Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 AC026471.6-201ENST00000622954 1905 ntBASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 AC018755.3-202ENST00000596210 929 ntBASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 AL133373.2-201ENST00000623187 2828 ntBASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC11.63□□□□□ -0.55
TRAV22A0A0B4J277 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 AL139384.1-201ENST00000612143 3047 ntBASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
TRAV22A0A0B4J277 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TRAV22A0A0B4J277 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms