Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
LSM2Q9Y333 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM2Q9Y333 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LSM2Q9Y333 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.22■□□□□ 0.51
LSM2Q9Y333 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM2Q9Y333 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.22■□□□□ 0.51
LSM2Q9Y333 AC009299.2-201ENST00000482477 511 ntBASIC18.22■□□□□ 0.51
LSM2Q9Y333 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.22■□□□□ 0.51
LSM2Q9Y333 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LSM2Q9Y333 AL356740.2-201ENST00000601559 647 ntBASIC18.22■□□□□ 0.51
LSM2Q9Y333 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM2Q9Y333 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM2Q9Y333 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM2Q9Y333 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.22■□□□□ 0.51
LSM2Q9Y333 AC009237.3-201ENST00000393279 1427 ntBASIC18.22■□□□□ 0.51
LSM2Q9Y333 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM2Q9Y333 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM2Q9Y333 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.22■□□□□ 0.51
LSM2Q9Y333 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM2Q9Y333 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.22■□□□□ 0.51
LSM2Q9Y333 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.22■□□□□ 0.51
LSM2Q9Y333 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.22■□□□□ 0.51
LSM2Q9Y333 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM2Q9Y333 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.21■□□□□ 0.51
LSM2Q9Y333 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.21■□□□□ 0.51
LSM2Q9Y333 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM2Q9Y333 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LSM2Q9Y333 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM2Q9Y333 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
LSM2Q9Y333 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LSM2Q9Y333 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.21■□□□□ 0.51
LSM2Q9Y333 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM2Q9Y333 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.21■□□□□ 0.51
LSM2Q9Y333 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.21■□□□□ 0.51
LSM2Q9Y333 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.21■□□□□ 0.51
LSM2Q9Y333 MIR3621-201ENST00000580529 85 ntBASIC18.21■□□□□ 0.51
LSM2Q9Y333 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
LSM2Q9Y333 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.21■□□□□ 0.51
LSM2Q9Y333 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LSM2Q9Y333 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LSM2Q9Y333 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
LSM2Q9Y333 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM2Q9Y333 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM2Q9Y333 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LSM2Q9Y333 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
LSM2Q9Y333 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.21■□□□□ 0.51
LSM2Q9Y333 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.21■□□□□ 0.51
LSM2Q9Y333 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM2Q9Y333 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LSM2Q9Y333 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM2Q9Y333 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM2Q9Y333 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.2■□□□□ 0.5
LSM2Q9Y333 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM2Q9Y333 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.2■□□□□ 0.5
LSM2Q9Y333 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LSM2Q9Y333 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM2Q9Y333 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM2Q9Y333 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LSM2Q9Y333 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LSM2Q9Y333 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LSM2Q9Y333 AC133561.4-201ENST00000566112 224 ntBASIC18.2■□□□□ 0.5
LSM2Q9Y333 AL512631.2-201ENST00000604634 923 ntBASIC18.2■□□□□ 0.5
LSM2Q9Y333 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.2■□□□□ 0.5
LSM2Q9Y333 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.2■□□□□ 0.5
LSM2Q9Y333 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM2Q9Y333 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.2■□□□□ 0.5
LSM2Q9Y333 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
LSM2Q9Y333 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM2Q9Y333 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
LSM2Q9Y333 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM2Q9Y333 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.2■□□□□ 0.5
LSM2Q9Y333 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.19■□□□□ 0.5
LSM2Q9Y333 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM2Q9Y333 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.19■□□□□ 0.5
LSM2Q9Y333 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM2Q9Y333 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM2Q9Y333 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LSM2Q9Y333 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.19■□□□□ 0.5
LSM2Q9Y333 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LSM2Q9Y333 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LSM2Q9Y333 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LSM2Q9Y333 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM2Q9Y333 KRT16P3-201ENST00000439127 1283 ntBASIC18.19■□□□□ 0.5
LSM2Q9Y333 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM2Q9Y333 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.19■□□□□ 0.5
LSM2Q9Y333 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LSM2Q9Y333 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM2Q9Y333 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LSM2Q9Y333 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.19■□□□□ 0.5
LSM2Q9Y333 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LSM2Q9Y333 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.19■□□□□ 0.5
LSM2Q9Y333 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LSM2Q9Y333 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LSM2Q9Y333 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LSM2Q9Y333 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.19■□□□□ 0.5
LSM2Q9Y333 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
LSM2Q9Y333 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSM2Q9Y333 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LSM2Q9Y333 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.18■□□□□ 0.5
LSM2Q9Y333 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms