Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.15■□□□□ 0.02
ODF3Q96PU9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ODF3Q96PU9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC15.15■□□□□ 0.02
ODF3Q96PU9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.02
ODF3Q96PU9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ODF3Q96PU9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ODF3Q96PU9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.14■□□□□ 0.01
ODF3Q96PU9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.14■□□□□ 0.01
ODF3Q96PU9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
ODF3Q96PU9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC15.14■□□□□ 0.01
ODF3Q96PU9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ODF3Q96PU9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ODF3Q96PU9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.14■□□□□ 0.01
ODF3Q96PU9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ODF3Q96PU9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ODF3Q96PU9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ODF3Q96PU9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ODF3Q96PU9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
ODF3Q96PU9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.14■□□□□ 0.01
ODF3Q96PU9 AC091799.1-201ENST00000422823 811 ntBASIC15.14■□□□□ 0.01
ODF3Q96PU9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC15.14■□□□□ 0.01
ODF3Q96PU9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.14■□□□□ 0.01
ODF3Q96PU9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ODF3Q96PU9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.14■□□□□ 0.01
ODF3Q96PU9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.14■□□□□ 0.01
ODF3Q96PU9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
ODF3Q96PU9 AC019069.1-201ENST00000610008 1333 ntBASIC15.14■□□□□ 0.01
ODF3Q96PU9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
ODF3Q96PU9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ODF3Q96PU9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.13■□□□□ 0.01
ODF3Q96PU9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.13■□□□□ 0.01
ODF3Q96PU9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ODF3Q96PU9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.13■□□□□ 0.01
ODF3Q96PU9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ODF3Q96PU9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.13■□□□□ 0.01
ODF3Q96PU9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
ODF3Q96PU9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.13■□□□□ 0.01
ODF3Q96PU9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ODF3Q96PU9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ODF3Q96PU9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC15.13■□□□□ 0.01
ODF3Q96PU9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ODF3Q96PU9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ODF3Q96PU9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ODF3Q96PU9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.13■□□□□ 0.01
ODF3Q96PU9 AC097381.1-201ENST00000429019 1296 ntBASIC15.13■□□□□ 0.01
ODF3Q96PU9 CDV3P1-201ENST00000471403 739 ntBASIC15.13■□□□□ 0.01
ODF3Q96PU9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ODF3Q96PU9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.13■□□□□ 0.01
ODF3Q96PU9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.13■□□□□ 0.01
ODF3Q96PU9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15.13■□□□□ 0.01
ODF3Q96PU9 FAM21FP-204ENST00000608637 956 ntBASIC15.13■□□□□ 0.01
ODF3Q96PU9 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.13■□□□□ 0.01
ODF3Q96PU9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ODF3Q96PU9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.13■□□□□ 0.01
ODF3Q96PU9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ODF3Q96PU9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ODF3Q96PU9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.13■□□□□ 0.01
ODF3Q96PU9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ODF3Q96PU9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ODF3Q96PU9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ODF3Q96PU9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ODF3Q96PU9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ODF3Q96PU9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ODF3Q96PU9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.12■□□□□ 0.01
ODF3Q96PU9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ODF3Q96PU9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
ODF3Q96PU9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ODF3Q96PU9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ODF3Q96PU9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC15.12■□□□□ 0.01
ODF3Q96PU9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ODF3Q96PU9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ODF3Q96PU9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ODF3Q96PU9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
ODF3Q96PU9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ODF3Q96PU9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ODF3Q96PU9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ODF3Q96PU9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC15.12■□□□□ 0.01
ODF3Q96PU9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.12■□□□□ 0.01
ODF3Q96PU9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.12■□□□□ 0.01
ODF3Q96PU9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ODF3Q96PU9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ODF3Q96PU9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ODF3Q96PU9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ODF3Q96PU9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ODF3Q96PU9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ODF3Q96PU9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ODF3Q96PU9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC15.11■□□□□ 0.01
ODF3Q96PU9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ODF3Q96PU9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ODF3Q96PU9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ODF3Q96PU9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
ODF3Q96PU9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.11■□□□□ 0.01
ODF3Q96PU9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.11■□□□□ 0.01
ODF3Q96PU9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ODF3Q96PU9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
ODF3Q96PU9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC15.11■□□□□ 0.01
ODF3Q96PU9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ODF3Q96PU9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ODF3Q96PU9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ODF3Q96PU9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms