Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AL032819.2-201ENST00000624543 2162 ntBASIC15.86■□□□□ 0.13
CXCL1P09341 AC021242.3-201ENST00000607598 1377 ntBASIC15.86■□□□□ 0.13
CXCL1P09341 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CXCL1P09341 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CXCL1P09341 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL1P09341 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL1P09341 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL1P09341 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL1P09341 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.85■□□□□ 0.13
CXCL1P09341 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CXCL1P09341 PCDHB18P-201ENST00000524813 2368 ntBASIC15.85■□□□□ 0.13
CXCL1P09341 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CXCL1P09341 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL1P09341 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.85■□□□□ 0.13
CXCL1P09341 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL1P09341 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CXCL1P09341 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CXCL1P09341 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CXCL1P09341 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL1P09341 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL1P09341 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CXCL1P09341 YBX1P4-201ENST00000392794 808 ntBASIC15.85■□□□□ 0.13
CXCL1P09341 AC103724.3-201ENST00000564481 992 ntBASIC15.85■□□□□ 0.13
CXCL1P09341 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CXCL1P09341 AL499627.2-201ENST00000606283 725 ntBASIC15.85■□□□□ 0.13
CXCL1P09341 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL1P09341 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL1P09341 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL1P09341 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL1P09341 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL1P09341 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CXCL1P09341 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CXCL1P09341 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CXCL1P09341 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC15.85■□□□□ 0.13
CXCL1P09341 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.85■□□□□ 0.13
CXCL1P09341 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL1P09341 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.84■□□□□ 0.13
CXCL1P09341 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL1P09341 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL1P09341 AC009102.2-201ENST00000606772 1639 ntBASIC15.84■□□□□ 0.13
CXCL1P09341 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL1P09341 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.84■□□□□ 0.13
CXCL1P09341 CLTA-206ENST00000466396 695 ntTSL 2 BASIC15.84■□□□□ 0.13
CXCL1P09341 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL1P09341 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
CXCL1P09341 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
CXCL1P09341 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CXCL1P09341 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CXCL1P09341 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CXCL1P09341 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CXCL1P09341 NOC2LP1-202ENST00000452600 2235 ntBASIC15.83■□□□□ 0.13
CXCL1P09341 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC15.83■□□□□ 0.13
CXCL1P09341 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CXCL1P09341 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.83■□□□□ 0.12
CXCL1P09341 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.83■□□□□ 0.12
CXCL1P09341 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
CXCL1P09341 AC103834.1-201ENST00000520383 144 ntBASIC15.83■□□□□ 0.12
CXCL1P09341 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC15.83■□□□□ 0.12
CXCL1P09341 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL1P09341 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CXCL1P09341 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL1P09341 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL1P09341 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL1P09341 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL1P09341 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL1P09341 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL1P09341 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL1P09341 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CXCL1P09341 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL1P09341 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CXCL1P09341 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL1P09341 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL1P09341 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL1P09341 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.82■□□□□ 0.12
CXCL1P09341 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL1P09341 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL1P09341 GUK1-208ENST00000366728 842 ntTSL 2 BASIC15.82■□□□□ 0.12
CXCL1P09341 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CXCL1P09341 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CXCL1P09341 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC15.82■□□□□ 0.12
CXCL1P09341 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CXCL1P09341 BRD4-212ENST00000630599 726 ntTSL 2 BASIC15.82■□□□□ 0.12
CXCL1P09341 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CXCL1P09341 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL1P09341 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC15.82■□□□□ 0.12
CXCL1P09341 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CXCL1P09341 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL1P09341 VGF-203ENST00000611537 1622 ntTSL 5 BASIC15.82■□□□□ 0.12
CXCL1P09341 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
CXCL1P09341 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
CXCL1P09341 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CXCL1P09341 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL1P09341 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL1P09341 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CXCL1P09341 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CXCL1P09341 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL1P09341 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.82■□□□□ 0.12
CXCL1P09341 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL1P09341 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL1P09341 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms