RNA–Protein interactions for RNA: ENST00000587184.5

LAMA3-207, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,007 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-207ENST00000587184 NISCHQ9Y2I1 1504 aa18.38■□□□□ 0.53
LAMA3-207ENST00000587184 DCAF8L2P0C7V8 631 aa16.48■□□□□ 0.23
LAMA3-207ENST00000587184 SHROOM4Q9ULL8 1493 aa15.85■□□□□ 0.13
LAMA3-207ENST00000587184 CCDC180Q9P1Z9 1646 aa15.68■□□□□ 0.1
LAMA3-207ENST00000587184 SUPT5HO00267 1087 aaKnown RBP15.56■□□□□ 0.08
LAMA3-207ENST00000587184 ABCC9O60706 1549 aa15.46■□□□□ 0.07
LAMA3-207ENST00000587184 ZCCHC6Q5VYS8 1495 aaKnown RBP15.34■□□□□ 0.05
LAMA3-207ENST00000587184 DCAF1Q9Y4B6 1507 aa14.95□□□□□ -0.02
LAMA3-207ENST00000587184 NACADO15069 1562 aa14.88□□□□□ -0.03
LAMA3-207ENST00000587184 SCRIBQ14160 1630 aa14.87□□□□□ -0.03
LAMA3-207ENST00000587184 PABPN1Q86U42 306 aaKnown RBP eCLIP14.86□□□□□ -0.03
LAMA3-207ENST00000587184 RB1CC1Q8TDY2 1594 aa14.84□□□□□ -0.03
LAMA3-207ENST00000587184 MYO15BQ96JP2 1530 aa14.71□□□□□ -0.05
LAMA3-207ENST00000587184 TRIM41Q8WV44 630 aa14.56□□□□□ -0.08
LAMA3-207ENST00000587184 CHIC1Q5VXU3 224 aa14.48□□□□□ -0.09
LAMA3-207ENST00000587184 FAM9AQ8IZU1 332 aaPredicted RBP14.47□□□□□ -0.09
LAMA3-207ENST00000587184 EHMT2Q96KQ7 1210 aa14.45□□□□□ -0.1
LAMA3-207ENST00000587184 RSF1Q96T23 1441 aaPredicted RBP14.42□□□□□ -0.1
LAMA3-207ENST00000587184 CECR2Q9BXF3 1484 aa14.35□□□□□ -0.11
LAMA3-207ENST00000587184 BAZ1AQ9NRL2 1556 aaPredicted RBP14.29□□□□□ -0.12
LAMA3-207ENST00000587184 MROH2BQ7Z745 1585 aa14.21□□□□□ -0.13
LAMA3-207ENST00000587184 UBTFP17480 764 aaKnown RBP14.12□□□□□ -0.15
LAMA3-207ENST00000587184 LOC105371045A0A1W2PR82 267 aa14.1□□□□□ -0.15
LAMA3-207ENST00000587184 BAZ1BQ9UIG0 1483 aaKnown RBP14.1□□□□□ -0.15
LAMA3-207ENST00000587184 WIZO95785 1651 aa14.03□□□□□ -0.16
LAMA3-207ENST00000587184 SMARCA4P51532 1647 aa14.03□□□□□ -0.16
LAMA3-207ENST00000587184 RANGAP1P46060 587 aaPredicted RBP14.02□□□□□ -0.17
LAMA3-207ENST00000587184 APLP2Q06481 763 aa14.01□□□□□ -0.17
LAMA3-207ENST00000587184 SMARCA2P51531 1590 aa14□□□□□ -0.17
LAMA3-207ENST00000587184 TOP2AP11388 1531 aaKnown RBP13.94□□□□□ -0.18
LAMA3-207ENST00000587184 ATAD2BQ9ULI0 1458 aa13.94□□□□□ -0.18
LAMA3-207ENST00000587184 BICRAQ9NZM4 1560 aa13.94□□□□□ -0.18
LAMA3-207ENST00000587184 CCDC88BA6NC98 1476 aa13.93□□□□□ -0.18
LAMA3-207ENST00000587184 UNC13AQ9UPW8 1703 aa13.87□□□□□ -0.19
LAMA3-207ENST00000587184 CSRNP3Q8WYN3 585 aa13.86□□□□□ -0.19
LAMA3-207ENST00000587184 PCGF6Q9BYE7 350 aa13.86□□□□□ -0.19
LAMA3-207ENST00000587184 TTBK1Q5TCY1 1321 aaPredicted RBP13.85□□□□□ -0.19
LAMA3-207ENST00000587184 EIF4G1Q04637 1599 aaKnown RBP13.82□□□□□ -0.2
LAMA3-207ENST00000587184 WRNQ14191 1432 aaPredicted RBP eCLIP13.81□□□□□ -0.2
LAMA3-207ENST00000587184 ATP1B4Q9UN42 357 aaPredicted RBP13.77□□□□□ -0.21
LAMA3-207ENST00000587184 NCAPD3P42695 1498 aa13.77□□□□□ -0.21
LAMA3-207ENST00000587184 PPARGC1BQ86YN6 1023 aaKnown RBP13.73□□□□□ -0.21
LAMA3-207ENST00000587184 ABCC8Q09428 1581 aa13.68□□□□□ -0.22
LAMA3-207ENST00000587184 TRIM26Q12899 539 aaPredicted RBP13.67□□□□□ -0.22
LAMA3-207ENST00000587184 EEA1Q15075 1411 aa13.67□□□□□ -0.22
LAMA3-207ENST00000587184 CADPSQ9ULU8 1353 aa13.67□□□□□ -0.22
LAMA3-207ENST00000587184 HMGXB3Q12766 1538 aa13.61□□□□□ -0.23
LAMA3-207ENST00000587184 CC2D2AQ9P2K1 1620 aa13.6□□□□□ -0.23
LAMA3-207ENST00000587184 PEG3Q9GZU2 1588 aa13.59□□□□□ -0.23
LAMA3-207ENST00000587184 SOGA1O94964 1423 aa13.57□□□□□ -0.24
LAMA3-207ENST00000587184 PDS5BQ9NTI5 1447 aa13.57□□□□□ -0.24
LAMA3-207ENST00000587184 KIF27Q86VH2 1401 aa13.57□□□□□ -0.24
LAMA3-207ENST00000587184 FBLN2P98095 1184 aa13.54□□□□□ -0.24
LAMA3-207ENST00000587184 GOLGA3Q08378 1498 aa13.51□□□□□ -0.25
LAMA3-207ENST00000587184 ERCC6Q03468 1493 aa13.51□□□□□ -0.25
LAMA3-207ENST00000587184 CEP164Q9UPV0 1460 aa13.48□□□□□ -0.25
LAMA3-207ENST00000587184 CFTRP13569 1480 aa13.48□□□□□ -0.25
LAMA3-207ENST00000587184 FANCD2Q9BXW9 1451 aa13.48□□□□□ -0.25
LAMA3-207ENST00000587184 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.47□□□□□ -0.25
LAMA3-207ENST00000587184 HNRNPUL2Q1KMD3 747 aaKnown RBP13.47□□□□□ -0.25
LAMA3-207ENST00000587184 P3H3Q8IVL6 736 aa13.47□□□□□ -0.25
LAMA3-207ENST00000587184 CUX2O14529 1486 aa13.46□□□□□ -0.25
LAMA3-207ENST00000587184 CCER1Q8TC90 406 aaPredicted RBP13.46□□□□□ -0.25
LAMA3-207ENST00000587184 TNIKQ9UKE5 1360 aa13.46□□□□□ -0.26
LAMA3-207ENST00000587184 CLIP1P30622 1438 aa13.42□□□□□ -0.26
LAMA3-207ENST00000587184 CEP162Q5TB80 1403 aa13.42□□□□□ -0.26
LAMA3-207ENST00000587184 ZEB1P37275 1124 aaPredicted RBP13.42□□□□□ -0.26
LAMA3-207ENST00000587184 CARMIL1Q5VZK9 1371 aa13.38□□□□□ -0.27
LAMA3-207ENST00000587184 RUSC2Q8N2Y8 1516 aa13.37□□□□□ -0.27
LAMA3-207ENST00000587184 ITGAEP38570 1179 aa13.37□□□□□ -0.27
LAMA3-207ENST00000587184 CHMP7Q8WUX9 453 aaPredicted RBP13.37□□□□□ -0.27
LAMA3-207ENST00000587184 DNAJC5BQ9UF47 199 aa13.37□□□□□ -0.27
LAMA3-207ENST00000587184 NESP48681 1621 aa13.36□□□□□ -0.27
LAMA3-207ENST00000587184 TDRD9Q8NDG6 1382 aaKnown RBP13.34□□□□□ -0.27
LAMA3-207ENST00000587184 SYNJ1O43426 1573 aa13.33□□□□□ -0.28
LAMA3-207ENST00000587184 FGD5Q6ZNL6 1462 aa13.31□□□□□ -0.28
LAMA3-207ENST00000587184 HRCP23327 699 aa13.28□□□□□ -0.28
LAMA3-207ENST00000587184 TOP2BQ02880 1626 aa13.27□□□□□ -0.29
LAMA3-207ENST00000587184 FAM50AQ14320 339 aaKnown RBP13.27□□□□□ -0.29
LAMA3-207ENST00000587184 CUX1P39880 1505 aa13.26□□□□□ -0.29
LAMA3-207ENST00000587184 RAPGEF2Q9Y4G8 1499 aa13.25□□□□□ -0.29
LAMA3-207ENST00000587184 LAMC3Q9Y6N6 1575 aa13.25□□□□□ -0.29
LAMA3-207ENST00000587184 ARID3CA6NKF2 412 aa13.24□□□□□ -0.29
LAMA3-207ENST00000587184 RAD54L2Q9Y4B4 1467 aa13.24□□□□□ -0.29
LAMA3-207ENST00000587184 IGF1RP08069 1367 aa13.22□□□□□ -0.29
LAMA3-207ENST00000587184 TOPBP1Q92547 1522 aa13.21□□□□□ -0.3
LAMA3-207ENST00000587184 CDK11AQ9UQ88 783 aaPredicted RBP13.2□□□□□ -0.3
LAMA3-207ENST00000587184 DNMBPQ6XZF7 1577 aa13.16□□□□□ -0.3
LAMA3-207ENST00000587184 MRC2Q9UBG0 1479 aa13.16□□□□□ -0.3
LAMA3-207ENST00000587184 GAPVD1Q14C86 1478 aa13.16□□□□□ -0.3
LAMA3-207ENST00000587184 POLA1P09884 1462 aaPredicted RBP13.16□□□□□ -0.3
LAMA3-207ENST00000587184 VPS8Q8N3P4 1428 aa13.15□□□□□ -0.3
LAMA3-207ENST00000587184 FHAD1B1AJZ9 1412 aa13.12□□□□□ -0.31
LAMA3-207ENST00000587184 MTUS2Q5JR59 1369 aa13.12□□□□□ -0.31
LAMA3-207ENST00000587184 KIF21BO75037 1637 aa13.1□□□□□ -0.31
LAMA3-207ENST00000587184 AQRO60306 1485 aaKnown RBP eCLIP13.09□□□□□ -0.31
LAMA3-207ENST00000587184 BIVM-ERCC5R4GMW8 1640 aa13.09□□□□□ -0.31
LAMA3-207ENST00000587184 PRXQ9BXM0 1461 aa13.08□□□□□ -0.32
LAMA3-207ENST00000587184 MYT1LQ9UL68 1186 aa13.07□□□□□ -0.32
LAMA3-207ENST00000587184 ERICH3Q5RHP9 1530 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms