RNA–Protein interactions for RNA: ENST00000443425.6

LRRC49-203, Transcript of leucine rich repeat containing 49, humanhuman

TSL 2 BASIC

Gene LRRC49, Length 3,085 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-203ENST00000443425 NISCHQ9Y2I1 1504 aa17.16■□□□□ 0.34
LRRC49-203ENST00000443425 SHROOM4Q9ULL8 1493 aa15.54■□□□□ 0.08
LRRC49-203ENST00000443425 SUPT5HO00267 1087 aaKnown RBP15.42■□□□□ 0.06
LRRC49-203ENST00000443425 HRCP23327 699 aa15.18■□□□□ 0.02
LRRC49-203ENST00000443425 PPARGC1BQ86YN6 1023 aaKnown RBP15.14■□□□□ 0.01
LRRC49-203ENST00000443425 PCGF6Q9BYE7 350 aa15.13■□□□□ 0.01
LRRC49-203ENST00000443425 MYO15BQ96JP2 1530 aa15.04■□□□□ -0
LRRC49-203ENST00000443425 CHIC1Q5VXU3 224 aa14.93□□□□□ -0.02
LRRC49-203ENST00000443425 DCAF8L2P0C7V8 631 aa14.79□□□□□ -0.04
LRRC49-203ENST00000443425 LOC105371045A0A1W2PR82 267 aa14.75□□□□□ -0.05
LRRC49-203ENST00000443425 ZCCHC6Q5VYS8 1495 aaKnown RBP14.55□□□□□ -0.08
LRRC49-203ENST00000443425 TRIM26Q12899 539 aaPredicted RBP14.46□□□□□ -0.09
LRRC49-203ENST00000443425 DCAF1Q9Y4B6 1507 aa14.45□□□□□ -0.1
LRRC49-203ENST00000443425 EHMT2Q96KQ7 1210 aa14.45□□□□□ -0.1
LRRC49-203ENST00000443425 SCAF1Q9H7N4 1312 aaKnown RBP14.4□□□□□ -0.1
LRRC49-203ENST00000443425 FAM9AQ8IZU1 332 aaPredicted RBP14.33□□□□□ -0.11
LRRC49-203ENST00000443425 PELP1Q8IZL8 1130 aaKnown RBP14.27□□□□□ -0.13
LRRC49-203ENST00000443425 CCDC180Q9P1Z9 1646 aa14.26□□□□□ -0.13
LRRC49-203ENST00000443425 ZEB1P37275 1124 aaPredicted RBP14.18□□□□□ -0.14
LRRC49-203ENST00000443425 TRIM41Q8WV44 630 aa14.13□□□□□ -0.15
LRRC49-203ENST00000443425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.08□□□□□ -0.16
LRRC49-203ENST00000443425 NEUROD1Q13562 356 aa14.07□□□□□ -0.16
LRRC49-203ENST00000443425 TTBK1Q5TCY1 1321 aaPredicted RBP14.04□□□□□ -0.16
LRRC49-203ENST00000443425 ACIN1Q9UKV3 1341 aaKnown RBP14□□□□□ -0.17
LRRC49-203ENST00000443425 GTF3C3Q9Y5Q9 886 aa13.99□□□□□ -0.17
LRRC49-203ENST00000443425 CCER1Q8TC90 406 aaPredicted RBP13.98□□□□□ -0.17
LRRC49-203ENST00000443425 DIEXFQ68CQ4 756 aaKnown RBP13.89□□□□□ -0.19
LRRC49-203ENST00000443425 YTHDC1Q96MU7 727 aaKnown RBP13.86□□□□□ -0.19
LRRC49-203ENST00000443425 RSF1Q96T23 1441 aaPredicted RBP13.85□□□□□ -0.19
LRRC49-203ENST00000443425 RB1CC1Q8TDY2 1594 aa13.84□□□□□ -0.19
LRRC49-203ENST00000443425 CENPBP07199 599 aaPredicted RBP13.82□□□□□ -0.2
LRRC49-203ENST00000443425 ABCC9O60706 1549 aa13.81□□□□□ -0.2
LRRC49-203ENST00000443425 SCRIBQ14160 1630 aa13.77□□□□□ -0.2
LRRC49-203ENST00000443425 CECR2Q9BXF3 1484 aa13.59□□□□□ -0.23
LRRC49-203ENST00000443425 MYT1Q01538 1121 aa13.58□□□□□ -0.24
LRRC49-203ENST00000443425 MIER1Q8N108 512 aa13.58□□□□□ -0.24
LRRC49-203ENST00000443425 ZNF316A6NFI3 1004 aaPredicted RBP13.57□□□□□ -0.24
LRRC49-203ENST00000443425 HNRNPUL2Q1KMD3 747 aaKnown RBP13.53□□□□□ -0.24
LRRC49-203ENST00000443425 MROH2BQ7Z745 1585 aa13.5□□□□□ -0.25
LRRC49-203ENST00000443425 UBTFP17480 764 aaKnown RBP13.48□□□□□ -0.25
LRRC49-203ENST00000443425 WIZO95785 1651 aa13.47□□□□□ -0.25
LRRC49-203ENST00000443425 CEP162Q5TB80 1403 aa13.45□□□□□ -0.26
LRRC49-203ENST00000443425 ABCC8Q09428 1581 aa13.44□□□□□ -0.26
LRRC49-203ENST00000443425 RANGAP1P46060 587 aaPredicted RBP13.43□□□□□ -0.26
LRRC49-203ENST00000443425 CCDC88BA6NC98 1476 aa13.41□□□□□ -0.26
LRRC49-203ENST00000443425 SOGA1O94964 1423 aa13.4□□□□□ -0.26
LRRC49-203ENST00000443425 RUSC2Q8N2Y8 1516 aa13.34□□□□□ -0.27
LRRC49-203ENST00000443425 WRNQ14191 1432 aaPredicted RBP eCLIP13.33□□□□□ -0.28
LRRC49-203ENST00000443425 CSRNP3Q8WYN3 585 aa13.29□□□□□ -0.28
LRRC49-203ENST00000443425 SUPT16HQ9Y5B9 1047 aaKnown RBP13.27□□□□□ -0.28
LRRC49-203ENST00000443425 TNIKQ9UKE5 1360 aa13.27□□□□□ -0.29
LRRC49-203ENST00000443425 BCANQ96GW7 911 aa13.24□□□□□ -0.29
LRRC49-203ENST00000443425 EIF4G1Q04637 1599 aaKnown RBP13.23□□□□□ -0.29
LRRC49-203ENST00000443425 BAZ1AQ9NRL2 1556 aaPredicted RBP13.21□□□□□ -0.29
LRRC49-203ENST00000443425 APLP2Q06481 763 aa13.19□□□□□ -0.3
LRRC49-203ENST00000443425 TSHZ2Q9NRE2 1034 aa13.19□□□□□ -0.3
LRRC49-203ENST00000443425 KCNH8Q96L42 1107 aa13.17□□□□□ -0.3
LRRC49-203ENST00000443425 GOLGA3Q08378 1498 aa13.14□□□□□ -0.31
LRRC49-203ENST00000443425 NACADO15069 1562 aa13.12□□□□□ -0.31
LRRC49-203ENST00000443425 CLIP1P30622 1438 aa13.11□□□□□ -0.31
LRRC49-203ENST00000443425 ITGAEP38570 1179 aa13.1□□□□□ -0.31
LRRC49-203ENST00000443425 ANP32EQ9BTT0 268 aa13.1□□□□□ -0.31
LRRC49-203ENST00000443425 SMARCA2P51531 1590 aa13.08□□□□□ -0.32
LRRC49-203ENST00000443425 TOP2AP11388 1531 aaKnown RBP13.07□□□□□ -0.32
LRRC49-203ENST00000443425 BCL11AQ9H165 835 aa13.06□□□□□ -0.32
LRRC49-203ENST00000443425 DHX57Q6P158 1386 aaKnown RBP13.03□□□□□ -0.32
LRRC49-203ENST00000443425 EEA1Q15075 1411 aa13.03□□□□□ -0.32
LRRC49-203ENST00000443425 FKBP8Q14318 412 aa13.03□□□□□ -0.32
LRRC49-203ENST00000443425 VPS8Q8N3P4 1428 aa13.02□□□□□ -0.33
LRRC49-203ENST00000443425 KANK4Q5T7N3 995 aaPredicted RBP13□□□□□ -0.33
LRRC49-203ENST00000443425 RAPGEF2Q9Y4G8 1499 aa12.99□□□□□ -0.33
LRRC49-203ENST00000443425 CEP164Q9UPV0 1460 aa12.99□□□□□ -0.33
LRRC49-203ENST00000443425 PABPN1Q86U42 306 aaKnown RBP eCLIP12.99□□□□□ -0.33
LRRC49-203ENST00000443425 HIRIP3Q9BW71 556 aaPredicted RBP12.98□□□□□ -0.33
LRRC49-203ENST00000443425 SMARCA4P51532 1647 aa12.98□□□□□ -0.33
LRRC49-203ENST00000443425 DDX10Q13206 875 aaKnown RBP12.95□□□□□ -0.34
LRRC49-203ENST00000443425 CLSPNQ9HAW4 1339 aa12.95□□□□□ -0.34
LRRC49-203ENST00000443425 TRIM52Q96A61 297 aa12.94□□□□□ -0.34
LRRC49-203ENST00000443425 SYNJ1O43426 1573 aa12.93□□□□□ -0.34
LRRC49-203ENST00000443425 KIF21BO75037 1637 aa12.91□□□□□ -0.34
LRRC49-203ENST00000443425 RBM19Q9Y4C8 960 aaKnown RBP12.89□□□□□ -0.35
LRRC49-203ENST00000443425 SIN3AQ96ST3 1273 aa12.86□□□□□ -0.35
LRRC49-203ENST00000443425 NEFLP07196 543 aa12.85□□□□□ -0.35
LRRC49-203ENST00000443425 IRX6P78412 446 aaPredicted RBP12.84□□□□□ -0.35
LRRC49-203ENST00000443425 MSH5O43196 834 aa12.79□□□□□ -0.36
LRRC49-203ENST00000443425 ARAP1Q96P48 1450 aa12.78□□□□□ -0.36
LRRC49-203ENST00000443425 RAB3GAP2Q9H2M9 1393 aa12.78□□□□□ -0.36
LRRC49-203ENST00000443425 BAZ1BQ9UIG0 1483 aaKnown RBP12.78□□□□□ -0.36
LRRC49-203ENST00000443425 CCNB3Q8WWL7 1395 aa12.77□□□□□ -0.36
LRRC49-203ENST00000443425 FAM50AQ14320 339 aaKnown RBP12.76□□□□□ -0.37
LRRC49-203ENST00000443425 ATP1B4Q9UN42 357 aaPredicted RBP12.75□□□□□ -0.37
LRRC49-203ENST00000443425 UNC13AQ9UPW8 1703 aa12.73□□□□□ -0.37
LRRC49-203ENST00000443425 WDR97A6NE52 1622 aa12.73□□□□□ -0.37
LRRC49-203ENST00000443425 RRBP1Q9P2E9 1410 aaKnown RBP12.72□□□□□ -0.37
LRRC49-203ENST00000443425 ANP32CO43423 234 aa12.71□□□□□ -0.37
LRRC49-203ENST00000443425 MAPKBP1O60336 1514 aa12.71□□□□□ -0.38
LRRC49-203ENST00000443425 ERICH6Q7L0X2 663 aa12.7□□□□□ -0.38
LRRC49-203ENST00000443425 PPP1R15AO75807 674 aaPredicted RBP12.7□□□□□ -0.38
LRRC49-203ENST00000443425 P3H3Q8IVL6 736 aa12.68□□□□□ -0.38
LRRC49-203ENST00000443425 HNRNPUQ00839 825 aaKnown RBP eCLIP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms