Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LINGO3P0C6S8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
LINGO3P0C6S8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.72■□□□□ 0.75
LINGO3P0C6S8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINGO3P0C6S8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LINGO3P0C6S8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
LINGO3P0C6S8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINGO3P0C6S8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINGO3P0C6S8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINGO3P0C6S8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.71■□□□□ 0.75
LINGO3P0C6S8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINGO3P0C6S8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.71■□□□□ 0.75
LINGO3P0C6S8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.71■□□□□ 0.75
LINGO3P0C6S8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.71■□□□□ 0.75
LINGO3P0C6S8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.71■□□□□ 0.75
LINGO3P0C6S8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINGO3P0C6S8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.71■□□□□ 0.75
LINGO3P0C6S8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LINGO3P0C6S8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINGO3P0C6S8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.71■□□□□ 0.75
LINGO3P0C6S8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINGO3P0C6S8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINGO3P0C6S8 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.71■□□□□ 0.75
LINGO3P0C6S8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LINGO3P0C6S8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.7■□□□□ 0.74
LINGO3P0C6S8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LINGO3P0C6S8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LINGO3P0C6S8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LINGO3P0C6S8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LINGO3P0C6S8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.7■□□□□ 0.74
LINGO3P0C6S8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LINGO3P0C6S8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
LINGO3P0C6S8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.7■□□□□ 0.74
LINGO3P0C6S8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LINGO3P0C6S8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LINGO3P0C6S8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LINGO3P0C6S8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.7■□□□□ 0.74
LINGO3P0C6S8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LINGO3P0C6S8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
LINGO3P0C6S8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.7■□□□□ 0.74
LINGO3P0C6S8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.7■□□□□ 0.74
LINGO3P0C6S8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINGO3P0C6S8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINGO3P0C6S8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINGO3P0C6S8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.69■□□□□ 0.74
LINGO3P0C6S8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINGO3P0C6S8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
LINGO3P0C6S8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINGO3P0C6S8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINGO3P0C6S8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LINGO3P0C6S8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
LINGO3P0C6S8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
LINGO3P0C6S8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
LINGO3P0C6S8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LINGO3P0C6S8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINGO3P0C6S8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LINGO3P0C6S8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINGO3P0C6S8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINGO3P0C6S8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.69■□□□□ 0.74
LINGO3P0C6S8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.69■□□□□ 0.74
LINGO3P0C6S8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINGO3P0C6S8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINGO3P0C6S8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINGO3P0C6S8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.68■□□□□ 0.74
LINGO3P0C6S8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
LINGO3P0C6S8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINGO3P0C6S8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
LINGO3P0C6S8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINGO3P0C6S8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINGO3P0C6S8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.68■□□□□ 0.74
LINGO3P0C6S8 AC105265.2-201ENST00000467189 838 ntBASIC19.68■□□□□ 0.74
LINGO3P0C6S8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.68■□□□□ 0.74
LINGO3P0C6S8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.68■□□□□ 0.74
LINGO3P0C6S8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LINGO3P0C6S8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINGO3P0C6S8 AC007613.1-201ENST00000572811 2597 ntBASIC19.68■□□□□ 0.74
LINGO3P0C6S8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINGO3P0C6S8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.68■□□□□ 0.74
LINGO3P0C6S8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINGO3P0C6S8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINGO3P0C6S8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LINGO3P0C6S8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LINGO3P0C6S8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.67■□□□□ 0.74
LINGO3P0C6S8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINGO3P0C6S8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINGO3P0C6S8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINGO3P0C6S8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.67■□□□□ 0.74
LINGO3P0C6S8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LINGO3P0C6S8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.67■□□□□ 0.74
LINGO3P0C6S8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
LINGO3P0C6S8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINGO3P0C6S8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LINGO3P0C6S8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LINGO3P0C6S8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LINGO3P0C6S8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LINGO3P0C6S8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINGO3P0C6S8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LINGO3P0C6S8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LINGO3P0C6S8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LINGO3P0C6S8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms