Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 GABARAPL3-202ENST00000624044 1851 ntBASIC19.07■□□□□ 0.64
AP3D1O14617 AC004854.2-201ENST00000608450 1441 ntBASIC19.07■□□□□ 0.64
AP3D1O14617 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3D1O14617 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.07■□□□□ 0.64
AP3D1O14617 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3D1O14617 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.07■□□□□ 0.64
AP3D1O14617 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
AP3D1O14617 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.07■□□□□ 0.64
AP3D1O14617 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3D1O14617 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3D1O14617 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AP3D1O14617 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.06■□□□□ 0.64
AP3D1O14617 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3D1O14617 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3D1O14617 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.06■□□□□ 0.64
AP3D1O14617 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3D1O14617 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3D1O14617 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.06■□□□□ 0.64
AP3D1O14617 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.06■□□□□ 0.64
AP3D1O14617 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3D1O14617 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.06■□□□□ 0.64
AP3D1O14617 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.06■□□□□ 0.64
AP3D1O14617 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.06■□□□□ 0.64
AP3D1O14617 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.06■□□□□ 0.64
AP3D1O14617 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AP3D1O14617 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AP3D1O14617 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3D1O14617 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP3D1O14617 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.06■□□□□ 0.64
AP3D1O14617 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
AP3D1O14617 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3D1O14617 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.05■□□□□ 0.64
AP3D1O14617 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
AP3D1O14617 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3D1O14617 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
AP3D1O14617 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.05■□□□□ 0.64
AP3D1O14617 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.05■□□□□ 0.64
AP3D1O14617 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
AP3D1O14617 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3D1O14617 AC010141.2-201ENST00000452426 721 ntBASIC19.05■□□□□ 0.64
AP3D1O14617 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.05■□□□□ 0.64
AP3D1O14617 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
AP3D1O14617 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3D1O14617 KRT18P61-201ENST00000585825 1298 ntBASIC19.05■□□□□ 0.64
AP3D1O14617 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
AP3D1O14617 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3D1O14617 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3D1O14617 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP3D1O14617 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.05■□□□□ 0.64
AP3D1O14617 AP005212.1-201ENST00000581547 1997 ntBASIC19.04■□□□□ 0.64
AP3D1O14617 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3D1O14617 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
AP3D1O14617 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3D1O14617 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3D1O14617 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
AP3D1O14617 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3D1O14617 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.04■□□□□ 0.64
AP3D1O14617 POU5F1P4-201ENST00000413175 1085 ntBASIC19.04■□□□□ 0.64
AP3D1O14617 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3D1O14617 DUX4L2-201ENST00000561772 1275 ntBASIC19.04■□□□□ 0.64
AP3D1O14617 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.04■□□□□ 0.64
AP3D1O14617 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3D1O14617 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.04■□□□□ 0.64
AP3D1O14617 DUX4L6-201ENST00000626483 1275 ntBASIC19.04■□□□□ 0.64
AP3D1O14617 DUX4L1-201ENST00000627662 1275 ntBASIC19.04■□□□□ 0.64
AP3D1O14617 DUX4L8-201ENST00000629013 1275 ntBASIC19.04■□□□□ 0.64
AP3D1O14617 DUX4L3-201ENST00000630187 1275 ntBASIC19.04■□□□□ 0.64
AP3D1O14617 DUX4L7-201ENST00000630678 1275 ntBASIC19.04■□□□□ 0.64
AP3D1O14617 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP3D1O14617 DUX4L5-201ENST00000630834 1275 ntBASIC19.04■□□□□ 0.64
AP3D1O14617 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.04■□□□□ 0.64
AP3D1O14617 AC007225.1-201ENST00000566331 1836 ntBASIC19.04■□□□□ 0.64
AP3D1O14617 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3D1O14617 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.04■□□□□ 0.64
AP3D1O14617 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP3D1O14617 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3D1O14617 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP3D1O14617 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
AP3D1O14617 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
AP3D1O14617 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.03■□□□□ 0.64
AP3D1O14617 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.03■□□□□ 0.64
AP3D1O14617 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
AP3D1O14617 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.03■□□□□ 0.64
AP3D1O14617 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.03■□□□□ 0.64
AP3D1O14617 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP3D1O14617 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP3D1O14617 AC073314.1-201ENST00000568729 2216 ntBASIC19.03■□□□□ 0.64
AP3D1O14617 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.03■□□□□ 0.64
AP3D1O14617 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP3D1O14617 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.03■□□□□ 0.64
AP3D1O14617 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
AP3D1O14617 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.03■□□□□ 0.64
AP3D1O14617 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.03■□□□□ 0.64
AP3D1O14617 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.03■□□□□ 0.64
AP3D1O14617 AP001160.3-201ENST00000601484 763 ntBASIC19.03■□□□□ 0.64
AP3D1O14617 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP3D1O14617 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP3D1O14617 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
AP3D1O14617 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
AP3D1O14617 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms