Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLIC3O95833 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC3O95833 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC3O95833 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC3O95833 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC3O95833 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CLIC3O95833 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC3O95833 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC3O95833 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC3O95833 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC3O95833 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.88■□□□□ 0.61
CLIC3O95833 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC3O95833 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC3O95833 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.88■□□□□ 0.61
CLIC3O95833 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.88■□□□□ 0.61
CLIC3O95833 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC3O95833 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CLIC3O95833 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.88■□□□□ 0.61
CLIC3O95833 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC3O95833 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC3O95833 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC3O95833 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
CLIC3O95833 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC3O95833 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CLIC3O95833 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC3O95833 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.88■□□□□ 0.61
CLIC3O95833 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC3O95833 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC3O95833 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CLIC3O95833 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC3O95833 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC3O95833 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC3O95833 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CLIC3O95833 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC3O95833 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC3O95833 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CLIC3O95833 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.87■□□□□ 0.61
CLIC3O95833 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC3O95833 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.87■□□□□ 0.61
CLIC3O95833 AC092720.2-201ENST00000602388 1665 ntBASIC18.87■□□□□ 0.61
CLIC3O95833 BX005040.4-201ENST00000637145 1518 ntBASIC18.87■□□□□ 0.61
CLIC3O95833 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC3O95833 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.87■□□□□ 0.61
CLIC3O95833 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC3O95833 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.87■□□□□ 0.61
CLIC3O95833 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC3O95833 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC3O95833 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC3O95833 AC005332.7-201ENST00000614046 2005 ntBASIC18.86■□□□□ 0.61
CLIC3O95833 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC3O95833 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC3O95833 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC3O95833 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC3O95833 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CLIC3O95833 TSPY9P-201ENST00000440215 945 ntBASIC18.86■□□□□ 0.61
CLIC3O95833 TSPY11P-201ENST00000442607 1045 ntBASIC18.86■□□□□ 0.61
CLIC3O95833 KRT125P-201ENST00000546827 989 ntBASIC18.86■□□□□ 0.61
CLIC3O95833 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC3O95833 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC3O95833 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC3O95833 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC3O95833 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
CLIC3O95833 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.86■□□□□ 0.61
CLIC3O95833 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC3O95833 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.85■□□□□ 0.61
CLIC3O95833 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC3O95833 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.85■□□□□ 0.61
CLIC3O95833 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC3O95833 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC3O95833 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC3O95833 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC3O95833 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.85■□□□□ 0.61
CLIC3O95833 MIR4787-201ENST00000607364 84 ntBASIC18.85■□□□□ 0.61
CLIC3O95833 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC3O95833 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.85■□□□□ 0.61
CLIC3O95833 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.85■□□□□ 0.61
CLIC3O95833 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC3O95833 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC3O95833 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC3O95833 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC3O95833 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.84■□□□□ 0.61
CLIC3O95833 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC3O95833 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CLIC3O95833 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC3O95833 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC3O95833 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CLIC3O95833 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC3O95833 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC3O95833 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC3O95833 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
CLIC3O95833 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
CLIC3O95833 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CLIC3O95833 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.84■□□□□ 0.61
CLIC3O95833 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC3O95833 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.84■□□□□ 0.61
CLIC3O95833 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC3O95833 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
CLIC3O95833 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CLIC3O95833 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC3O95833 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms