Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSX5O60225 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSX5O60225 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.49■□□□□ 0.39
SSX5O60225 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.49■□□□□ 0.39
SSX5O60225 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SSX5O60225 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX5O60225 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX5O60225 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX5O60225 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX5O60225 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSX5O60225 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSX5O60225 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSX5O60225 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX5O60225 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.48■□□□□ 0.39
SSX5O60225 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.48■□□□□ 0.39
SSX5O60225 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SSX5O60225 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.48■□□□□ 0.39
SSX5O60225 AL035685.1-201ENST00000636663 812 ntBASIC17.48■□□□□ 0.39
SSX5O60225 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSX5O60225 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX5O60225 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.48■□□□□ 0.39
SSX5O60225 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SSX5O60225 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX5O60225 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX5O60225 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SSX5O60225 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX5O60225 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSX5O60225 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.47■□□□□ 0.39
SSX5O60225 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSX5O60225 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX5O60225 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SSX5O60225 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX5O60225 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX5O60225 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SSX5O60225 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX5O60225 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX5O60225 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SSX5O60225 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.47■□□□□ 0.39
SSX5O60225 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.47■□□□□ 0.39
SSX5O60225 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.47■□□□□ 0.39
SSX5O60225 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX5O60225 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SSX5O60225 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SSX5O60225 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX5O60225 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX5O60225 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX5O60225 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.47■□□□□ 0.39
SSX5O60225 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.47■□□□□ 0.39
SSX5O60225 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX5O60225 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX5O60225 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.47■□□□□ 0.39
SSX5O60225 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SSX5O60225 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSX5O60225 LETM1P2-201ENST00000597330 2178 ntBASIC17.46■□□□□ 0.39
SSX5O60225 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSX5O60225 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SSX5O60225 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.46■□□□□ 0.39
SSX5O60225 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.46■□□□□ 0.39
SSX5O60225 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSX5O60225 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSX5O60225 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSX5O60225 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.46■□□□□ 0.39
SSX5O60225 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSX5O60225 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSX5O60225 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SSX5O60225 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SSX5O60225 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSX5O60225 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSX5O60225 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SSX5O60225 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSX5O60225 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSX5O60225 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSX5O60225 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.45■□□□□ 0.38
SSX5O60225 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.45■□□□□ 0.38
SSX5O60225 AC009237.3-201ENST00000393279 1427 ntBASIC17.45■□□□□ 0.38
SSX5O60225 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.45■□□□□ 0.38
SSX5O60225 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSX5O60225 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SSX5O60225 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SSX5O60225 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSX5O60225 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSX5O60225 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSX5O60225 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SSX5O60225 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.44■□□□□ 0.38
SSX5O60225 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSX5O60225 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SSX5O60225 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSX5O60225 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.44■□□□□ 0.38
SSX5O60225 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SSX5O60225 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSX5O60225 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSX5O60225 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
SSX5O60225 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.44■□□□□ 0.38
SSX5O60225 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SSX5O60225 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SSX5O60225 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SSX5O60225 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSX5O60225 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSX5O60225 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSX5O60225 AC011484.1-201ENST00000377652 1995 ntBASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms