Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC137055.1-201ENST00000549333 395 ntBASIC9.46□□□□□ -0.9
SLC1A1P43005 PLCB2-AS1-201ENST00000559520 568 ntTSL 3 BASIC9.46□□□□□ -0.9
SLC1A1P43005 AC087392.2-201ENST00000573877 585 ntTSL 2 BASIC9.46□□□□□ -0.9
SLC1A1P43005 AC133065.3-201ENST00000577174 1161 ntBASIC9.46□□□□□ -0.9
SLC1A1P43005 MIR4253-201ENST00000581187 68 ntBASIC9.46□□□□□ -0.9
SLC1A1P43005 RNF157-207ENST00000592271 755 ntTSL 2 BASIC9.46□□□□□ -0.9
SLC1A1P43005 IGHV1OR15-6-201ENST00000603166 343 ntBASIC9.46□□□□□ -0.9
SLC1A1P43005 C2-AS1-201ENST00000630806 762 ntTSL 2 BASIC9.46□□□□□ -0.9
SLC1A1P43005 MIR3160-2-201ENST00000637870 81 ntBASIC9.46□□□□□ -0.9
SLC1A1P43005 AL445648.1-201ENST00000641176 886 ntBASIC9.46□□□□□ -0.9
SLC1A1P43005 CKAP2-201ENST00000258607 3375 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
SLC1A1P43005 COPB2-201ENST00000333188 3360 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SLC1A1P43005 AL583836.1-201ENST00000464755 2395 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
SLC1A1P43005 MLH1-222ENST00000539477 2366 ntTSL 2 BASIC9.46□□□□□ -0.9
SLC1A1P43005 LAMA3-207ENST00000587184 5007 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SLC1A1P43005 AL049839.2-201ENST00000553947 3067 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
SLC1A1P43005 TOP1-201ENST00000361337 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SLC1A1P43005 SCMH1-205ENST00000372595 3231 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SLC1A1P43005 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SLC1A1P43005 ATXN7L1-201ENST00000318724 1470 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SLC1A1P43005 CD22-201ENST00000085219 3268 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
SLC1A1P43005 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SLC1A1P43005 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC9.46□□□□□ -0.9
SLC1A1P43005 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SLC1A1P43005 BBS9-203ENST00000355070 4004 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.9
SLC1A1P43005 ADAM21P1-201ENST00000529267 2170 ntBASIC9.46□□□□□ -0.9
SLC1A1P43005 DDIAS-211ENST00000533655 3533 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SLC1A1P43005 ZNF611-206ENST00000595798 2395 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SLC1A1P43005 LRRC49-203ENST00000443425 3085 ntTSL 2 BASIC9.45□□□□□ -0.9
SLC1A1P43005 SMC6-207ENST00000448223 5233 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SLC1A1P43005 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SLC1A1P43005 AL449403.2-201ENST00000624497 2662 ntTSL 2 BASIC9.45□□□□□ -0.9
SLC1A1P43005 AC026124.1-201ENST00000545709 3457 ntTSL 5 BASIC9.45□□□□□ -0.9
SLC1A1P43005 NLRP3-204ENST00000366497 4318 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SLC1A1P43005 GABRA1-219ENST00000638112 2818 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
SLC1A1P43005 FCHO2-201ENST00000287761 1287 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SLC1A1P43005 HMHB1-201ENST00000289448 384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SLC1A1P43005 PFDN5-203ENST00000351500 478 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SLC1A1P43005 RNA5SP69-201ENST00000364477 117 ntBASIC9.45□□□□□ -0.9
SLC1A1P43005 ABCA1-201ENST00000374733 923 ntTSL 2 BASIC9.45□□□□□ -0.9
SLC1A1P43005 SET-205ENST00000409104 962 ntTSL 5 BASIC9.45□□□□□ -0.9
SLC1A1P43005 AL022724.1-201ENST00000412132 554 ntTSL 3 BASIC9.45□□□□□ -0.9
SLC1A1P43005 ZNF70P1-201ENST00000417480 624 ntBASIC9.45□□□□□ -0.9
SLC1A1P43005 AL035250.1-201ENST00000424662 593 ntTSL 2 BASIC9.45□□□□□ -0.9
SLC1A1P43005 AL606468.1-201ENST00000444750 510 ntTSL 3 BASIC9.45□□□□□ -0.9
SLC1A1P43005 LINC01696-201ENST00000448988 492 ntTSL 2 BASIC9.45□□□□□ -0.9
SLC1A1P43005 RPL10AP3-201ENST00000462503 651 ntBASIC9.45□□□□□ -0.9
SLC1A1P43005 AC004918.1-201ENST00000467537 770 ntTSL 2 BASIC9.45□□□□□ -0.9
SLC1A1P43005 AC022973.1-201ENST00000490340 575 ntBASIC9.45□□□□□ -0.9
SLC1A1P43005 RPARP-AS1-203ENST00000494270 711 ntTSL 2 BASIC9.45□□□□□ -0.9
SLC1A1P43005 AC022217.3-201ENST00000523005 352 ntTSL 3 BASIC9.45□□□□□ -0.9
SLC1A1P43005 AC068733.1-201ENST00000532430 1288 ntTSL 2 BASIC9.45□□□□□ -0.9
SLC1A1P43005 LINC02454-202ENST00000541391 612 ntTSL 3 BASIC9.45□□□□□ -0.9
SLC1A1P43005 AC073651.2-201ENST00000544148 660 ntBASIC9.45□□□□□ -0.9
SLC1A1P43005 AC009075.1-201ENST00000563347 391 ntTSL 3 BASIC9.45□□□□□ -0.9
SLC1A1P43005 FRG2GP-201ENST00000567870 615 ntBASIC9.45□□□□□ -0.9
SLC1A1P43005 PDLIM1P2-201ENST00000582923 607 ntBASIC9.45□□□□□ -0.9
SLC1A1P43005 AC010615.2-204ENST00000600469 830 ntTSL 3 BASIC9.45□□□□□ -0.9
SLC1A1P43005 AP006545.2-201ENST00000607091 461 ntBASIC9.45□□□□□ -0.9
SLC1A1P43005 uc_338.30-201ENST00000612038 168 ntBASIC9.45□□□□□ -0.9
SLC1A1P43005 PIBF1-207ENST00000615625 1098 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SLC1A1P43005 AC092279.2-201ENST00000623742 2189 ntBASIC9.45□□□□□ -0.9
SLC1A1P43005 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SLC1A1P43005 CTBP2P2-201ENST00000434549 1334 ntBASIC9.45□□□□□ -0.9
SLC1A1P43005 ATF7IP-221ENST00000543189 4887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SLC1A1P43005 ARID5B-202ENST00000309334 3141 ntTSL 5 BASIC9.45□□□□□ -0.9
SLC1A1P43005 RBFOX1-203ENST00000355637 3321 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SLC1A1P43005 LIPM-201ENST00000404743 1439 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SLC1A1P43005 HHLA1-202ENST00000434736 2369 ntAPPRIS P5 TSL 5 BASIC9.45□□□□□ -0.9
SLC1A1P43005 AMPH-202ENST00000356264 3418 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
SLC1A1P43005 ZNF432-201ENST00000221315 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SLC1A1P43005 HSPD1P6-201ENST00000388967 1683 ntBASIC9.45□□□□□ -0.9
SLC1A1P43005 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
SLC1A1P43005 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SLC1A1P43005 DPF3-203ENST00000541685 4077 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SLC1A1P43005 LINC00486-201ENST00000414054 1794 ntTSL 4 BASIC9.45□□□□□ -0.9
SLC1A1P43005 AC120114.1-201ENST00000450909 1762 ntTSL 3 BASIC9.45□□□□□ -0.9
SLC1A1P43005 NOS1-203ENST00000344089 4340 ntTSL 5 BASIC9.45□□□□□ -0.9
SLC1A1P43005 MCM3-205ENST00000596288 3169 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SLC1A1P43005 LINC00598-214ENST00000637523 1943 ntTSL 5 BASIC9.44□□□□□ -0.9
SLC1A1P43005 TCAF1-201ENST00000355951 3343 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SLC1A1P43005 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
SLC1A1P43005 PDE1A-203ENST00000409365 2034 ntTSL 5 BASIC9.44□□□□□ -0.9
SLC1A1P43005 ZSCAN9-204ENST00000527436 2062 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SLC1A1P43005 PDLIM5-222ENST00000615540 6219 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SLC1A1P43005 HAUS2-201ENST00000260372 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SLC1A1P43005 SP140L-201ENST00000243810 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
SLC1A1P43005 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
SLC1A1P43005 TNPO3-205ENST00000627585 4514 ntTSL 2 BASIC9.44□□□□□ -0.9
SLC1A1P43005 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
SLC1A1P43005 GRIA1-202ENST00000340592 3170 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SLC1A1P43005 RAB36-201ENST00000263116 3828 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SLC1A1P43005 TAC1-201ENST00000319273 1239 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
SLC1A1P43005 PTMA-201ENST00000341369 1212 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
SLC1A1P43005 KCNIP2-204ENST00000353068 684 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SLC1A1P43005 SPANXC-201ENST00000358993 387 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SLC1A1P43005 CFTRP3-201ENST00000376400 212 ntBASIC9.44□□□□□ -0.9
SLC1A1P43005 MIR1208-201ENST00000408334 73 ntBASIC9.44□□□□□ -0.9
SLC1A1P43005 AC245452.3-201ENST00000413294 162 ntBASIC9.44□□□□□ -0.9
SLC1A1P43005 OR14L1P-201ENST00000419087 918 ntBASIC9.44□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms