Protein–RNA interactions for Protein: O75462

CRLF1, Cytokine receptor-like factor 1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF1O75462 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.6■□□□□ 0.25
CRLF1O75462 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.6■□□□□ 0.25
CRLF1O75462 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF1O75462 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.6■□□□□ 0.25
CRLF1O75462 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.6■□□□□ 0.25
CRLF1O75462 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.6■□□□□ 0.25
CRLF1O75462 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CRLF1O75462 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF1O75462 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF1O75462 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF1O75462 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.6■□□□□ 0.25
CRLF1O75462 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF1O75462 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF1O75462 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF1O75462 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.6■□□□□ 0.25
CRLF1O75462 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF1O75462 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF1O75462 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.59■□□□□ 0.25
CRLF1O75462 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC16.59■□□□□ 0.25
CRLF1O75462 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF1O75462 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF1O75462 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.59■□□□□ 0.25
CRLF1O75462 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF1O75462 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF1O75462 UNC93B2-201ENST00000285383 730 ntBASIC16.59■□□□□ 0.25
CRLF1O75462 TERF1P1-201ENST00000311003 1181 ntBASIC16.59■□□□□ 0.25
CRLF1O75462 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF1O75462 FAM197Y1-201ENST00000421178 764 ntBASIC16.59■□□□□ 0.25
CRLF1O75462 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
CRLF1O75462 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.59■□□□□ 0.25
CRLF1O75462 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.59■□□□□ 0.25
CRLF1O75462 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.59■□□□□ 0.25
CRLF1O75462 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CRLF1O75462 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.59■□□□□ 0.25
CRLF1O75462 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF1O75462 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF1O75462 KRT18P22-201ENST00000402024 1347 ntBASIC16.59■□□□□ 0.25
CRLF1O75462 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.59■□□□□ 0.25
CRLF1O75462 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.59■□□□□ 0.25
CRLF1O75462 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF1O75462 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CRLF1O75462 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CRLF1O75462 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF1O75462 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF1O75462 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CRLF1O75462 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF1O75462 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF1O75462 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF1O75462 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.59■□□□□ 0.25
CRLF1O75462 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF1O75462 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CRLF1O75462 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CRLF1O75462 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CRLF1O75462 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
CRLF1O75462 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CRLF1O75462 CLDN5-201ENST00000403084 2357 ntBASIC16.58■□□□□ 0.25
CRLF1O75462 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CRLF1O75462 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
CRLF1O75462 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CRLF1O75462 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.58■□□□□ 0.24
CRLF1O75462 DUX4L26-201ENST00000489078 1255 ntBASIC16.58■□□□□ 0.24
CRLF1O75462 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.58■□□□□ 0.24
CRLF1O75462 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.58■□□□□ 0.24
CRLF1O75462 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.58■□□□□ 0.24
CRLF1O75462 KRT8P9-201ENST00000558927 1449 ntBASIC16.58■□□□□ 0.24
CRLF1O75462 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CRLF1O75462 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CRLF1O75462 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CRLF1O75462 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CRLF1O75462 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CRLF1O75462 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CRLF1O75462 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CRLF1O75462 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CRLF1O75462 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CRLF1O75462 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.57■□□□□ 0.24
CRLF1O75462 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CRLF1O75462 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CRLF1O75462 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CRLF1O75462 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CRLF1O75462 AC087633.2-202ENST00000565166 1439 ntBASIC16.57■□□□□ 0.24
CRLF1O75462 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CRLF1O75462 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.57■□□□□ 0.24
CRLF1O75462 KRT16P5-201ENST00000455284 522 ntBASIC16.57■□□□□ 0.24
CRLF1O75462 AC073195.1-201ENST00000607241 877 ntBASIC16.57■□□□□ 0.24
CRLF1O75462 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CRLF1O75462 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CRLF1O75462 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CRLF1O75462 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CRLF1O75462 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.56■□□□□ 0.24
CRLF1O75462 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.56■□□□□ 0.24
CRLF1O75462 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CRLF1O75462 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CRLF1O75462 AC079598.2-202ENST00000546624 1451 ntBASIC16.56■□□□□ 0.24
CRLF1O75462 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CRLF1O75462 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CRLF1O75462 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CRLF1O75462 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CRLF1O75462 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.56■□□□□ 0.24
CRLF1O75462 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.56■□□□□ 0.24
CRLF1O75462 NAPSB-206ENST00000562112 1266 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms