0.71
HACD3-209ENST00000566511 REM2Q8IYK8 340 aaPredicted RBP10.55□□□□□ -0.72
HACD3-209ENST00000566511 SPDYE1Q8NFV5 336 aaPredicted RBP10.51□□□□□ -0.73
HACD3-209ENST00000566511 STAG3Q9UJ98 1225 aa10.49□□□□□ -0.73
HACD3-209ENST00000566511 FBXO3Q9UK99 471 aa10.44□□□□□ -0.74
HACD3-209ENST00000566511 CLEC11AQ9Y240 323 aa10.43□□□□□ -0.74
HACD3-209ENST00000566511 PITPNM1O00562 1244 aa10.42□□□□□ -0.74
HACD3-209ENST00000566511 CHRDL2Q6WN34 429 aa10.36□□□□□ -0.75
HACD3-209ENST00000566511 PRR29P0C7W0 189 aa10.35□□□□□ -0.75
HACD3-209ENST00000566511 VASPP50552 380 aaPredicted RBP10.25□□□□□ -0.77
HACD3-209ENST00000566511 FXR2P51116 673 aaKnown RBP eCLIP10.25□□□□□ -0.778e-6■□□□□ 10.6
HACD3-209ENST00000566511 PLEKHG5O94827 1062 aa10.24□□□□□ -0.77
HACD3-209ENST00000566511 MIER1Q8N108 512 aa10.22□□□□□ -0.77
HACD3-209ENST00000566511 PLCD3Q8N3E9 789 aa10.22□□□□□ -0.77
HACD3-209ENST00000566511 PIP4P2Q8N4L2 257 aa10.21□□□□□ -0.78
HACD3-209ENST00000566511 CREBZFQ9NS37 354 aa10.19□□□□□ -0.78
HACD3-209ENST00000566511 PRKAR2AP13861 404 aaKnown RBP10.18□□□□□ -0.78
HACD3-209ENST00000566511 ZBTB47Q9UFB7 747 aaPredicted RBP10.16□□□□□ -0.78
HACD3-209ENST00000566511 CHADLQ6NUI6 762 aa10.14□□□□□ -0.79
HACD3-209ENST00000566511 POTEHQ6S545 545 aa10.11□□□□□ -0.79
HACD3-209ENST00000566511 KLHL34Q8N239 644 aa10.09□□□□□ -0.79
HACD3-209ENST00000566511 IFNLR1Q8IU57 520 aaPredicted RBP10.09□□□□□ -0.79
HACD3-209ENST00000566511 FARP1Q9Y4F1 1045 aaPredicted RBP10.09□□□□□ -0.79
HACD3-209ENST00000566511 NPM1P06748 294 aaKnown RBP eCLIP10.08□□□□□ -0.8
HACD3-209ENST00000566511 MNX1P50219 401 aaPredicted RBP10.06□□□□□ -0.8
HACD3-209ENST00000566511 SPOCK2Q92563 424 aa10.01□□□□□ -0.81
HACD3-209ENST00000566511 NUBP1P53384 320 aa9.94□□□□□ -0.82
HACD3-209ENST00000566511 PAK3O75914 559 aaPredicted RBP9.92□□□□□ -0.82
HACD3-209ENST00000566511 FAM212AQ96EL1 285 aa9.91□□□□□ -0.82
HACD3-209ENST00000566511 C19orf67A6NJJ6 358 aa9.9□□□□□ -0.82
HACD3-209ENST00000566511 HAX1O00165 279 aa9.9□□□□□ -0.82
HACD3-209ENST00000566511 CD44P16070 742 aaKnown RBP9.89□□□□□ -0.83
HACD3-209ENST00000566511 RASEFQ8IZ41 740 aa9.89□□□□□ -0.83
HACD3-209ENST00000566511 GSE1Q14687 1217 aa9.88□□□□□ -0.83
HACD3-209ENST00000566511 DCAF8Q5TAQ9 597 aa9.87□□□□□ -0.83
HACD3-209ENST00000566511 TSPYL2Q9H2G4 693 aaPredicted RBP9.86□□□□□ -0.83
HACD3-209ENST00000566511 SHROOM4Q9ULL8 1493 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms